| Entry | SW_score | bits | identity | overlap |
| pol:Bpro_0052 | 531 | 126.8 | 0.299 | 435 |
| pol:Bpro_0414 | 520 | 124.3 | 0.305 | 400 |
| pol:Bpro_0421 | 480 | 115.2 | 0.283 | 441 |
| pol:Bpro_0900 | 473 | 113.6 | 0.289 | 401 |
| pol:Bpro_1133 | 439 | 105.9 | 0.303 | 330 |
| pol:Bpro_1467 | 413 | 99.9 | 0.344 | 334 |
| pol:Bpro_2003 | 548 | 130.7 | 0.319 | 382 |
| pol:Bpro_2912 | 1577 | 365.3 | 0.575 | 414 |
| pol:Bpro_3572 | 693 | 163.8 | 0.330 | 427 |
| pol:Bpro_4286 | 427 | 103.1 | 0.269 | 461 |
| pol:Bpro_4366 | 130 | 35.4 | 0.322 | 149 |