GFIT result for
cse
|
GFIT result for
cse
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| cse:Cseg_3113 (883 a.a.) |
-- |
K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > cauf:CSW63_08995(868) | 882 | 77.4 | 4697 | 3 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cfh:C1707_22550(880) | 889 | 66.3 | 3918 | 10 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cak:Caul_1769(918) | 923 | 63.4 | 3826 | 4 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > brq:CIT40_25705(894) | 898 | 62.8 | 3731 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpe:RPE_3724(907) | 909 | 61.8 | 3723 | 4 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpc:RPC_3685(920) | 906 | 62.7 | 3722 | 7 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmea:KTC28_19430(885) | 896 | 61.3 | 3717 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bcan:BcanWSM471_29895(891) | 896 | 62.2 | 3713 | 12 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsym:CIT39_24695(893) | 901 | 62.0 | 3701 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bot:CIT37_20760(895) | 900 | 61.6 | 3696 | 6 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > poq:KZX46_03665(885) | 896 | 61.2 | 3696 | 7 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bja:bll6773(892) | 900 | 61.4 | 3695 | 11 | -- | K01971 | ligD | bll6773; ORF_ID:bll6773; probable DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > brad:BF49_4877(903) | 896 | 61.9 | 3695 | 19 | -- | K01971 | ligD | ATPdependent DNA ligase EC 6511 clustered with Ku protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bic:LMTR13_06580(890) | 895 | 61.0 | 3693 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpa:TX73_018915(?) | 918 | 62.0 | 3687 | 0 | -- | - | |||
| > rpx:Rpdx1_1701(914) | 918 | 62.0 | 3687 | 14 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agt:EYD00_25715(883) | 892 | 60.5 | 3680 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > avi:Avi_8017(893) | 893 | 61.1 | 3673 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > avv:RvVAT039_pl09270(901) | 893 | 61.1 | 3673 | 6 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ecaa:J3R84_30055(?) | 891 | 60.2 | 3671 | 0 | -- | - | |||
| > rpus:CFBP5875_23865(883) | 892 | 60.7 | 3670 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhid:FFM81_029625(882) | 894 | 60.9 | 3669 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlu:RLEG12_02295(882) | 894 | 60.9 | 3669 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > asal:CFBP5507_25805(884) | 892 | 60.2 | 3665 | 6 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rir:BN877_p0677(883) | 892 | 60.4 | 3665 | 6 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlg:Rleg_5638(882) | 887 | 61.3 | 3662 | 6 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > trb:HB776_01430(907) | 914 | 60.9 | 3661 | 7 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bvv:BHK69_13460(879) | 887 | 60.4 | 3659 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ata:AWN88_04490(883) | 892 | 60.4 | 3657 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > brs:S23_15390(889) | 897 | 61.5 | 3657 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bves:QO058_14610(?) | 886 | 59.4 | 3655 | 0 | -- | - | |||
| > rlb:RLEG3_09760(881) | 892 | 60.2 | 3654 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpd:RPD_3490(930) | 928 | 60.2 | 3653 | 12 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhv:BA939_19590(883) | 892 | 60.3 | 3652 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpt:Rpal_4171(914) | 919 | 61.8 | 3652 | 14 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rbq:J2J99_29365(887) | 892 | 60.7 | 3650 | 9 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bgq:X265_09370(890) | 901 | 61.3 | 3648 | 12 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > atu:Atu5055(884) | 892 | 60.0 | 3647 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bjp:RN69_12895(888) | 895 | 61.5 | 3645 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bju:BJ6T_26450(888) | 895 | 61.5 | 3645 | 10 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bop:AXW83_24315(891) | 889 | 60.4 | 3645 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bro:BRAD285_1482(907) | 907 | 60.5 | 3645 | 4 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bbet:F8237_22875(888) | 893 | 61.4 | 3643 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bxn:I3J27_29410(?) | 895 | 61.1 | 3642 | 0 | -- | - | |||
| > rlt:Rleg2_5705(883) | 894 | 60.4 | 3642 | 7 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > arui:G6M88_24445(890) | 890 | 59.9 | 3640 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pcax:AFIC_002308(885) | 900 | 60.8 | 3640 | 0 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > caul:KCG34_05145(869) | 882 | 62.0 | 3639 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rbw:RLCC275e_24395(?) | 892 | 59.8 | 3639 | 0 | -- | - | |||
