SSDB Paralog Search Result

KEGG ID :sfm:108937809 (965 a.a.)
Definition:DNA ligase 1 isoform X1; K10747 DNA ligase 1
Update status:T04919 (afla,ans,aoce,bman,brr,btab,cale,cov,cox,cpaf,daq,ebg,ecog,elk,emt,eof,euz,fbe,fsm,gcr,gez,hpit,lcq,lyg,mboh,mbur,nmel,padl,pcad,peu,rcn,rsz,ruj,salk,spae,sutk,syl,thes,vem,vun,xbc : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
Threshold:
  

Search Result : 111 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
sfm:108928279 DNA ligase 3                              K10776    1008      639 (    -)     152    0.248    778      -> 
sfm:108919978 DNA ligase 4                              K10777     909      489 (    -)     117    0.245    660      -> 
sfm:108927516 neurofilament heavy polypeptide           K04574     588      241 (    -)      61    0.266    334      -> 
sfm:108921750 titin-like isoform X1                               2029      225 (    -)      57    0.247    320      -> 
sfm:108918174 chromodomain-helicase-DNA-binding protein K14435    2007      200 (    -)      51    0.219    471      -> 
sfm:108921081 ensconsin isoform X1                      K10433     803      182 (    -)      47    0.251    355      -> 
sfm:108938110 adenomatous polyposis coli protein-like i K02085    2764      180 (    -)      47    0.253    289      -> 
sfm:108919911 chromatin assembly factor 1 subunit A iso K10750     875      171 (    -)      45    0.304    194      -> 
sfm:108921044 A-kinase anchor protein 12-like           K16528    2070      170 (    -)      45    0.262    309      -> 
sfm:108921827 neurofilament medium polypeptide-like     K04573     473      169 (    -)      44    0.282    170      -> 
sfm:108924238 titin-like                                K12567   29349      169 (    -)      44    0.256    293      -> 
sfm:108924882 espin-like                                           853      169 (    -)      44    0.259    297      -> 
sfm:108941303 ubiquitin carboxyl-terminal hydrolase 8 i K11839    1083      166 (    -)      44    0.254    232      -> 
sfm:108935365 centrosome and spindle pole associated pr K16771    1242      165 (    -)      43    0.260    265      -> 
sfm:108920461 SH3 domain-containing RING finger protein K12171     736      163 (    -)      43    0.273    242      -> 
sfm:108930349 zinc finger and BTB domain-containing pro K10502     760      158 (    -)      42    0.253    387      -> 
sfm:108921728 AP-3 complex subunit delta-1-like isoform K12396    1245      156 (    -)      41    0.251    259      -> 
sfm:108927425 histone-lysine N-methyltransferase SETD2  K11423    2876      153 (    -)      41    0.253    194      -> 
sfm:108931539 transcription initiation factor TFIID sub K14650     963      153 (    -)      41    0.323    133      -> 
sfm:108921133 A-kinase anchor protein 12-like           K16528    1257      151 (    -)      40    0.266    286      -> 
sfm:108924166 regulation of nuclear pre-mRNA domain-con           1298      150 (    -)      40    0.265    238      -> 
sfm:108932426 bromodomain and WD repeat-containing prot K11798    2253      150 (    -)      40    0.252    353      -> 
sfm:108934822 ataxin-2 isoform X1                                 1105      141 (    -)      38    0.319    91       -> 
sfm:108918897 mitochondrial antiviral-signaling protein K12648     499      139 (    -)      38    0.432    74       -> 
sfm:108924783 nuclear envelope pore membrane protein PO K14316    1082      136 (    -)      37    0.398    83       -> 
sfm:108918738 leiomodin-2 isoform X1                    K22030     549      135 (    -)      37    0.318    110      -> 
sfm:108925625 proteasomal ubiquitin receptor ADRM1      K06691     417      131 (    -)      36    0.319    69       -> 
sfm:108938402 whirlin-like                              K21879     920      130 (    -)      35    0.311    132      -> 
sfm:108932168 CLOCK-interacting pacemaker-like                     352      128 (    -)      35    0.307    153      -> 
sfm:108922326 microtubule-associated protein 2-like     K10430    1849      127 (    -)      35    0.353    85       -> 
sfm:108920945 TBC1 domain family member 30 isoform X1              778      126 (    -)      35    0.328    116      -> 
sfm:108918342 LOW QUALITY PROTEIN: ras-associated and p K23488    1485      125 (    -)      34    0.311    122      -> 
sfm:108937742 LOW QUALITY PROTEIN: GREB1-like protein             1955      124 (    -)      34    0.307    114      -> 
sfm:108927827 nuclear factor 1 B-type-like isoform X1   K09169     568      123 (    -)      34    0.318    85       -> 
sfm:108921781 collagen alpha-1(X) chain-like isoform X1 K19479     656      121 (    -)      33    0.333    57       -> 
