| Entry | SW_score | bits | identity | overlap |
| ypd:YPD4_3472 | 473 | 113.6 | 0.199 | 2333 |
| ypd:YPD4_0526 | 353 | 86.3 | 0.195 | 2117 |
| ypd:YPD4_0690 | 309 | 76.2 | 0.192 | 2217 |
| ypd:YPD4_2176 | 301 | 74.4 | 0.185 | 2058 |
| ypd:YPD4_3274 | 249 | 62.6 | 0.172 | 1461 |
| ypd:YPD4_2841 | 247 | 62.1 | 0.194 | 1223 |
| ypd:YPD4_1590 | 217 | 55.3 | 0.222 | 562 |
| ypd:YPD4_pMT0004 | 200 | 51.4 | 0.180 | 997 |
| ypd:YPD4_0444 | 195 | 50.2 | 0.255 | 278 |