SSDB Paralog Search Result

KEGG ID :cge:100772660 (466 a.a.)
Definition:hepatocyte nuclear factor 3-beta isoform X2; K08035 forkhead box protein A2, hepatocyte nuclear factor 3-beta
Update status:T02813 (prag : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 194 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
cge:100755899 hepatocyte nuclear factor 3-alpha isoform K09387     467     1566 (    -)     363    0.552    500      -> 
cge:113837299 hepatocyte nuclear factor 3-gamma         K08038     354      915 (    -)     214    0.411    462      -> 
cge:113835145 forkhead box protein C2                   K09396     494      637 (    -)     151    0.376    370      -> 
cge:100751108 forkhead box protein B1                   K09395     325      635 (    -)     151    0.464    224      -> 
cge:100765591 forkhead box protein B2 isoform X2        K09395     427      630 (    -)     149    0.443    235      -> 
cge:113835001 forkhead box protein C1                   K09396     554      615 (    -)     146    0.398    327      -> 
cge:100765634 LOW QUALITY PROTEIN: forkhead box protein K09401     395      577 (    -)     137    0.339    363      -> 
cge:113834122 LOW QUALITY PROTEIN: forkhead box protein K09397     443      546 (    -)     130    0.352    412      -> 
cge:113834312 forkhead box protein D2                   K09397     493      543 (    -)     130    0.369    325      -> 
cge:113833990 forkhead box protein D3                   K09397     473      513 (    -)     123    0.353    337      -> 
cge:113834298 forkhead box protein E3                   K09398     288      503 (    -)     121    0.374    286      -> 
cge:100760759 forkhead box protein I2                   K09401     328      499 (    -)     120    0.325    382      -> 
cge:100770103 forkhead box protein L1                   K09405     336      496 (    -)     119    0.350    309      -> 
cge:100767484 forkhead box protein I1 isoform X2        K09401     370      490 (    -)     118    0.354    271      -> 
cge:100757169 forkhead box protein F1 isoform X2        K09399     378      486 (    -)     117    0.347    314      -> 
cge:100755669 forkhead box protein S1                   K09412     329      482 (    -)     116    0.338    320      -> 
cge:100760156 forkhead box protein F2 isoform X2        K09399     446      472 (    -)     113    0.365    285      -> 
cge:103164575 forkhead box protein D4-like isoform X2   K09397     435      470 (    -)     113    0.497    149      -> 
cge:100759136 forkhead box protein J3 isoform X1        K09403     621      455 (    -)     110    0.315    330      -> 
cge:100762710 forkhead box protein G1 isoform X2        K09385     479      454 (    -)     109    0.310    381      -> 
cge:113835002 forkhead box protein Q1                   K09410     399      442 (    -)     107    0.320    338      -> 
cge:100755106 forkhead box protein J1                   K09402     421      387 (    -)      94    0.294    337      -> 
cge:100770362 forkhead box protein I2                              216      380 (    -)      92    0.423    168      -> 
cge:100752578 forkhead box protein K2 isoform X2        K09404     768      376 (    -)      92    0.333    255      -> 
cge:100760801 forkhead box protein H1                   K09400     427      371 (    -)      90    0.311    283      -> 
cge:100770857 forkhead box protein J2 isoform X2        K09403     577      363 (    -)      89    0.294    309      -> 
cge:100768479 forkhead box protein K1 isoform X2        K09404     719      351 (    -)      86    0.333    207      -> 
cge:100768700 forkhead box protein N2                   K09407     429      345 (    -)      84    0.353    190      -> 
cge:100752823 forkhead box protein N4                   K09407     517      321 (    -)      79    0.270    440      -> 
cge:100769418 forkhead box protein P4 isoform X1        K09409     685      306 (    -)      76    0.276    301      -> 
