SSDB Paralog Search Result

KEGG ID :nle:100600191 (587 a.a.)
Definition:APOBEC1 complementation factor isoform X2
Update status:T03265 (actw,agd,agv,alg,alq,amar,arac,bez,bgz,bman,bof,brf,cek,chit,chrm,crs,day,dein,dic,djj,dou,ebv,echg,eex,elk,fmi,fnf,glu,gmr,gti,hhk,hhz,hmi,hol,kuy,lgt,lne,lyj,lyk,marj,metf,mff,mgk,mmaa,mmak,mmao,ncu,nfv,ngf,nik,niw,noi,nst,ock,oct,oli,otr,pacr,paut,peh,peu,prag,prd,psyh,psyo,pxv,ree,rfs,rhf,rhg,rid,rmuc,rul,salz,seqi,serw,smus,snn,sper,sphz,spik,thec,thet,vnl : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 59 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
nle:100580002 probable RNA-binding protein 46 isoform X            533     1695 (    -)     392    0.511    538      -> 
nle:100586006 RNA-binding protein 47 isoform X3                    524     1615 (    -)     374    0.652    376      -> 
nle:100579672 heterogeneous nuclear ribonucleoprotein Q K13160     562     1139 (    -)     265    0.453    408      -> 
nle:100580968 heterogeneous nuclear ribonucleoprotein R K13161     532     1120 (    -)     261    0.444    426      -> 
nle:100604987 dead end protein homolog 1                           353      613 (    -)     146    0.425    207      -> 
nle:100607129 polyadenylate-binding protein 4-like      K13126     428      279 (    -)      69    0.283    286      -> 
nle:100604028 polyadenylate-binding protein 4 isoform X K13126     644      275 (    -)      69    0.232    479      -> 
nle:100581403 polyadenylate-binding protein 3           K13126     638      243 (    -)      61    0.249    366      -> 
nle:100595778 polyadenylate-binding protein 1           K13126     636      240 (    -)      61    0.260    362      -> 
nle:100600602 polyadenylate-binding protein 5           K13126     382      222 (    -)      56    0.266    278      -> 
nle:100594852 polyadenylate-binding protein 1-like isof K13126     619      216 (    -)      55    0.258    252      -> 
nle:100587840 ribonucleoprotein PTB-binding 2 isoform X            698      213 (    -)      54    0.278    277      -> 
nle:100604965 CUGBP Elav-like family member 4 isoform X K13207     506      212 (    -)      54    0.232    362      -> 
nle:100596814 CUGBP Elav-like family member 3 isoform X K13207     467      203 (    -)      52    0.280    186      -> 
nle:100588873 non-POU domain-containing octamer-binding K13214     471      193 (    -)      50    0.262    225      -> 
nle:100580043 ELAV-like protein 2 isoform X8            K13208     359      191 (    -)      49    0.250    256      -> 
nle:100601276 CUGBP Elav-like family member 6 isoform X K13207     481      188 (    -)      49    0.287    188      -> 
nle:100598843 RNA-binding protein 4B isoform X1         K13187     359      179 (    -)      47    0.257    276      -> 
nle:100605826 RNA-binding protein 39 isoform X1         K13091     530      172 (    -)      45    0.378    82       -> 
nle:100581450 CUGBP Elav-like family member 1 isoform X K13207     514      170 (    -)      45    0.253    194      -> 
nle:100596583 putative RNA-binding protein 15B          K13190     891      170 (    -)      45    0.299    201      -> 
nle:100586673 CUGBP Elav-like family member 2 isoform X K13207     526      169 (    -)      44    0.253    217      -> 
nle:100591795 heterogeneous nuclear ribonucleoprotein A K12741     379      167 (    -)      44    0.263    167      -> 
nle:100598038 RNA-binding protein 4 isoform X4          K13187     143      165 (    -)      43    0.281    160      -> 
nle:100595916 RNA-binding protein 3 isoform X2          K13186     157      164 (    -)      43    0.350    117      -> 
nle:100605145 RNA-binding motif protein, X-linked-like- K12885     393      162 (    -)      43    0.292    195      -> 
nle:100582679 probable RNA-binding protein 23 isoform X            426      160 (    -)      42    0.302    126      -> 