sfm:108929717 uncharacterized protein LOC108929717 isof           3525      120 (    -)      33    0.319    91       -> 
sfm:108930109 eosinophil peroxidase-like                           914      119 (    -)      33    0.368    57       -> 
sfm:108935984 UPF0606 protein KIAA1549-like isoform X1            1600      119 (    -)      33    0.343    102      -> 
sfm:108936260 homeobox protein cut-like 2 isoform X1    K09313    1347      119 (    -)      33    0.307    140      -> 
sfm:108928858 chromobox protein homolog 6-like          K11453     568      118 (    -)      33    0.303    122      -> 
sfm:108930550 FYN-binding protein-like isoform X1       K17698     589      118 (    -)      33    0.304    161      -> 
sfm:108934057 LOW QUALITY PROTEIN: PERQ amino acid-rich K18730    1005      118 (    -)      33    0.354    82       -> 
sfm:108935763 semaphorin-4D-like isoform X1             K06521     906      118 (    -)      33    0.351    74       -> 
sfm:108937841 chromatin assembly factor 1 subunit B     K10751     585      118 (    -)      33    0.330    88       -> 
sfm:108933309 WAS/WASL-interacting protein family membe K19475     392      116 (    -)      32    0.300    70       -> 
sfm:108927934 protein TANC1 isoform X1                            1860      115 (    -)      32    0.330    88       -> 
sfm:108938874 collagen alpha-1(XVI) chain                         1639      115 (    -)      32    0.319    69       -> 
sfm:108940314 low molecular weight neuronal intermediat K04572     467      115 (    -)      32    0.333    84       -> 
sfm:108920318 protein transport protein Sec24A-like iso K14007    1139      114 (    -)      32    0.358    67       -> 
sfm:108937932 teashirt homolog 3-like                   K09236    1099      114 (    -)      32    0.322    115      -> 
sfm:108938545 junction-mediating and -regulatory protei            900      114 (    -)      32    0.312    125      -> 
sfm:108941615 testisin-like                                        368      114 (    -)      32    0.338    65       -> 
sfm:108942193 transcription factor E2F7                 K09391     814      114 (    -)      32    0.316    79       -> 
sfm:108928315 nuclear factor of activated T-cells, cyto K17333    1015      113 (    -)      32    0.318    88       -> 
sfm:108933420 nuclear pore complex protein Nup153 isofo K14296    1530      113 (    -)      32    0.340    97       -> 
sfm:108933716 zinc finger MIZ domain-containing protein K22403     722      113 (    -)      32    0.330    112      -> 
sfm:108922000 collagen alpha-3(IX) chain-like           K08131     943      112 (    -)      31    0.308    107      -> 
sfm:108923918 uncharacterized protein C7orf50 homolog              272      112 (    -)      31    0.305    95       -> 
sfm:108938814 tudor domain-containing protein 7 isoform K18405    1090      112 (    -)      31    0.301    83       -> 
sfm:108934735 testis-specific Y-encoded-like protein 1  K11285     593      109 (    -)      31    0.353    102      -> 
sfm:108920638 ras-associated and pleckstrin homology do K23488    1292      107 (    -)      30    0.321    81       -> 
sfm:108924308 acidic leucine-rich nuclear phosphoprotei K18647     269      107 (    -)      30    0.306    98       -> 
sfm:108932400 serine/threonine-protein kinase D2 isofor K06070     714      107 (    -)      30    0.378    45       -> 
sfm:108920349 calmodulin-binding transcription activato K21596    1844      106 (    -)      30    0.308    104      -> 
sfm:108926115 protein SZT2 isoform X1                   K23298    3706      106 (    -)      30    0.319    94       -> 
sfm:108928716 homeobox protein otx5 isoform X1                     303      106 (    -)      30    0.338    68       -> 
sfm:108929189 hepatocyte nuclear factor 3-beta-like     K08035     370      106 (    -)      30    0.318    88       -> 
sfm:108934011 zinc finger CCHC domain-containing protei K22700    1068      106 (    -)      30    0.307    75       -> 
sfm:108919053 nuclear factor 1 A-type isoform X1        K09168     528      105 (    -)      30    0.300    80       -> 
sfm:108921587 platelet glycoprotein Ib alpha chain-like            265      105 (    -)      30    0.318    66       -> 
sfm:108925750 protein transport protein Sec24D isoform  K14007    1045      105 (    -)      30    0.314    70       -> 
sfm:108926059 ran GTPase-activating protein 1-like      K14319     597      105 (    -)      30    0.300    90       -> 
sfm:108928750 transcription elongation factor SPT5 isof K15172    1086      105 (    -)      30    0.301    73       -> 
sfm:108931763 CCR4-NOT transcription complex subunit 3- K12580     897      105 (    -)      30    0.347    72       -> 
sfm:108935201 nuclear factor 1 A-type-like              K09168     520      105 (    -)      30    0.333    78       -> 
sfm:108935207 serine/threonine-protein phosphatase 2A r K11583    1141      105 (    -)      30    0.412    51       -> 
sfm:108936707 lipopolysaccharide-responsive and beige-l           2794      105 (    -)      30    0.301    73       -> 
sfm:108938540 collagen alpha-1(V) chain                 K19721    1951      105 (    -)      30    0.300    80       -> 
sfm:108941608 ryanodine receptor 1-like isoform X1      K04961    5087      105 (    -)      30    0.331    121      -> 
sfm:108925192 CUGBP Elav-like family member 3 isoform X K13207     456      104 (    -)      30    0.311    74       -> 
sfm:108925744 CCR4-NOT transcription complex subunit 3  K12580     930      104 (    -)      30    0.320    97       -> 
sfm:108930202 adenylate cyclase type 9-like             K08049    1326      104 (    -)      30    0.308    65       -> 
sfm:108931742 5'-AMP-activated protein kinase subunit g K07200     463      104 (    -)      30    0.326    92       -> 
sfm:108934311 Sjoegren syndrome/scleroderma autoantigen            242      104 (    -)      30    0.304    135      -> 
sfm:108934561 protein CBFA2T3                           K22752     665      104 (    -)      30    0.314    105      -> 
sfm:108940160 LOW QUALITY PROTEIN: rho GTPase-activatin K20638     872      104 (    -)      30    0.385    65       -> 
sfm:108922587 dynamin-1-like                            K01528     830      103 (    -)      29    0.345    58       -> 
sfm:108925421 calnexin                                  K08054     599      103 (    -)      29    0.321    81       -> 
sfm:108927895 collagen alpha-1(XXVIII) chain-like                 1193      103 (    -)      29    0.322    59       -> 
sfm:108936113 UV excision repair protein RAD23 homolog  K10839     381      103 (    -)      29    0.450    40       -> 
sfm:108939268 homeobox protein Hox-C4                   K09304     271      103 (    -)      29    0.310    100      -> 
sfm:108939879 ubinuclein-2-like                         K17492    1085      103 (    -)      29    0.308    107      -> 
sfm:108924993 junction-mediating and -regulatory protei            737      102 (    -)      29    0.333    78       -> 
sfm:108930453 collagen alpha-1(II) chain-like isoform X K19719    1420      102 (    -)      29    0.304    56       -> 
sfm:108933130 LOW QUALITY PROTEIN: autism susceptibilit K23214     843      102 (    -)      29    0.375    64       -> 
sfm:108935411 nuclear receptor coactivator 2            K11255    1429      102 (    -)      29    0.309    68       -> 
sfm:108940675 centrosomal protein of 192 kDa isoform X1 K16725    2676      102 (    -)      29    0.356    73       -> 
sfm:108921083 uncharacterized protein LOC108921083 isof K12484    1546      101 (    -)      29    0.348    69       -> 
sfm:108925331 nuclear pore glycoprotein p62             K14306     556      101 (    -)      29    0.317    63       -> 
sfm:108930907 lysyl oxidase homolog 3-like              K00280     833      101 (    -)      29    0.312    64       -> 
sfm:108933541 M-phase inducer phosphatase 1-like isofor            423      101 (    -)      29    0.301    83       -> 
sfm:108935045 histone-binding protein N1/N2-like isofor K11291     492      101 (    -)      29    0.305    141      -> 
sfm:108936520 RNA-binding protein 12                               889      101 (    -)      29    0.302    86       -> 
sfm:108937784 transmembrane protein 108                            425      101 (    -)      29    0.330    109      -> 
sfm:108939318 formin-like protein 3 isoform X1                    1079      101 (    -)      29    0.312    80       -> 
sfm:108926131 transcription activator BRG1 isoform X1   K11647    1631      100 (    -)      29    0.333    60       -> 
sfm:108926448 proteasomal ubiquitin receptor ADRM1-like K06691     404      100 (    -)      29    0.323    62       -> 
sfm:108927356 collagen alpha-1(XXVIII) chain-like                 1088      100 (    -)      29    0.310    58       -> 
sfm:108932726 formin-2-like                             K02184    1542      100 (    -)      29    0.328    64       -> 
sfm:108933133 collagen alpha-1(VIII) chain              K23455     738      100 (    -)      29    0.339    56       -> 
sfm:108934728 guanylate-binding protein 1-like          K20899     418      100 (    -)      29    0.309    139      -> 

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]