cge:100770315 forkhead box protein O3                   K09408     672      303 (    -)      75    0.319    270      -> 
cge:100762193 forkhead box protein N1 isoform X3        K09407     651      297 (    -)      74    0.275    298      -> 
cge:100768709 forkhead box protein N3 isoform X1        K09407     480      291 (    -)      72    0.293    225      -> 
cge:100758558 forkhead box protein O6 isoform X2        K17847     559      290 (    -)      72    0.281    377      -> 
cge:100769341 forkhead box protein M1 isoform X1        K09406     765      282 (    -)      70    0.304    181      -> 
cge:100768647 forkhead box protein O1 isoform X2        K07201     650      277 (    -)      69    0.291    292      -> 
cge:100753762 forkhead box protein P1 isoform X1        K23582     696      273 (    -)      68    0.260    327      -> 
cge:113838358 LOW QUALITY PROTEIN: forkhead box protein            674      263 (    -)      66    0.273    264      -> 
cge:100762481 forkhead box protein P2                   K09409     718      246 (    -)      62    0.255    282      -> 
cge:100756577 forkhead box protein O4                   K12358     506      241 (    -)      61    0.254    358      -> 
cge:100757421 forkhead box protein P3                   K10163     472      239 (    -)      60    0.383    81       -> 
cge:100764480 forkhead box protein R2                              302      219 (    -)      56    0.303    122      -> 
cge:100755030 forkhead box protein R1                              324      216 (    -)      55    0.278    158      -> 
cge:100773316 LOW QUALITY PROTEIN: AT-rich interactive            2314      209 (    -)      53    0.259    451      -> 
cge:100689016 DNA-directed RNA polymerase II subunit RP K03006    1970      190 (    -)      49    0.358    137      -> 
cge:100763049 IQ motif and SEC7 domain-containing prote K12495    1114      184 (    -)      48    0.271    210      -> 
cge:100770451 CREB-binding protein isoform X3                     2440      184 (    -)      48    0.251    342      -> 
cge:100773692 RNA-binding protein 33 isoform X2                   1224      177 (    -)      46    0.306    147      -> 
cge:100769245 homeobox protein DLX-2                    K18488     332      174 (    -)      46    0.257    346      -> 
cge:100757633 SH3 and multiple ankyrin repeat domains p           2166      172 (    -)      45    0.306    144      -> 
cge:100753796 LOW QUALITY PROTEIN: SKI/DACH domain-cont            906      171 (    -)      45    0.252    270      -> 
cge:100768909 cleavage stimulation factor subunit 2 tau K14407     654      170 (    -)      45    0.277    195      -> 
cge:113834600 POU domain, class 4, transcription factor K09366     408      170 (    -)      45    0.288    170      -> 
cge:100759502 splicing factor 3B subunit 4              K12831     424      169 (    -)      44    0.260    231      -> 
cge:100764947 homeobox protein OTX1                     K09326     355      168 (    -)      44    0.250    320      -> 
cge:100764639 elongin BC and Polycomb repressive comple            373      167 (    -)      44    0.307    166      -> 
cge:100755037 collagen alpha-1(II) chain                K19719    1486      163 (    -)      43    0.261    360      -> 
cge:100769004 LOW QUALITY PROTEIN: coiled-coil domain-c            422      163 (    -)      43    0.283    180      -> 
cge:100768772 POU domain, class 6, transcription factor K09368     686      162 (    -)      43    0.263    198      -> 
cge:100770191 arginine-glutamic acid dipeptide repeats            1557      157 (    -)      42    0.266    177      -> 
cge:100752036 SWI/SNF complex subunit SMARCC2 isoform X K11649    1245      156 (    -)      41    0.269    212      -> 
cge:113835685 elastin isoform X2                                   867      156 (    -)      41    0.295    139      -> 
cge:100771403 LOW QUALITY PROTEIN: bromodomain-containi           1404      154 (    -)      41    0.262    145      -> 
