GFIT result for
mia
|
GFIT result for
mia
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| mia:OCU_42820 (153 a.a.) |
-- |
RNA polymerase sigma factor, sigma-70 family protein | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > mit:OCO_43050(153) | 153 | 100.0 | 960 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mid:MIP_06466(153) | 153 | 99.3 | 956 | 2 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mir:OCQ_44170(183) | 153 | 99.3 | 954 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmm:W7S_21510(183) | 153 | 99.3 | 954 | 3 | <> | igma-70 family RNA polymerase sigma factor | |||
| > myo:OEM_43290(183) | 153 | 99.3 | 954 | 3 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mchi:AN480_22500(183) | 153 | 98.7 | 947 | 4 | <> | RNA polymerase subunit sigma | |||
| > msak:MSAS_45680(179) | 152 | 88.8 | 851 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mman:MMAN_31190(183) | 152 | 88.2 | 845 | 3 | <> | putative RNA polymerase sigma factor | |||
| > mav:MAV_4415(179) | 152 | 87.5 | 843 | 4 | <> | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mseo:MSEO_49050(182) | 152 | 86.8 | 840 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mao:MAP4_4342(179) | 152 | 86.8 | 839 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mavi:RC58_21570(179) | 152 | 86.8 | 839 | 5 | <> | RNA polymerase sigma factor | |||
| > mavu:RE97_21620(179) | 152 | 86.8 | 839 | 5 | <> | RNA polymerase sigma factor | |||
| > mpa:MAP_4217(179) | 152 | 86.8 | 839 | 5 | <> | hypothetical protein | |||
| > mshg:MSG_00969(182) | 152 | 84.9 | 820 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mlw:MJO58_05095(180) | 153 | 86.3 | 819 | 5 | <> | sigma-70 family RNA polymerase sigma factor | |||
| > msim:MSIM_15410(187) | 151 | 85.4 | 818 | 4 | <> | putative RNA polymerase sigma factor | |||
| > mfj:MFLOJ_25060(180) | 153 | 86.3 | 814 | 5 | <- | putative RNA polymerase sigma factor | |||
| > msto:MSTO_28290(183) | 153 | 86.3 | 808 | 5 | <> | putative RNA polymerase sigma factor | |||
| > mbrd:MBRA_05770(179) | 152 | 82.2 | 792 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mnv:MNVI_26030(179) | 149 | 83.9 | 790 | 3 | <- | putative RNA polymerase sigma factor | |||
| > mpag:C0J29_05965(189) | 153 | 80.4 | 790 | 4 | <- | RNA polymerase subunit sigma | |||
| > mcoo:MCOO_42530(167) | 149 | 79.9 | 761 | 2 | <- | putative RNA polymerase sigma factor | |||
| > mpaa:MKK62_19730(179) | 151 | 80.1 | 761 | 4 | <- | RNA polymerase sigma factor | |||
| > mmag:MMAD_32210(172) | 153 | 79.7 | 739 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mmuc:C1S78_017885(181) | 153 | 76.5 | 737 | 4 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > mphu:MPHO_00980(181) | 153 | 76.5 | 737 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mabb:MASS_1p0095(181) | 153 | 76.5 | 736 | 3 | <- | RNA polymerase sigma factor, sigma-70 family protein | |||
| > mmat:MMAGJ_46560(188) | 153 | 71.9 | 735 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mdx:BTO20_26575(178) | 153 | 71.9 | 707 | 6 | <- | RNA polymerase subunit sigma | |||
| > mcro:MI149_04390(179) | 150 | 72.7 | 704 | 3 | <- | RNA polymerase sigma factor | |||
| > mcb:Mycch_1362(194) | 159 | 71.7 | 698 | 2 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mhev:MHEL_14370(179) | 150 | 72.0 | 697 | 4 | <- | putative RNA polymerase sigma factor | |||
