| Entry | SW_score | bits | identity | overlap |
| pol:Bpro_0052 | 547 | 130.5 | 0.299 | 421 |
| pol:Bpro_0414 | 586 | 139.4 | 0.315 | 410 |
| pol:Bpro_0421 | 495 | 118.6 | 0.302 | 417 |
| pol:Bpro_0900 | 436 | 105.2 | 0.281 | 402 |
| pol:Bpro_1133 | 545 | 130.0 | 0.363 | 350 |
| pol:Bpro_1467 | 460 | 110.7 | 0.298 | 406 |
| pol:Bpro_2003 | 585 | 139.1 | 0.339 | 383 |
| pol:Bpro_2912 | 1547 | 358.4 | 0.569 | 420 |
| pol:Bpro_3224 | 105 | 29.7 | 0.304 | 92 |
| pol:Bpro_3572 | 628 | 148.9 | 0.349 | 398 |
| pol:Bpro_4286 | 453 | 109.1 | 0.294 | 344 |