cge:100774358 protein transport protein Sec24D isoform  K14007    1018      154 (    -)      41    0.316    152      -> 
cge:113835939 LOW QUALITY PROTEIN: homeobox protein eng K09319     450      154 (    -)      41    0.257    237      -> 
cge:100773181 E3 ubiquitin-protein ligase Arkadia isofo K10635     999      153 (    -)      41    0.285    130      -> 
cge:100763790 LOW QUALITY PROTEIN: myelin expression fa            591      150 (    -)      40    0.320    122      -> 
cge:100757773 nuclear fragile X mental retardation-inte            700      146 (    -)      39    0.321    81       -> 
cge:100761451 pleckstrin homology-like domain family A  K23793     412      146 (    -)      39    0.301    93       -> 
cge:100762074 keratin, type I cytoskeletal 9 isoform X2 K07604     655      140 (    -)      38    0.333    117      -> 
cge:100750951 transcription factor COE4 isoform X2                 623      139 (    -)      38    0.313    131      -> 
cge:100766797 PWWP domain-containing protein 2A isoform            725      137 (    -)      37    0.333    123      -> 
cge:100755811 collagen alpha-1(IX) chain isoform X2                920      136 (    -)      37    0.311    103      -> 
cge:100753962 histone-lysine N-methyltransferase SETD1A           1723      135 (    -)      37    0.303    99       -> 
cge:100756430 copine-1 isoform X1                                  997      135 (    -)      37    0.305    174      -> 
cge:113832622 LOW QUALITY PROTEIN: homeobox protein DLX K09314     298      135 (    -)      37    0.344    64       -> 
cge:100753214 LOW QUALITY PROTEIN: ubiquitin-conjugatin K10585     357      133 (    -)      36    0.372    86       -> 
cge:100759986 trophinin isoform X2                                1762      133 (    -)      36    0.313    134      -> 
cge:100767651 keratin, type I cytoskeletal 10 isoform X K07604     607      133 (    -)      36    0.306    111      -> 
cge:100751707 paired mesoderm homeobox protein 2B isofo K09330     314      132 (    -)      36    0.324    102      -> 
cge:100754677 LOW QUALITY PROTEIN: E3 ubiquitin-protein K10143     739      132 (    -)      36    0.370    108      -> 
cge:100761350 keratin, type I cytoskeletal 24-like isof K07604     520      132 (    -)      36    0.319    91       -> 
cge:100755645 CUGBP Elav-like family member 6 isoform X            460      131 (    -)      36    0.318    88       -> 
cge:100762440 ras GTPase-activating protein 1 isoform X K04352    1041      131 (    -)      36    0.351    94       -> 
cge:100756354 IQ motif and SEC7 domain-containing prote K12495    1191      130 (    -)      35    0.318    110      -> 
cge:100765309 regulator of G-protein signaling 12 isofo K16449    1468      130 (    -)      35    0.304    115      -> 
cge:100751022 T-cell leukemia homeobox protein 1        K09340     332      129 (    -)      35    0.322    87       -> 
cge:100769048 caskin-2 isoform X1                       K21952    1214      129 (    -)      35    0.310    100      -> 
cge:100772202 LOW QUALITY PROTEIN: doublesex- and mab-3 K19492     344      129 (    -)      35    0.307    127      -> 
cge:113833123 LOW QUALITY PROTEIN: loricrin-like                   461      129 (    -)      35    0.311    103      -> 
cge:100755078 collagen alpha-1(VI) chain                          1035      128 (    -)      35    0.311    103      -> 
cge:100757227 pulmonary surfactant-associated protein D            374      128 (    -)      35    0.308    104      -> 
cge:100759636 LOW QUALITY PROTEIN: AMME syndrome candid            342      128 (    -)      35    0.365    85       -> 
cge:100762370 desmoglein-1 isoform X2                   K07596    1080      128 (    -)      35    0.316    76       -> 
cge:100765316 keratin, type II cytoskeletal 1 isoform X K07605     633      128 (    -)      35    0.333    93       -> 
cge:100766532 cytoskeleton-associated protein 4 isoform K13999     573      128 (    -)      35    0.377    61       -> 
cge:100770088 zinc finger protein castor homolog 1 isof           1881      127 (    -)      35    0.306    85       -> 
cge:100757049 glycogen synthase kinase-3 alpha isoform  K08822     483      126 (    -)      35    0.340    97       -> 
cge:113833573 LOW QUALITY PROTEIN: putative fidgetin-li            700      126 (    -)      35    0.303    109      -> 
cge:100762627 LOW QUALITY PROTEIN: microtubule cross-li           1940      124 (    -)      34    0.305    118      -> 
cge:100751320 T-box transcription factor TBX3 isoform X K10177     743      122 (    -)      34    0.300    90       -> 
cge:100757915 glutamate receptor ionotropic, kainate 5             980      121 (    -)      33    0.357    84       -> 
cge:100761355 LOW QUALITY PROTEIN: splicing factor, pro K13219     702      121 (    -)      33    0.349    63       -> 
cge:100759302 heterogeneous nuclear ribonucleoproteins  K13158     353      120 (    -)      33    0.314    102      -> 
cge:100765854 CCR4-NOT transcription complex subunit 3  K12580     753      120 (    -)      33    0.308    91       -> 
cge:113835059 proline-rich protein 7                               271      120 (    -)      33    0.344    61       -> 
cge:100769929 LOW QUALITY PROTEIN: transcription initia           1052      119 (    -)      33    0.310    100      -> 
cge:100760367 LOW QUALITY PROTEIN: oxysterol-binding pr K20456     805      118 (    -)      33    0.347    75       -> 
cge:100765286 ubiquitin carboxyl-terminal hydrolase 31            1347      118 (    -)      33    0.327    101      -> 
cge:100759153 U1 small nuclear ribonucleoprotein C isof K11095     159      117 (    -)      33    0.386    44       -> 
cge:100760786 LOW QUALITY PROTEIN: dachshund homolog 1             709      116 (    -)      32    0.311    90       -> 
cge:100760893 FH2 domain-containing protein 1                     1148      116 (    -)      32    0.348    89       -> 
cge:100765919 spastin isoform X4                        K13254     614      116 (    -)      32    0.351    77       -> 
cge:100770721 lysine-specific histone demethylase 1A is            986      116 (    -)      32    0.306    124      -> 
cge:103159499 fos-related antigen 1                     K04502     279      116 (    -)      32    0.306    98       -> 
cge:113835060 LOW QUALITY PROTEIN: G protein-regulated             933      116 (    -)      32    0.320    97       -> 
cge:113837301 myb-related transcription factor, partner            394      116 (    -)      32    0.302    126      -> 
cge:100756473 MICAL-like protein 1 isoform X2           K19948     850      115 (    -)      32    0.338    80       -> 
cge:100756511 dual 3',5'-cyclic-AMP and -GMP phosphodie            935      115 (    -)      32    0.319    91       -> 
cge:100764704 disheveled-associated activator of morpho           1067      115 (    -)      32    0.306    121      -> 
cge:100768344 heterogeneous nuclear ribonucleoprotein L K13159     624      115 (    -)      32    0.352    71       -> 
cge:100768798 LOW QUALITY PROTEIN: pantothenate kinase  K09680     550      115 (    -)      32    0.330    100      -> 
cge:100750568 testis-specific Y-encoded-like protein 4  K11287     409      114 (    -)      32    0.305    118      -> 
cge:100753141 LOW QUALITY PROTEIN: single-minded homolo K09100     661      114 (    -)      32    0.305    95       -> 
cge:100759446 PR domain zinc finger protein 1 isoform X            825      114 (    -)      32    0.301    83       -> 
cge:100772369 serine/threonine-protein kinase BRSK1 iso            778      114 (    -)      32    0.343    70       -> 
cge:100773829 synergin gamma isoform X7                           1362      114 (    -)      32    0.308    104      -> 
cge:113836408 putative transmembrane protein INAFM2                150      114 (    -)      32    0.350    80       -> 
cge:100751083 fidgetin isoform X1                                  825      113 (    -)      32    0.300    190      -> 