| > mabl:MMASJCM_4707(185) | 153 | 73.2 | 696 | 1 | <- | RNA polymerase sigma factor | |||
| > mmv:MYCMA_03425(185) | 153 | 73.2 | 696 | 1 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > miz:BAB75_26190(184) | 154 | 73.4 | 693 | 3 | <- | RNA polymerase subunit sigma | |||
| > mll:B1R94_04110(180) | 150 | 70.7 | 693 | 5 | <- | RNA polymerase subunit sigma | |||
| > mpae:K0O64_03790(179) | 150 | 71.3 | 692 | 3 | <- | RNA polymerase sigma factor | |||
| > maic:MAIC_48540(179) | 150 | 72.0 | 689 | 4 | <- | putative RNA polymerase sigma factor | |||
| > msal:DSM43276_04475(184) | 153 | 71.9 | 688 | 5 | <- | sigX; RNA polymerase sigma factor SigX | |||
| > maub:MAUB_11840(185) | 157 | 72.0 | 687 | 6 | <- | putative RNA polymerase sigma factor | |||
| > mye:AB431_03980(179) | 150 | 70.7 | 687 | 2 | <- | RNA polymerase sigma factor | |||
| > mste:MSTE_04816(184) | 153 | 71.2 | 684 | 4 | <- | putative RNA polymerase sigma factor | |||
| > many:MANY_47430(178) | 152 | 68.4 | 682 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mkn:MKAN_19960(157) | 121 | 87.6 | 675 | 0 | -- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > mab:MAB_4652(185) | 153 | 71.2 | 673 | 3 | <- | K03088 | rpoE | Putative RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > msao:MYCSP_21660(184) | 153 | 68.6 | 663 | 5 | <- | RNA polymerase sigma factor | |||
| > nah:F5544_08000(204) | 152 | 65.1 | 647 | 8 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > nyu:D7D52_36470(?) | 152 | 63.2 | 607 | 0 | -- | - | |||
| > mrh:MycrhN_1984(183) | 151 | 58.9 | 596 | 3 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > mrf:MJO55_27030(184) | 150 | 62.7 | 591 | 7 | <- | RNA polymerase sigma factor | |||
| > mpsc:MPSYJ_10150(168) | 153 | 60.1 | 585 | 5 | <- | putative RNA polymerase sigma factor | |||
| > mmor:MMOR_08160(165) | 147 | 59.2 | 574 | 3 | <- | putative RNA polymerase sigma factor | |||
| > amd:AMED_3760(193) | 155 | 61.9 | 571 | 21 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amm:AMES_3715(193) | 155 | 61.9 | 571 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amn:RAM_19145(193) | 155 | 61.9 | 571 | 21 | <- | ECF subfamily RNA polymerase sigma-24 factor | |||
| > amz:B737_3715(193) | 155 | 61.9 | 571 | 22 | <- | rpoE; ECF subfamily RNA polymerase sigma-24 factor | |||
| > ksl:OG809_22635(?) | 152 | 62.5 | 571 | 0 | -- | - | |||
| > nsr:NS506_06042(190) | 152 | 61.8 | 570 | 4 | <- | hypothetical protein | |||
| > agra:AGRA3207_007836(197) | 151 | 64.2 | 568 | 30 | <- | RNA polymerase sigma factor | |||
| > msa:Mycsm_06152(165) | 147 | 57.1 | 566 | 5 | <- | RNA polymerase sigma factor, sigma-70 family | |||
| > kut:JJ691_47140(187) | 153 | 58.8 | 564 | 14 | <- | rpoE_14; ECF subfamily RNA polymerase sigma-24 factor | |||
| > amyc:CU254_17200(193) | 153 | 60.8 | 552 | 14 | <- | RNA polymerase subunit sigma | |||
| > cai:Caci_2526(198) | 159 | 58.5 | 550 | 26 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > fal:FRAAL4137(171) | 155 | 60.0 | 542 | 5 | <- | putative ECF sub-family Sigma-70 factor | |||
| > pfla:Pflav_031030(196) | 152 | 58.6 | 541 | 38 | <- | rpoE_13; RNA polymerase sigma24 factor | |||
| > aprt:MUY14_29390(193) | 153 | 58.8 | 538 | 15 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > dvc:Dvina_28740(167) | 151 | 59.6 | 534 | 43 | <- | RNA polymerase sigma factor | |||