nle:100603140 cold-inducible RNA-binding protein isofor K13195     207      159 (    -)      42    0.359    103      -> 
nle:100604875 heterogeneous nuclear ribonucleoprotein A K13044     332      159 (    -)      42    0.260    196      -> 
nle:100605160 RNA-binding motif, single-stranded-intera            437      159 (    -)      42    0.264    129      -> 
nle:100588134 paraspeckle component 1 isoform X1                   592      158 (    -)      42    0.251    231      -> 
nle:100585449 CUGBP Elav-like family member 5 isoform X K13207     485      156 (    -)      41    0.330    88       -> 
nle:100598331 THO complex subunit 4                     K12881     264      154 (    -)      41    0.311    148      -> 
nle:100590163 heterogeneous nuclear ribonucleoprotein M K12887     730      152 (    -)      40    0.267    221      -> 
nle:100602260 serine/arginine-rich splicing factor 2    K12891     221      151 (    -)      40    0.342    111      -> 
nle:100588164 heterogeneous nuclear ribonucleoprotein D K13044     355      150 (    -)      40    0.250    160      -> 
nle:100587255 collagen alpha-6(IV) chain isoform X3     K06237    1687      137 (    -)      37    0.314    121      -> 
nle:100595872 RNA-binding motif protein, X chromosome              391      135 (    -)      37    0.379    66       -> 
nle:100584402 splicing factor 3B subunit 6              K12833     125      134 (    -)      36    0.306    108      -> 
nle:100584933 probable RNA-binding protein 18 isoform X            190      129 (    -)      35    0.348    69       -> 
nle:100587166 RNA-binding protein 34                    K14837     430      123 (    -)      34    0.300    130      -> 
nle:100587720 serine/arginine-rich splicing factor 7 is K12896     238      122 (    -)      34    0.307    88       -> 
nle:100587770 serine/arginine-rich splicing factor 6    K12893     344      122 (    -)      34    0.330    88       -> 
nle:100586169 U1 small nuclear ribonucleoprotein A      K11091     282      118 (    -)      33    0.319    113      -> 
nle:100591378 splicing factor U2AF 65 kDa subunit isofo K12837     475      118 (    -)      33    0.301    83       -> 
nle:100580369 RNA-binding protein 41 isoform X1                    437      114 (    -)      32    0.333    81       -> 
nle:100581587 serine/arginine-rich splicing factor 10 i K12900     183      111 (    -)      31    0.303    76       -> 
nle:100605590 peptidyl-prolyl cis-trans isomerase E iso K09564     301      111 (    -)      31    0.301    83       -> 
nle:100579901 Nance-Horan syndrome protein isoform X1             1452      110 (    -)      31    0.330    97       -> 
nle:100580935 polymerase delta-interacting protein 3 is K22414     421      110 (    -)      31    0.312    93       -> 
nle:100598946 peroxisome proliferator-activated recepto K17963    1666      110 (    -)      31    0.362    80       -> 
nle:100603557 transformer-2 protein homolog alpha isofo K12897     282      109 (    -)      31    0.330    100      -> 
nle:100588259 collagen alpha-5(IV) chain                K06237    1685      107 (    -)      30    0.321    106      -> 
nle:100579646 biorientation of chromosomes in cell divi            185      106 (    -)      30    0.320    100      -> 
nle:100591831 protein PRRC2C isoform X10                          2815      102 (    -)      29    0.319    116      -> 
nle:100591947 RNA-binding protein Nova-1 isoform X1     K14944     507      102 (    -)      29    0.343    105      -> 
nle:100594391 tRNA selenocysteine 1-associated protein             287      102 (    -)      29    0.312    80       -> 
nle:100597513 filamin-A isoform X1                      K04437    2647      102 (    -)      29    0.301    146      -> 
nle:100583858 nuclear factor related to kappa-B-binding K11671    1323      100 (    -)      29    0.326    92       -> 

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