GFIT result for T05278

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

amyc:CU254_25885
(314 a.a.)
 
--
 
    ATP-dependent DNA ligase
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> amd:AMED_5204(314)31385.01860(1264)6<-    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)31385.01860(1264)6<-    lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)31385.01860(1264)6<-    ATP-dependent DNA ligase
> amz:B737_5142(314)31385.01860(1264)6<-    lig; ATP-dependent DNA ligase
> ngv:CDO52_22145(317)31667.11472(1160)0<>    ATP-dependent DNA ligase
> pmad:BAY61_01235(306)30564.91363(689)0<>    ATP-dependent DNA ligase
> sen:SACE_5682(333)31063.21354(865)7--    DNA ligase, ATP-dependent
> tee:Tel_12770(335)31557.81278
0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bsau:DWV08_07400(334)31458.61276
0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mchi:AN480_15575(332)31060.61276(673)0<-    ATP-dependent DNA ligase
> mia:OCU_29800(332)31060.31272(669)3<-    DNA polymerase LigD ligase subunit
> myo:OEM_29110(332)31060.31272(669)3<-    DNA polymerase LigD ligase subunit
> mir:OCQ_30550(332)31060.01262(659)3<-    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)31060.01262(659)3<-    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)31060.01262(659)3<-    DNA polymerase LigD ligase subunit
> mmal:CKJ54_13680(332)31059.71259(657)0<-    ATP-dependent DNA ligase
> spun:BFF78_39610(336)30561.61248(794)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_5554(334)30659.81225(869)5-> K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mav:MAV_3148(332)31058.11223(635)3--    ligD; DNA polymerase LigD, ligase domain
> mao:MAP4_2518(332)31057.71221(633)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)31057.71221(633)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)31057.71221(633)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)31057.71221(633)0--    hypothetical protein
> svl:Strvi_5345(337)31057.41214(752)8--    DNA polymerase LigD, ligase domain protein
> sct:SCAT_5457(313)31157.21192(815)3--    ligD; DNA polymerase LigD, ligase domain
> scy:SCATT_54560(327)31157.21192(815)4--    DNA polymerase LigD ligase subunit
> saln:SALB1_1757(336)30954.41177(923)0<> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7782(351)31054.81170(576)3<-    putative ATP-dependent DNA ligase
> grs:C7S20_03830(333)31150.51144(565)0<>    ATP-dependent DNA ligase
> mpd:MCP_2126(334)31552.71137(885)1<>    putative ATP-dependent DNA ligase
> rci:RCIX1968(353)31253.81119(837)3<-    predicted ATP-dependent DNA ligase
> blin:BLSMQ_1369(316)30954.01096(516)0<-    ATP-dependent DNA ligase
> hbe:BEI_0347(334)31453.21064
0<> K01971  ligD ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_0282(237)22665.51020(295)5--    lig; DNA ligase, ATP-dependent
> lok:Loa_02405(334)30650.01018(293)1<>    DNA polymerase LigD, ligase domain protein
> dpb:BABL1_gene_166(342)31543.8928(626)0<>    ATP-dependent DNA ligase
> ade:Adeh_0784(658)31746.4878(457)105-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0832(684)31746.4876(456)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)31745.7863(447)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)32647.2863(551)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)31943.9861(635)1-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)31943.9861(635)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_09606(855)31746.7853(284)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)32246.0845(482)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)31844.7844(572)7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)31742.0841
0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bot:CIT37_12965(315)31445.2830(241)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_01115(881)31043.9822(92)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_01460(663)30945.0820(35)0-- K01971  ligD ykoU_2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0832(656)31745.1819(51)16-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bjp:RN69_20745(315)31743.8817(22)7-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bju:BJ6T_42720(315)31743.8817(22)9--    hypothetical protein
> daf:Desaf_0308(931)32042.8813
3-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sva:SVA_1768(815)31543.8810(505)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpi:Rpic_0501(863)32444.4803
2-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bja:blr8031(316)31344.7802(205)8--    DNA ligase
> scl:sce3523(762)31545.4802(464)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)31544.1801(459)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rmn:TK49_07020(873)32143.3799(580)1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brc:BCCGELA001_08150(315)31444.3794(208)0--    DNA ligase
> cfu:CFU_1974(830)31343.1793(616)1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> melm:C7H73_09480(840)31844.3792(521)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpf:Rpic12D_0488(867)32243.5792
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brad:BF49_3871(315)31443.3790(200)0--    ATPdependent DNA ligase EC 6511
> fki:FK004_15155(846)31043.9789(539)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)32043.1789
5-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pol:Bpro_3003(882)31843.1788
2-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)31941.4787(570)2-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhy:RD110_14845(830)31742.3787(537)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)31842.8786(371)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samy:DB32_004561(334)30944.0784(391)6-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)31344.1782
0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)30842.9782
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsc:RCFBP_20893(870)32143.6781
15-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbd:Tbd_2247(846)31843.7781(596)2-- K01971  ligD DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)31641.8779
0-- K01971  ligD putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jsv:CNX70_19225(829)31942.6778(530)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nlc:EBAPG3_007500(847)31843.1778
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ote:Oter_4309(603)32844.2778(402)5<- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asw:CVS48_18805(867)31743.5772(482)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pos:DT070_17835(874)31342.5771(501)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)31342.2770(531)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpt:Bpet3441(822)31941.7768
1-- K01971  ligD unnamed protein product; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgd:CR3_4453(984)31442.4768(515)23-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> jaz:YQ44_08770(835)32043.4767(494)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pls:VT03_22120(898)31342.5765(14)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rta:Rta_07780(819)31542.2765(384)29-- K01971  ligD ATP-dependent DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abas:ACPOL_1798(925)31541.6763(392)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_4951(349)32042.5761(13)15-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> reu:Reut_B5079(901)31242.9761(195)3-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpy:BA022_07305(837)31741.3758(486)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppb:PPUBIRD1_2515(834)31742.0757(541)1-- K01971  ligD ligD; LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> achb:DVB37_13475(873)31642.7756(443)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mtim:DIR46_02775(852)31142.8755(478)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vaa:AX767_14310(838)31941.7755(502)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ajs:Ajs_2523(837)31741.3754(478)10-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vap:Vapar_1660(847)31942.0754(470)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bph:Bphy_0981(954)32141.1753(100)8-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> moc:BB934_30980(820)31842.1753(44)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppi:YSA_10746(833)31741.6753(467)2-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...