| > dmat:Dmats_24000(178) | 151 | 59.6 | 533 | 33 | <- | RNA polymerase sigma factor | |||
| > fri:FraEuI1c_2645(203) | 149 | 56.4 | 516 | 14 | <- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > abry:NYE86_06175(201) | 155 | 55.5 | 511 | 12 | -- | RNA polymerase sigma factor | |||
| > kbs:EPA93_28450(202) | 156 | 42.3 | 368 | 42 | <- | sigma-70 family RNA polymerase sigma factor | |||
| > kbb:ccbrp13_67120(?) | 153 | 33.3 | 307 | 0 | -- | - | |||
| > ami:Amir_6736(217) | 155 | 36.1 | 257 | 23 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > apre:CNX65_33200(217) | 155 | 35.5 | 255 | 26 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ssyi:EKG83_44655(214) | 154 | 34.4 | 255 | 41 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > thug:KNN16_11270(184) | 155 | 38.7 | 252 | 8 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > sesp:BN6_80910(214) | 158 | 36.1 | 248 | 32 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sgrg:L0C25_07670(?) | 157 | 33.1 | 247 | 0 | -- | - | |||
| > jlv:G3257_14580(172) | 153 | 32.7 | 245 | 18 | -- | K23514 | fecI | sigma-70 family RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > mdr:MDOR_06240(174) | 155 | 32.3 | 244 | 2 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > blr:BRLA_c011480(181) | 140 | 32.1 | 240 | 19 | -- | K03088 | rpoE | sigX_3; RNA polymerase sigma factor SigX; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mmar:MODMU_4999(210) | 158 | 35.4 | 239 | 24 | -- | K03088 | rpoE | sigX; RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kal:KALB_8357(199) | 154 | 35.1 | 236 | 28 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > acht:bsdcttw_13770(182) | 146 | 32.9 | 235 | 4 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > jaz:YQ44_13745(169) | 153 | 32.0 | 235 | 19 | -- | K23514 | fecI | RNA polymerase sigma factor; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > jah:JAB4_028780(178) | 155 | 29.7 | 233 | 14 | -- | K23514 | fecI | fecI_4; putative RNA polymerase sigma factor FecI; K23514 RNA polymerase sigma-19 factor, ECF subfamily | |
| > cth:Cthe_1809(179) | 150 | 30.7 | 232 | 4 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ctx:Clo1313_2483(179) | 150 | 30.7 | 232 | 4 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > spra:CP972_20380(276) | 153 | 37.9 | 231 | 48 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppel:H6H00_02580(171) | 156 | 37.2 | 229 | 18 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > awn:NQV15_15970(?) | 154 | 34.4 | 227 | 0 | -- | - | |||
| > brw:GOP56_21610(181) | 140 | 30.7 | 227 | 18 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ica:Intca_0653(255) | 150 | 36.0 | 227 | 17 | -- | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > rant:RHODO2019_01705(?) | 154 | 34.4 | 227 | 0 | -- | - | |||
| > bbe:BBR47_10170(185) | 144 | 31.9 | 226 | 32 | -- | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mvq:MYVA_1098(174) | 157 | 31.2 | 226 | 4 | -- | K03088 | rpoE | RNA polymerase sigma24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nmar:HPC71_01970(253) | 158 | 35.4 | 226 | 0 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > aef:GEV26_15875(232) | 155 | 34.2 | 225 | 6 | -- | sigma-70 family RNA polymerase sigma factor | |||
| > tis:P3962_00150(169) | 154 | 31.2 | 225 | 3 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |