GFIT result for
amyc
|
GFIT result for
amyc
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| amyc:CU254_25885 (314 a.a.) |
-- |
K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > aprt:MUY14_11550(314) | 313 | 85.0 | 1861 | 6 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > amd:AMED_5204(314) | 313 | 85.0 | 1860 | 6 | <- | lig; ATP-dependent DNA ligase | |||
| > amm:AMES_5142(314) | 313 | 85.0 | 1860 | 6 | <- | lig; ATP-dependent DNA ligase | |||
| > amn:RAM_26510(314) | 313 | 85.0 | 1860 | 6 | <- | ATP-dependent DNA ligase | |||
| > amz:B737_5142(314) | 313 | 85.0 | 1860 | 6 | <- | lig; ATP-dependent DNA ligase | |||
| > aacd:LWP59_01145(314) | 311 | 67.8 | 1478 | 5 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > ngv:CDO52_22145(317) | 316 | 67.1 | 1472 | 3 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sacg:FDZ84_03685(331) | 310 | 63.2 | 1377 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > athm:L1857_03860(313) | 312 | 63.1 | 1372 | 7 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > pmad:BAY61_01235(306) | 305 | 64.9 | 1363 | 6 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sen:SACE_5682(333) | 310 | 63.2 | 1354 | 7 | -- | DNA ligase, ATP-dependent | |||
| > sace:GIY23_15300(305) | 302 | 63.6 | 1349 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msto:MSTO_10710(332) | 312 | 62.2 | 1330 | 4 | <- | K01971 | ligD | lig_1; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > atl:Athai_16490(331) | 311 | 61.4 | 1324 | 8 | -- | K01971 | ligD | lig_1; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > abry:NYE86_21330(335) | 312 | 61.5 | 1305 | 6 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > amyy:YIM_01445(608) | 311 | 62.1 | 1298 | 11 | -- | K01971 | ligD | ykoU1; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mnv:MNVI_39020(334) | 310 | 61.9 | 1292 | 3 | <- | K01971 | ligD | lig_2; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmam:K3U93_11230(332) | 310 | 60.0 | 1288 | 3 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > stub:MMF93_30010(343) | 308 | 61.4 | 1287 | 5 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > mxe:MYXE_27180(329) | 310 | 61.0 | 1283 | 5 | <> | K01971 | ligD | lig_1; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tee:Tel_12770(335) | 315 | 57.8 | 1278 | 0 | <> | ATP-dependent DNA ligase | |||
| > mhek:JMUB5695_02674(329) | 310 | 61.0 | 1277 | 4 | <> | lig_1; ATP-dependent DNA ligase | |||
| > bsau:DWV08_07400(334) | 314 | 58.6 | 1276 | 1 | <> | ATP-dependent DNA ligase | |||
| > mchi:AN480_15575(332) | 310 | 60.6 | 1276 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sdw:K7C20_36450(340) | 306 | 61.8 | 1276 | 5 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > ksl:OG809_23010(?) | 314 | 58.9 | 1272 | 0 | -- | - | |||
| > mia:OCU_29800(332) | 310 | 60.3 | 1272 | 3 | <- | DNA polymerase LigD ligase subunit | |||
| > myo:OEM_29110(332) | 310 | 60.3 | 1272 | 3 | <- | DNA polymerase LigD ligase subunit | |||
| > mbrd:MBRA_29630(330) | 310 | 60.0 | 1270 | 5 | -- | lig_1; ATP-dependent DNA ligase | |||
| > sbat:G4Z16_28965(338) | 307 | 59.6 | 1270 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sjn:RI060_41275(?) | 309 | 61.5 | 1269 | 0 | -- | - | |||
| > mir:OCQ_30550(332) | 310 | 60.0 | 1262 | 3 | <- | DNA polymerase LigD ligase subunit | |||
| > mit:OCO_29890(332) | 310 | 60.0 | 1262 | 3 | <- | DNA polymerase LigD ligase subunit | |||
| > mmm:W7S_14830(332) | 310 | 60.0 | 1262 | 3 | <- | DNA polymerase LigD ligase subunit | |||
| > scoe:CP976_40630(343) | 309 | 60.8 | 1260 | 10 | -> | ATP-dependent DNA ligase | |||
| > mmal:CKJ54_13680(332) | 310 | 59.7 | 1259 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mseo:MSEO_11130(330) | 312 | 58.3 | 1254 | 3 | <- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > strz:OYE22_33050(?) | 316 | 60.4 | 1249 | 0 | -- | - | |||
| > sinn:ABB07_35350(?) | 314 | 60.5 | 1248 | 0 | -- | - | |||
| > spun:BFF78_39610(336) | 305 | 61.6 | 1248 | 6 | -> | ATP-dependent DNA ligase | |||
| > saiu:J4H86_14520(308) | 304 | 60.2 | 1246 | 1 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > sby:H7H31_33075(338) | 316 | 60.4 | 1245 | 5 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msim:MSIM_00620(336) | 314 | 58.9 | 1240 | 3 | <> | lig_1; ATP-dependent DNA ligase | |||
| > mshg:MSG_02295(332) | 310 | 58.4 | 1235 | 3 | <> | lig; ATP-dependent DNA ligase | |||
| > bala:DSM104299_03478(331) | 315 | 59.0 | 1233 | 0 | -- | ligD_3; Multifunctional non-homologous end joining protein LigD | |||
| > shau:K9S39_02115(?) | 305 | 60.0 | 1232 | 0 | -- | - | |||
| > sals:SLNWT_5554(334) | 306 | 59.8 | 1225 | 5 | -> | DNA polymerase LigD, ligase domain-containing protein | |||
| > sgob:test1122_24620(334) | 314 | 58.6 | 1224 | 2 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > mav:MAV_3148(332) | 310 | 58.1 | 1223 | 3 | -- | ligD; DNA polymerase LigD, ligase domain | |||