cge:100756483 FYVE, RhoGEF and PH domain-containing pro K05723     953      113 (    -)      32    0.321    106      -> 
cge:100767576 complement C1q-like protein 3 isoform X2  K23284     255      113 (    -)      32    0.333    75       -> 
cge:100771792 embryonal Fyn-associated substrate                   559      113 (    -)      32    0.310    87       -> 
cge:100772704 egl nine homolog 1 isoform X2             K09592     401      113 (    -)      32    0.352    91       -> 
cge:100771386 ATP-dependent RNA helicase DDX42 isoform  K12835     928      112 (    -)      31    0.324    139      -> 
cge:100774859 MAPK-interacting and spindle-stabilizing             331      112 (    -)      31    0.302    179      -> 
cge:100754235 DDB1- and CUL4-associated factor 10 isofo K11802     562      111 (    -)      31    0.378    74       -> 
cge:100769166 complement C1q-like protein 4             K23284     238      111 (    -)      31    0.329    76       -> 
cge:100770205 rho-related BTB domain-containing protein            727      111 (    -)      31    0.435    46       -> 
cge:100772607 E3 ubiquitin-protein ligase UBR3 isoform  K11978    2300      111 (    -)      31    0.301    103      -> 
cge:113831162 guanine nucleotide-binding protein G(s) s            875      111 (    -)      31    0.313    99       -> 
cge:100751815 homeobox protein Meis1 isoform X1         K15613     465      110 (    -)      31    0.342    73       -> 
cge:100752132 metal regulatory transcription factor 1 i K23317     687      110 (    -)      31    0.345    87       -> 
cge:100761131 kielin/chordin-like protein                         1577      110 (    -)      31    0.304    92       -> 
cge:100762600 palladin isoform X2                       K22029    1408      110 (    -)      31    0.330    112      -> 
cge:107980094 uncharacterized protein C3orf86 homolog              160      110 (    -)      31    0.313    83       -> 
cge:100758113 NUT family member 2 isoform X2                       769      108 (    -)      30    0.348    69       -> 
cge:100761947 OTU domain-containing protein 5 isoform X K12655     567      108 (    -)      30    0.330    88       -> 
cge:113837297 dystrophia myotonica WD repeat-containing            674      108 (    -)      30    0.322    90       -> 
cge:100757083 myozenin-1                                           297      107 (    -)      30    0.322    90       -> 
cge:100759259 keratin, type I cytoskeletal 15           K07604     457      107 (    -)      30    0.397    73       -> 
cge:113837075 LOW QUALITY PROTEIN: endogenous retroviru            500      107 (    -)      30    0.384    73       -> 
cge:100752649 ras and Rab interactor 3 isoform X3       K23687    1047      106 (    -)      30    0.329    82       -> 
cge:113837294 LOW QUALITY PROTEIN: homeobox protein SIX K19474     733      106 (    -)      30    0.333    90       -> 
cge:100754630 keratin, type II cytoskeletal 71 isoform  K07605     524      105 (    -)      30    0.306    111      -> 
cge:100761643 LOW QUALITY PROTEIN: calcium-dependent se K19933    1355      105 (    -)      30    0.343    70       -> 
cge:100762237 PR domain zinc finger protein 4 isoform X K12463     802      105 (    -)      30    0.300    120      -> 
cge:100764723 serine/threonine-protein kinase WNK2 isof K08867    2224      105 (    -)      30    0.317    82       -> 
cge:100770232 cytoplasmic polyadenylation element-bindi K02602     715      105 (    -)      30    0.308    91       -> 
cge:100774604 nuclear factor NF-kappa-B p100 subunit is K04469     902      105 (    -)      30    0.439    57       -> 
cge:100765004 disheveled-associated activator of morpho           1068      104 (    -)      30    0.310    100      -> 
cge:100767684 transcription factor 4 isoform X2                    675      104 (    -)      30    0.305    95       -> 
cge:100772463 abl interactor 1 isoform X2               K23649     480      104 (    -)      30    0.316    79       -> 
