| Entry | SW_score | bits | identity | overlap |
| cthe:Chro_0078 | 284 | 70.5 | 0.222 | 558 |
| cthe:Chro_0711 | 484 | 116.1 | 0.244 | 554 |
| cthe:Chro_1884 | 246 | 61.9 | 0.241 | 477 |
| cthe:Chro_1925 | 324 | 79.7 | 0.240 | 559 |
| cthe:Chro_2126 | 231 | 58.5 | 0.219 | 565 |
| cthe:Chro_2576 | 179 | 46.6 | 0.311 | 132 |
| cthe:Chro_2579 | 242 | 61.0 | 0.222 | 568 |
| cthe:Chro_2580 | 251 | 63.0 | 0.223 | 668 |
| cthe:Chro_2976 | 2137 | 492.9 | 0.513 | 661 |
| cthe:Chro_3309 | 592 | 140.7 | 0.247 | 676 |
| cthe:Chro_3652 | 529 | 126.4 | 0.252 | 548 |
| cthe:Chro_3658 | 264 | 66.0 | 0.244 | 393 |
| cthe:Chro_3660 | 219 | 55.7 | 0.242 | 363 |
| cthe:Chro_3661 | 260 | 65.1 | 0.212 | 614 |
| cthe:Chro_3664 | 315 | 77.6 | 0.224 | 544 |
| cthe:Chro_3719 | 310 | 76.5 | 0.222 | 563 |
| cthe:Chro_3723 | 303 | 74.9 | 0.227 | 590 |
| cthe:Chro_3725 | 349 | 85.3 | 0.223 | 636 |
| cthe:Chro_3726 | 282 | 70.1 | 0.211 | 587 |
| cthe:Chro_3727 | 346 | 84.7 | 0.225 | 605 |
| cthe:Chro_3729 | 260 | 65.1 | 0.227 | 534 |
| cthe:Chro_3730 | 312 | 76.9 | 0.235 | 550 |