GFIT result for T05125

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

hbe:BEI_0347
(334 a.a.)
 
--
 
K01971  ligD  ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> svl:Strvi_5345(337)33854.41165(832)8--    DNA polymerase LigD, ligase domain protein
> sen:SACE_5682(333)33352.31096(625)7--    DNA ligase, ATP-dependent
> tee:Tel_12770(335)33550.41088
0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mchi:AN480_15575(332)33351.41084(503)0<-    ATP-dependent DNA ligase
> mmal:CKJ54_13680(332)33350.21080(496)0<-    ATP-dependent DNA ligase
> myo:OEM_29110(332)33351.41080(499)3<-    DNA polymerase LigD ligase subunit
> mie:LG41_14150(332)33351.11078(497)4<-    ATP-dependent DNA ligase
> mir:OCQ_30550(332)33351.11078(497)3<-    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)33351.11078(497)3<-    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)33351.11078(497)3<-    DNA polymerase LigD ligase subunit
> mia:OCU_29800(332)33351.11076(495)3<-    DNA polymerase LigD ligase subunit
> amyc:CU254_25885(314)31453.21064(542)0<>    ATP-dependent DNA ligase
> mav:MAV_3148(332)33350.81064(452)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(332)33350.81064(450)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)33350.81064(450)2--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)33350.81064(450)3--    ATP-dependent DNA ligase
> mao:MAP4_2518(332)33350.51060(448)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)33350.51060(448)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)33350.51060(448)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)33350.21054(442)0--    hypothetical protein
> amd:AMED_5204(314)31352.71047(511)6<-    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)31352.71047(511)6<-    lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)31352.71047(511)6<-    ATP-dependent DNA ligase
> amz:B737_5142(314)31352.71047(511)6<-    lig; ATP-dependent DNA ligase
> ngv:CDO52_22145(317)31949.81028(762)0<>    ATP-dependent DNA ligase
> bbt:BBta_7782(351)32149.51026(493)3<-    putative ATP-dependent DNA ligase
> mpd:MCP_2126(334)33247.91026(766)1<>    putative ATP-dependent DNA ligase
> spun:BFF78_39610(336)33653.61025(527)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmad:BAY61_01235(306)30752.41015(417)0<>    ATP-dependent DNA ligase
> rci:RCIX1968(353)33448.81014(767)3<-    predicted ATP-dependent DNA ligase
> grs:C7S20_03830(333)33444.61006(379)0<>    ATP-dependent DNA ligase
> sals:SLNWT_5554(334)30853.2987(653)5-> K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scy:SCATT_54560(327)32750.8968(625)4--    DNA polymerase LigD ligase subunit
> sct:SCAT_5457(313)31651.9963(620)3--    ligD; DNA polymerase LigD, ligase domain
> blin:BLSMQ_1369(316)31749.8956(400)0<-    ATP-dependent DNA ligase
> lok:Loa_02405(334)33543.0898(209)1<>    DNA polymerase LigD, ligase domain protein
> scl:sce3523(762)32446.0878(606)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)35145.6855(561)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gbm:Gbem_0128(871)33345.9842
2-- K01971  ligD ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)33445.8834(526)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)32443.8834(543)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cfu:CFU_1974(830)34243.3830(646)1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)33243.4811(710)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_166(342)33238.6801(550)0<>    ATP-dependent DNA ligase
> abac:LuPra_01460(663)31946.1800(87)0-- K01971  ligD ykoU_2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ruf:TH63_03090(857)33342.6799
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llu:AKJ09_09606(855)33543.6798(241)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gem:GM21_0109(872)33344.4793
1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> puv:PUV_10690(794)32841.5791
0-- K01971  ligD putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)33244.0787(422)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0832(684)33244.0787(413)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)33942.5787(560)1-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)33942.5787(560)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)31644.9783(608)7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_0832(656)32142.7778(44)16-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geo:Geob_0336(829)32044.1778
1-- K01971  ligD ligD; DNA ligase D, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pcq:PcP3B5_27230(850)33343.8774
0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geb:GM18_0111(892)34242.7772
2-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tmc:LMI_2571(822)30840.3770
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vaa:AX767_14310(838)32742.5770(547)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gur:Gura_3452(534)32641.7769(669)0<- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paem:U769_14610(840)33243.1765(662)5-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psg:G655_14430(840)33243.1765(662)3-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rta:Rta_07780(819)33941.9765(376)29-- K01971  ligD ATP-dependent DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeg:AI22_18760(840)33243.1764(662)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daf:Desaf_0308(931)34240.6763(662)3-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paf:PAM18_2902(840)33243.1763(661)3-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pae:PA2138(840)33243.1762(660)4-- K01971  ligD  [sp:LIGD_PSEAE] multifunctional non-homologous end joining protein LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paec:M802_2202(840)33243.1762
2-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paei:N296_2205(840)33243.1762(660)4-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pael:T223_16290(840)33243.1762(661)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeo:M801_2204(840)33243.1762(660)4-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paep:PA1S_15010(840)33243.1762
0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paer:PA1R_gp5617(840)33243.1762
2-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paes:SCV20265_3244(840)33243.1762(660)4-- K01971  ligD ATP-dependent DNA ligaseclustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paev:N297_2205(840)33243.1762(660)4-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pag:PLES_31891(840)33243.1762(661)3-- K01971  ligD probable ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pau:PA14_36910(840)33243.1762
2-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pdk:PADK2_14980(840)33243.1762(660)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> prp:M062_11085(840)33243.1762(659)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paeb:NCGM1900_4345(840)33243.1761(658)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pnc:NCGM2_3118(840)33243.1761(658)2-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cgd:CR3_4453(984)32642.3757(522)23-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmu:Nmul_A1177(853)32241.0757
0-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhy:RD110_14845(830)35340.2757(525)0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vpd:VAPA_1c17500(851)32240.7756(497)4-- K01971  ligD putative DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> adt:APT56_19400(885)34043.2755(423)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsc:RCFBP_20893(870)34843.1755
15-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> psj:PSJM300_09695(840)32442.6754
1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)32143.6753(400)105-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vap:Vapar_1660(847)32241.0752(497)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbd:Tbd_2247(846)33043.6751(582)2-- K01971  ligD DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)32741.0750(486)1-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pbm:CL52_09565(845)32642.0746(561)4-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pmy:Pmen_3217(837)33244.3746(516)4-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bch:Bcen2424_6483(936)34641.9744(73)6-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcn:Bcen_1346(936)34641.9744
4-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fla:SY85_09220(907)33139.9744(485)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)33740.1744
0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)33140.5743(418)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...