GFIT result for T01822

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

amn:RAM_26510
(314 a.a.)
 
--
 
    ATP-dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> amd:AMED_5204(314)314100.02169(1594)6<>    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)314100.02169(1594)6<>    lig; ATP-dependent DNA ligase
> amz:B737_5142(314)314100.02169(1594)6<>    lig; ATP-dependent DNA ligase
> amyc:CU254_25885(314)31385.01860(1348)0<-    ATP-dependent DNA ligase
> ngv:CDO52_22145(317)31365.21439(1133)0<-    ATP-dependent DNA ligase
> pmad:BAY61_01235(306)30368.01414(760)0<-    ATP-dependent DNA ligase
> sen:SACE_5682(333)30864.01331(852)7--    DNA ligase, ATP-dependent
> tee:Tel_12770(335)31359.11281
0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsau:DWV08_07400(334)31558.71264
0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14150(?)31060.31262(668)0--    -
> mir:OCQ_30550(332)31060.31262(668)3<-    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)31060.31262(668)3<-    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)31060.31262(668)3<-    DNA polymerase LigD ligase subunit
> mchi:AN480_15575(332)31060.01252(658)0<-    ATP-dependent DNA ligase
> mia:OCU_29800(332)31059.71248(654)3<-    DNA polymerase LigD ligase subunit
> myo:OEM_29110(332)31059.41244(650)3<-    DNA polymerase LigD ligase subunit
> mmal:CKJ54_13680(332)31059.01243(646)0<-    ATP-dependent DNA ligase
> mav:MAV_3148(332)31059.01228(634)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(?)31059.01228(633)0--    -
> mavd:NF84_14150(?)31059.01228(633)0--    -
> mavr:LA63_14305(?)31059.01228(633)0--    -
> mao:MAP4_2518(332)31058.71226(632)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)31058.71226(632)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)31058.71226(632)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)31058.71226(632)0--    hypothetical protein
> spun:BFF78_39610(336)30561.31225(722)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_5345(337)30858.41223(808)8--    DNA polymerase LigD, ligase domain protein
> sals:SLNWT_5554(334)30459.21189(846)5-- K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grs:C7S20_03830(333)31151.81169(570)0<-    ATP-dependent DNA ligase
> sct:SCAT_5457(313)31156.61167(796)3->    ligD; DNA polymerase LigD, ligase domain
> scy:SCATT_54560(327)31156.61167(796)4->    DNA polymerase LigD ligase subunit
> bbt:BBta_7782(351)31155.31140(541)3<-    putative ATP-dependent DNA ligase
> rci:RCIX1968(353)31255.11131(886)3<-    predicted ATP-dependent DNA ligase
> saln:SALB1_1757(336)30953.11128(826)0<- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2126(334)31352.11120(894)1<-    putative ATP-dependent DNA ligase
> blin:BLSMQ_1369(316)31054.51092(536)0<-    ATP-dependent DNA ligase
> hbe:BEI_0347(334)31352.71047
0<- K01971  ligD ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lok:Loa_02405(334)30750.21015(291)1--    DNA polymerase LigD, ligase domain protein
> amq:AMETH_0282(237)22665.5997(261)5->    lig; DNA ligase, ATP-dependent
> ank:AnaeK_0832(684)31747.0884(442)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_166(342)31343.1883(603)0<-    ATP-dependent DNA ligase
> ade:Adeh_0784(658)31846.5874(431)105-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)31845.9874()0-> K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)31746.4871(438)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bot:CIT37_12965(315)31747.3870(272)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)31647.8870(532)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)31744.5857(644)1-> K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)31744.5857(644)0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> melm:C7H73_09480(840)31947.6853(600)0-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sva:SVA_1768(815)31446.2837(551)0-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_20745(315)31645.9832(6)7-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_42720(315)31645.9832(6)9--    hypothetical protein
> abac:LuPra_01460(663)31045.5829(28)0-- K01971  ligD ykoU_2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)31745.7824(565)7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axo:NH44784_059851(870)31846.5823(451)23-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_09606(855)31846.5823(219)9-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axs:LH59_19425(?)31846.5821(464)0--    -
> dpy:BA022_07305(837)31545.4820(544)0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)32746.2819(524)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axn:AX27061_4222(874)31846.2818(444)35-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axx:ERS451415_04244(874)31846.2818(444)0-> K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_08150(315)31646.2817(220)0--    DNA ligase
> scu:SCE1572_21330(687)31645.6817(464)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ajs:Ajs_2523(837)31545.4816(546)10-> K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0832(656)31744.8813(13)16-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)31744.2813()1-> K01971  ligD unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbro:BAU06_06860(884)31744.8811(581)0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_01115(881)31143.7811(118)0-> K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brad:BF49_3871(315)31645.6809(216)0--    ATPdependent DNA ligase EC 6511
> jsv:CNX70_19225(829)32146.1807(528)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nlc:EBAPG3_007500(847)31644.3805()0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhy:RD110_14845(830)31644.0804(539)0-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)31145.3803()0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pput:L483_11550(821)31945.5800(45)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jaz:YQ44_08770(835)32146.1799(501)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbd:Tbd_2247(846)31645.9799(622)2-> K01971  ligD DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)31942.3798(557)2-> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mtim:DIR46_02775(852)31445.2795(509)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asw:CVS48_18805(867)31645.3794(481)0-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)30944.3794(689)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> adt:APT56_19400(885)31845.0793(438)0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsc:RCFBP_20893(870)32243.8793()15-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:blr8031(316)31545.1792(194)8--    DNA ligase
> boh:AKI39_06670(873)31543.8790()0-> K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_22120(898)31144.7790(8)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppb:PPUBIRD1_2515(834)32044.1790(587)1-- K01971  ligD ligD; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppu:PP_3260(833)32043.8789(588)1-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)32243.8789(681)5-> K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> masy:DPH57_08685(885)31343.8787(509)0-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)31645.9787(439)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abas:ACPOL_1798(925)32143.0785(430)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bgm:CAL15_11970(838)32144.9785(68)0-> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmon:X969_12915(830)31942.6785(584)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmot:X970_12560(830)31942.6785(584)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppg:PputGB1_2635(833)31943.6785(571)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppj:RK21_01966(830)31942.6785(573)3-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_00676(320)30643.8784
0-> K01971  ligD ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_4010(325)30545.6783(17)22-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> masz:C9I28_12940(880)31842.8783(495)0-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ote:Oter_4309(603)32845.1783(410)5<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...