| Entry | SW_score | bits | identity | overlap |
| syf:Synpcc7942_0630 | 126 | 34.5 | 0.303 | 145 |
| syf:Synpcc7942_0878 | 108 | 30.4 | 0.308 | 78 |
| syf:Synpcc7942_0928 | 113 | 31.6 | 0.333 | 75 |
| syf:Synpcc7942_2005 | 102 | 29.0 | 0.308 | 130 |
| syf:Synpcc7942_2262 | 107 | 30.2 | 0.351 | 77 |
| syf:Synpcc7942_2450 | 139 | 37.5 | 0.346 | 104 |
| syf:Synpcc7942_2481 | 114 | 31.8 | 0.304 | 79 |
| syf:Synpcc7942_2517 | 103 | 29.3 | 0.317 | 63 |