| > rpb:RPB_1876(914) | 917 | 61.3 | 3638 | 12 | -- | K01971 | ligD | ATP dependent DNA ligase, central; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > brc:BCCGELA001_09220(895) | 902 | 61.6 | 3637 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bban:J4G43_041680(888) | 894 | 60.9 | 3636 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > apol:K9D25_24730(880) | 891 | 59.9 | 3634 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bra:BRADO5823(904) | 904 | 60.5 | 3634 | 3 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rrho:PR018_27975(889) | 886 | 60.4 | 3634 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rls:HB780_00180(882) | 891 | 60.4 | 3633 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlw:RlegWSM1455_24665(881) | 892 | 59.9 | 3633 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rad:CO657_29205(881) | 892 | 60.2 | 3632 | 9 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > talz:RPMA_08485(?) | 900 | 60.3 | 3632 | 0 | -- | - | |||
| > rrg:J3P73_26340(881) | 892 | 59.5 | 3627 | 7 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rii:FFM53_025585(881) | 892 | 59.8 | 3626 | 7 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > barh:WN72_38750(889) | 896 | 61.2 | 3623 | 14 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aol:S58_17960(909) | 909 | 59.7 | 3622 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > boi:BLM15_30030(874) | 887 | 59.9 | 3622 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mlo:mll9625(883) | 892 | 60.5 | 3619 | 13 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rtu:PR017_26710(889) | 885 | 60.0 | 3619 | 7 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agr:AGROH133_14508(887) | 888 | 60.8 | 3616 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > npm:QEO92_31870(883) | 894 | 59.6 | 3616 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > raw:NE851_02430(881) | 892 | 59.9 | 3616 | 6 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bdg:LPJ38_13595(895) | 902 | 61.2 | 3614 | 7 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > avq:HRR99_18745(893) | 890 | 60.2 | 3613 | 3 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ret:RHE_PE00252(882) | 892 | 60.0 | 3610 | 6 | -- | K01971 | ligD | putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rei:IE4771_PD00652(878) | 891 | 60.4 | 3609 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rel:REMIM1_PD00265(882) | 892 | 60.0 | 3609 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bbt:BBta_6329(895) | 902 | 60.5 | 3607 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhk:Kim5_PC00578(878) | 891 | 60.4 | 3607 | 9 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rez:AMJ99_PC00263(882) | 892 | 59.9 | 3604 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhn:AMJ98_PD00262(882) | 892 | 59.9 | 3604 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhx:AMK02_PE00262(882) | 892 | 59.9 | 3604 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bvz:BRAD3257_2481(901) | 896 | 61.0 | 3603 | 10 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rle:pRL120229(881) | 892 | 59.5 | 3603 | 5 | -- | K01971 | ligD | putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rep:IE4803_PC00640(878) | 890 | 60.3 | 3602 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > alf:CFBP5473_22245(913) | 888 | 60.6 | 3601 | 6 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > neo:CYG48_19460(878) | 885 | 59.5 | 3600 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rln:J0663_27740(882) | 892 | 60.5 | 3598 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bgz:XH91_08250(883) | 891 | 60.9 | 3596 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > shz:shn_31130(878) | 892 | 59.6 | 3593 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pzu:PHZ_c3259(887) | 906 | 60.4 | 3592 | 18 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ead:OV14_b0410(884) | 892 | 59.5 | 3591 | 10 | -- | K01971 | ligD | putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhr:CKA34_01630(877) | 891 | 59.9 | 3591 | 4 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsul:N2599_23605(880) | 893 | 59.1 | 3589 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > eah:FA04_28305(880) | 891 | 59.3 | 3588 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rec:RHECIAT_PA0000197(882) | 892 | 59.9 | 3587 | 6 | -- | K01971 | ligD | putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpah:QA639_32160(?) | 891 | 59.7 | 3583 | 0 | -- | - | |||
| > liz:LGH83_01330(913) | 915 | 58.0 | 3583 | 7 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msl:Msil_1736(888) | 900 | 59.6 | 3580 | 4 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > xau:Xaut_4365(886) | 897 | 59.0 | 3580 | 5 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > oca:OCAR_6912(889) | 904 | 59.8 | 3579 | 1 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ocg:OCA5_c11710(889) | 904 | 59.8 | 3579 | 1 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > oco:OCA4_c11710(889) | 904 | 59.8 | 3579 | 1 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |