SSDB Paralog Search Result

KEGG ID :vvi:100256907 (782 a.a.)
Definition:DNA ligase 1; K10747 DNA ligase 1
Update status:T01084 (agi,amil,anp,bez,bgz,bman,cof,dmn,elk,fad,fnf,hhk,labp,lgt,lhf,lug,lyj,marj,mclo,metf,mich,mick,mum,nfv,niw,noi,nst,ocd,paga,paut,peu,pkz,pot,prag,ree,rfs,rgl,rhf,rhg,rsy,sald,salz,sphz,spik,sros,sthr,talb,yti : calculation not yet completed)
Show : Best-best Best Paralogs Gene clusters
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Search Result : 28 hits

                 Entry                                       KO      len   SW-score(margin)  bits  identity overlap  best(all)
------------------------------------------------------------------ -------------------------------------------------------------
vvi:100266816 DNA ligase 6                              K10747    1449     1782 (    -)     412    0.415    636      -> 
vvi:100258105 DNA ligase 4                              K10777    1162      418 (    -)     101    0.263    407      -> 
vvi:100259836 histone H1                                K11275     290      138 (    -)      37    0.306    108      -> 
vvi:100249003 uncharacterized LOC100249003                         221      134 (    -)      36    0.328    122      -> 
vvi:100246425 proline-rich receptor-like protein kinase            717      131 (    -)      36    0.319    94       -> 
vvi:100254143 receptor-like serine/threonine-protein ki           1076      126 (    -)      35    0.333    99       -> 
vvi:100255843 probable methyltransferase PMT27                     938      125 (    -)      34    0.300    120      -> 
vvi:100259596 uncharacterized LOC100259596                         582      124 (    -)      34    0.316    95       -> 
vvi:100266951 uncharacterized protein At4g04980                    816      123 (    -)      34    0.306    124      -> 
vvi:104878373 DNA mismatch repair protein MSH3          K08736     490      114 (    -)      32    0.309    68       -> 
vvi:100266933 DNA mismatch repair protein MSH3          K08736    1111      113 (    -)      32    0.309    68       -> 
vvi:100245025 fasciclin-like arabinogalactan protein 14            312      109 (    -)      31    0.323    96       -> 
vvi:100243579 villin-2                                             952      108 (    -)      30    0.316    98       -> 
vvi:100250809 uclacyanin-3                                         320      107 (    -)      30    0.302    129      -> 
vvi:100251100 probable carotenoid cleavage dioxygenase  K09840     599      106 (    -)      30    0.364    77       -> 
vvi:100266517 protein LONGIFOLIA 2                                 800      105 (    -)      30    0.309    123      -> 
vvi:104881489 high mobility group nucleosome-binding do            418      105 (    -)      30    0.319    94       -> 
vvi:100243361 quinolinate synthase, chloroplastic       K03517     742      104 (    -)      30    0.371    70       -> 
vvi:104881765 extensin-like                                        121      103 (    -)      29    0.308    120      -> 
vvi:100246204 serine/threonine-protein kinase STY17                551      102 (    -)      29    0.310    87       -> 
vvi:100253631 putative pentatricopeptide repeat-contain            764      102 (    -)      29    0.301    83       -> 
vvi:100260212 probable WRKY transcription factor 48                309      102 (    -)      29    0.301    113      -> 
vvi:100853642 uncharacterized LOC100853642                         686      102 (    -)      29    0.321    112      -> 
vvi:100245087 uncharacterized LOC100245087                         318      101 (    -)      29    0.324    71       -> 
vvi:100246571 elongation factor 1-gamma                 K03233     424      101 (    -)      29    0.318    66       -> 
vvi:100247403 4-hydroxybenzoate polyprenyltransferase,  K06125     412      100 (    -)      29    0.379    58       -> 
vvi:100254956 glutaredoxin                              K17479     268      100 (    -)      29    0.324    102      -> 
vvi:100263527 uncharacterized LOC100263527                         789      100 (    -)      29    0.328    61       -> 

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