| Entry | SW_score | bits | identity | overlap |
| pmad:BAY61_00225 | 378 | 92.0 | 0.263 | 316 |
| pmad:BAY61_27110 | 345 | 84.4 | 0.278 | 270 |
| pmad:BAY61_23875 | 341 | 83.5 | 0.269 | 286 |
| pmad:BAY61_03620 | 338 | 82.8 | 0.294 | 296 |
| pmad:BAY61_10520 | 324 | 79.7 | 0.273 | 253 |
| pmad:BAY61_03190 | 322 | 79.2 | 0.292 | 325 |
| pmad:BAY61_10515 | 320 | 78.7 | 0.291 | 223 |
| pmad:BAY61_19320 | 298 | 73.7 | 0.263 | 236 |
| pmad:BAY61_11330 | 284 | 70.5 | 0.249 | 249 |
| pmad:BAY61_27135 | 283 | 70.3 | 0.272 | 294 |
| pmad:BAY61_08975 | 283 | 70.3 | 0.264 | 216 |
| pmad:BAY61_28185 | 274 | 68.3 | 0.265 | 260 |
| pmad:BAY61_05410 | 270 | 67.3 | 0.237 | 300 |
| pmad:BAY61_00230 | 265 | 66.2 | 0.254 | 276 |
| pmad:BAY61_29975 | 253 | 63.5 | 0.286 | 259 |
| pmad:BAY61_27140 | 253 | 63.5 | 0.253 | 292 |
| pmad:BAY61_05325 | 251 | 63.0 | 0.237 | 266 |
| pmad:BAY61_22380 | 238 | 60.0 | 0.230 | 318 |
| pmad:BAY61_21910 | 231 | 58.5 | 0.251 | 279 |
| pmad:BAY61_14005 | 226 | 57.3 | 0.281 | 228 |
| pmad:BAY61_03185 | 205 | 52.5 | 0.275 | 200 |