cge:113832712 uncharacterized protein LOC113832712                 356      104 (    -)      30    0.333    87       -> 
cge:100756675 ubiquitin carboxyl-terminal hydrolase 34            3557      103 (    -)      29    0.361    36       -> 
cge:100760130 myelin regulatory factor-like protein                915      103 (    -)      29    0.307    153      -> 
cge:100761229 transcription elongation factor SPT6                1725      103 (    -)      29    0.333    81       -> 
cge:100769762 caskin-1 isoform X3                       K21952    1430      103 (    -)      29    0.310    84       -> 
cge:100774139 coiled-coil domain-containing protein 86  K14822     335      103 (    -)      29    0.325    83       -> 
cge:107977024 occludin/ELL domain-containing protein 1             244      103 (    -)      29    0.303    132      -> 
cge:113833746 serine/arginine repetitive matrix protein            436      103 (    -)      29    0.304    112      -> 
cge:113836790 LOW QUALITY PROTEIN: transcription factor K09087     226      103 (    -)      29    0.321    84       -> 
cge:100754410 LOW QUALITY PROTEIN: beta-2-syntrophin is            525      102 (    -)      29    0.301    73       -> 
cge:100755290 UBX domain-containing protein 10                     282      102 (    -)      29    0.404    47       -> 
cge:100755421 serine/threonine-protein kinase mTOR                2549      102 (    -)      29    0.333    72       -> 
cge:100762026 nuclear envelope pore membrane protein PO           1201      102 (    -)      29    0.304    92       -> 
cge:100764080 interferon alpha-inducible protein 27, mi            222      102 (    -)      29    0.304    92       -> 
cge:103164350 LOW QUALITY PROTEIN: serine/threonine-pro           1424      102 (    -)      29    0.305    95       -> 
cge:113837620 paraneoplastic antigen Ma6F-like isoform             776      102 (    -)      29    0.323    96       -> 
cge:100754779 WW domain-binding protein 11              K12866     641      101 (    -)      29    0.304    79       -> 
cge:100756379 paired box protein Pax-9 isoform X2       K09382     506      101 (    -)      29    0.302    139      -> 
cge:100764061 RNA-binding protein 27 isoform X3         K13193    1059      101 (    -)      29    0.319    69       -> 
cge:100770289 E3 ubiquitin-protein ligase ZNRF1 isoform K10694     227      101 (    -)      29    0.314    70       -> 
cge:100772166 LOW QUALITY PROTEIN: uncharacterized prot           1220      101 (    -)      29    0.358    53       -> 
cge:113833392 transcription factor jun-D                           341      101 (    -)      29    0.307    101      -> 
cge:113833833 collagen alpha-1(I) chain-like                       260      101 (    -)      29    0.324    74       -> 
cge:100751847 LOW QUALITY PROTEIN: ankyrin repeat domai K21437     543      100 (    -)      29    0.424    33       -> 
cge:100752072 keratin, type II cytoskeletal 72 isoform  K07605     520      100 (    -)      29    0.304    112      -> 
cge:100753157 SEC23-interacting protein isoform X1                 996      100 (    -)      29    0.321    84       -> 
cge:100755562 zinc finger protein 618 isoform X2                  1087      100 (    -)      29    0.315    92       -> 
cge:100757943 RING finger protein 112 isoform X1                   631      100 (    -)      29    0.417    60       -> 
cge:100758294 late cornified envelope protein 5A isofor            177      100 (    -)      29    0.341    82       -> 
cge:100759839 LOW QUALITY PROTEIN: protein phosphatase  K17555     203      100 (    -)      29    0.324    105      -> 
cge:100767862 glyceraldehyde-3-phosphate dehydrogenase, K10705     417      100 (    -)      29    0.362    47       -> 
cge:113835688 LOW QUALITY PROTEIN: serine/arginine repe            648      100 (    -)      29    0.324    71       -> 

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