| > mao:MAP4_2518(332) | 310 | 57.7 | 1221 | 3 | -- | ATP-dependent DNA ligase | |||
| > mavi:RC58_12520(332) | 310 | 57.7 | 1221 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mavu:RE97_12540(332) | 310 | 57.7 | 1221 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mpa:MAP_1329c(354) | 310 | 57.7 | 1221 | 3 | -- | hypothetical protein | |||
| > svl:Strvi_5345(337) | 310 | 57.4 | 1214 | 8 | -- | DNA polymerase LigD, ligase domain protein | |||
| > bsol:FSW04_10385(301) | 306 | 60.8 | 1206 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmeh:M5I08_09800(332) | 310 | 58.4 | 1203 | 3 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > msak:MSAS_04130(332) | 310 | 57.1 | 1202 | 4 | <- | lig_1; ATP-dependent DNA ligase | |||
| > sbae:DSM104329_01691(333) | 303 | 59.7 | 1199 | 3 | -- | ligD_1; Multifunctional non-homologous end joining protein LigD | |||
| > sct:SCAT_5457(313) | 311 | 57.2 | 1192 | 3 | -- | ligD; DNA polymerase LigD, ligase domain | |||
| > scy:SCATT_54560(327) | 311 | 57.2 | 1192 | 4 | -- | DNA polymerase LigD ligase subunit | |||
| > ima:PO878_05750(318) | 315 | 56.2 | 1189 | 4 | <> | ligD; non-homologous end-joining DNA ligase | |||
| > saln:SALB1_1757(336) | 309 | 54.4 | 1177 | 2 | <> | ATP-dependent DNA ligase clustered with Ku protein, LigD | |||
| > fpf:DCC35_18755(327) | 311 | 52.1 | 1173 | 1 | <> | ATP-dependent DNA ligase | |||
| > slf:JEQ17_45165(336) | 306 | 56.5 | 1173 | 4 | -- | ligD; non-homologous end-joining DNA ligase | |||
| > sgm:GCM10017557_77030(335) | 306 | 58.2 | 1171 | 4 | -- | K01971 | ligD | lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bbt:BBta_7782(351) | 310 | 54.8 | 1170 | 3 | <- | putative ATP-dependent DNA ligase | |||
| > sgd:ELQ87_38365(346) | 312 | 56.4 | 1152 | 6 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nano:G5V58_14200(337) | 306 | 55.6 | 1146 | 3 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpah:QA639_13385(?) | 303 | 56.4 | 1144 | 0 | -- | - | |||
| > grs:C7S20_03830(333) | 311 | 50.5 | 1144 | 2 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mpd:MCP_2126(334) | 315 | 52.7 | 1137 | 1 | <> | putative ATP-dependent DNA ligase | |||
| > dms:E8L03_18425(320) | 315 | 54.6 | 1127 | 0 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rci:RCIX1968(353) | 312 | 53.8 | 1119 | 3 | <- | predicted ATP-dependent DNA ligase | |||
| > aev:EI546_00620(333) | 311 | 51.1 | 1118 | 3 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > baut:QA635_08135(305) | 303 | 55.8 | 1116 | 0 | -> | ligD; non-homologous end-joining DNA ligase | |||
| > blin:BLSMQ_1369(316) | 309 | 54.0 | 1096 | 1 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > muz:H4N58_18715(329) | 320 | 52.8 | 1090 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acty:OG774_29530(?) | 313 | 55.3 | 1086 | 0 | -- | - | |||
| > lib:E4T55_01175(308) | 303 | 52.1 | 1071 | 1 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hbe:BEI_0347(334) | 314 | 53.2 | 1064 | 3 | <> | ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD | |||
| > spad:DVK44_30175(317) | 313 | 54.0 | 1063 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amq:AMETH_0282(237) | 226 | 65.5 | 1020 | 5 | -- | lig; DNA ligase, ATP-dependent | |||
| > atq:GH723_15410(318) | 313 | 51.1 | 1018 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lok:Loa_02405(334) | 306 | 50.0 | 1018 | 1 | <> | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nbt:KLP28_11350(324) | 329 | 51.1 | 964 | 0 | <- | ligD; non-homologous end-joining DNA ligase | |||
| > hmi:soil367_13920(328) | 316 | 45.9 | 947 | 2 | <- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > dpb:BABL1_gene_166(342) | 315 | 43.8 | 928 | 1 | <> | ATP-dependent DNA ligase | |||
| > iam:HC251_02520(317) | 315 | 49.2 | 905 | 4 | -- | ATP-dependent DNA ligase | |||
| > nti:DNFV4_03251(?) | 320 | 47.5 | 885 | 0 | -- | - | |||
| > ade:Adeh_0784(658) | 317 | 46.4 | 878 | 109 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hhf:E2K99_11915(857) | 319 | 42.9 | 878 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ank:AnaeK_0832(684) | 317 | 46.4 | 876 | 136 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acp:A2cp1_0836(683) | 317 | 45.7 | 863 | 136 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nja:NSJP_1173(864) | 326 | 47.2 | 863 | 3 | -- | K01971 | ligD | ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hse:Hsero_2271(856) | 319 | 43.9 | 861 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hsz:ACP92_11350(856) | 319 | 43.9 | 861 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > llu:AKJ09_09606(855) | 317 | 46.7 | 853 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nmv:NITMOv2_2657(895) | 322 | 46.0 | 845 | 3 | -- | K01971 | ligD | ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccro:CMC5_051300(404) | 318 | 44.7 | 844 | 7 | -- | K01971 | ligD | ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hrb:Hrubri_2562(861) | 317 | 42.0 | 841 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |