| Entry | SW_score | bits | identity | overlap |
| ypj:CH55_2623 | 547 | 130.5 | 0.207 | 2194 |
| ypj:CH55_3317 | 308 | 76.0 | 0.192 | 2217 |
| ypj:CH55_2213 | 264 | 66.0 | 0.185 | 1554 |
| ypj:CH55_2212 | 260 | 65.1 | 0.196 | 878 |
| ypj:CH55_2839 | 252 | 63.2 | 0.172 | 1461 |
| ypj:CH55_1820 | 247 | 62.1 | 0.194 | 1223 |
| ypj:CH55_3638 | 230 | 58.2 | 0.210 | 677 |
| ypj:CH55_121 | 226 | 57.3 | 0.186 | 1373 |
| ypj:CH55_882 | 217 | 55.3 | 0.222 | 562 |
| ypj:CH55_4230 | 200 | 51.4 | 0.180 | 997 |
| ypj:CH55_2249 | 195 | 50.2 | 0.255 | 278 |
| ypj:CH55_4151 | 166 | 43.6 | 0.296 | 159 |