GFIT result for T03230

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

amq:AMETH_0282
(237 a.a.)
 
--
 
    lig; DNA ligase, ATP-dependent
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> ngv:CDO52_22145(317)23267.21029(756)0--    ATP-dependent DNA ligase
> amyc:CU254_25885(314)22665.51020(688)0--    ATP-dependent DNA ligase
> pmad:BAY61_01235(306)22864.9999(544)0--    ATP-dependent DNA ligase
> amd:AMED_5204(314)22665.5997(676)6<-    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)22665.5997(676)6<-    lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)22665.5997(676)6<-    ATP-dependent DNA ligase
> amz:B737_5142(314)22665.5997(676)6<-    lig; ATP-dependent DNA ligase
> sen:SACE_5682(333)22761.2970(680)7--    DNA ligase, ATP-dependent
> spun:BFF78_39610(336)22758.1860(502)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12770(335)22755.9859
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_5554(334)22755.5822(526)5-- K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmal:CKJ54_13680(332)22654.9816(440)0--    ATP-dependent DNA ligase
> svl:Strvi_5345(337)22753.3811(480)8--    DNA polymerase LigD, ligase domain protein
> myo:OEM_29110(332)22654.9798(435)3--    DNA polymerase LigD ligase subunit
> sct:SCAT_5457(313)23853.4797(517)3<-    ligD; DNA polymerase LigD, ligase domain
> scy:SCATT_54560(327)23853.4797(517)4<-    DNA polymerase LigD ligase subunit
> mie:LG41_14150(332)22654.9793(430)4--    ATP-dependent DNA ligase
> mir:OCQ_30550(332)22654.9793(430)3--    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)22654.9793(430)3--    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)22654.9793(430)3--    DNA polymerase LigD ligase subunit
> mia:OCU_29800(332)22654.4788(425)3--    DNA polymerase LigD ligase subunit
> mchi:AN480_15575(332)22654.4787(424)0--    ATP-dependent DNA ligase
> mav:MAV_3148(332)22654.0786(431)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(332)22654.0786(430)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)22654.0786(430)2--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)22654.0786(430)3--    ATP-dependent DNA ligase
> mao:MAP4_2518(332)22653.1777(418)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)22653.1777(418)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)22653.1777(418)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)22653.1777(418)0--    hypothetical protein
> blin:BLSMQ_1369(316)23152.8776(444)0--    ATP-dependent DNA ligase
> grs:C7S20_03830(333)22746.7770(400)0--    ATP-dependent DNA ligase
> bbt:BBta_7782(351)23250.9758(434)3--    putative ATP-dependent DNA ligase
> hbe:BEI_0347(334)22950.2739
0-- K01971  ligD ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2126(334)22848.7739(584)1--    putative ATP-dependent DNA ligase
> rci:RCIX1968(353)22748.9719(539)3--    predicted ATP-dependent DNA ligase
> lok:Loa_02405(334)22846.5702(224)1--    DNA polymerase LigD, ligase domain protein
> acp:A2cp1_0836(683)23746.4666(331)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0832(684)23746.4663(319)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)23744.7627(296)105-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)23145.5616(395)1<- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)23145.5616(395)0<- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)23143.7612
0<- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)23046.5596(298)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_5987(879)23143.3581(62)15-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0832(656)22544.9577(32)16-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sva:SVA_1768(815)23345.1573(309)0<- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)23240.5560(304)2<- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_09606(855)22243.2557(123)9<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)24442.2552(299)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_166(342)22837.3549(315)0--    ATP-dependent DNA ligase
> jaz:YQ44_08770(835)23442.7548(312)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)23339.5541(214)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jsv:CNX70_19225(829)23340.8541(316)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpi:Rpic_0501(863)23441.9540()2<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfu:CFU_1974(830)23040.9539()1<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_c27850(865)22940.6538(85)7<- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)23244.4538(256)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)23141.1533()0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> para:BTO02_12435(966)24239.3531(300)0<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> moc:BB934_31325(225)22743.2530(32)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aza:AZKH_2968(851)23240.9529()0<- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smd:Smed_2631(865)22939.3529(146)5-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_01460(663)22943.2528(98)0-- K01971  ligD ykoU_2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)23441.5528()5<- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> splk:AV944_04690(816)23239.7525(319)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)23042.2524(332)1<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_00676(320)23139.4523()0<- K01971  ligD ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rmn:TK49_07020(873)23541.3523(299)1<- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aoa:dqs_1891(881)23442.3522(251)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)23142.4522(211)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)22938.9522(106)3<- K01971  ligD putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> melm:C7H73_09480(840)23342.1521(304)0<- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)23839.9519(347)7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsa:AciPR4_1657(957)22738.3519(301)12<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bph:Bphy_4772(651)22941.5518(11)6-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpf:Rpic12D_0488(867)23440.6517()0<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sus:Acid_3033(643)22842.1517(76)5-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azo:azo1741(881)23441.9516(245)7<- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgd:CR3_4453(984)23239.7516(288)23-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)22937.6515(108)9-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4Chr2868(865)22937.6515(93)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)22937.6515(108)9-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_15190(865)22937.6515(114)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_02600(865)22937.6515(124)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)22937.6515(119)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)22937.6515(122)7-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_chr2907(865)22937.6515(101)14-- K01971  ligD probabable ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arr:ARUE_c02810(852)23844.1514(181)7<- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pspw:BJG93_05705(942)23539.1512(10)0<- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ele:Elen_1951(822)23039.1511()0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mtim:DIR46_02775(852)23242.2511(242)0--    ligD; DNA ligase D
> esj:SJ05684_c27600(864)22938.0510(83)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> simp:C6571_07475(862)23241.4510(347)0<- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aau:AAur_0283(851)23943.9509(166)6<- K01971  ligD ATP-dependent DNA ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> kphy:AOZ06_15230(477)23340.3509(204)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> actn:L083_1682(393)21944.3508(115)18-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buz:AYM40_37600(634)23039.1508(24)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> arn:CGK93_01640(852)23843.3507(143)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)23339.1507()1<- K01971  ligD unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...