GFIT result for T05022

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

ngv:CDO52_22140
(303 a.a.)
 
--
 
K01971  ligD  ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> pmad:BAY61_01230(291)28563.51220(601)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sen:SACE_3394(292)28859.41152(574)3--    ATP-dependent DNA ligase
> amd:AMED_5203(287)28658.01136(534)11-> K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amm:AMES_5141(287)28658.01136(534)11-> K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amn:RAM_26505(287)28658.01136(534)11-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amz:B737_5141(287)28658.01136(534)11-> K01971  ligD lig; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amyc:CU254_25880(287)28756.81129(519)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aey:CDG81_12940(303)30147.8931(101)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tee:Tel_12775(305)30148.5929
0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sld:T261_1305(310)30049.7925(311)2-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2125(295)28748.1904
0-> K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acad:UA74_13140(304)30345.9901(352)0-- K01971  ligD DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acti:UA75_13220(304)30345.9901(352)0-- K01971  ligD DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rbar:AWN76_001560(303)30047.3899(796)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahg:AHOG_12440(304)30145.5897(359)0-- K01971  ligD ykoU1; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sauo:BV401_23550(314)30546.9883(329)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> src:M271_24695(312)30546.6879(309)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7781(317)30543.6876(385)1-> K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svt:SVTN_30635(309)31246.5872(284)5-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hbe:BEI_0346(309)30047.7868
0-> K01971  ligD ligD1; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> grs:C7S20_03825(305)30544.9866(314)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> svl:Strvi_0339(312)30545.6866(307)9-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blin:BLSMQ_1370(299)30346.2864(338)0-> K01971  ligD ATP-dependent DNA ligase LigC; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgv:B1H19_08155(312)30444.7858(223)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ahm:TL08_12295(305)29245.5853(270)0-- K01971  ligD DNA ligase D, polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strf:ASR50_29170(308)30645.8853(256)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1966(298)28545.3834
0-> K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sls:SLINC_6916(312)30341.6834(251)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stro:STRMOE7_06835(317)30344.2834(183)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> stsi:A4E84_33405(319)31542.9834(243)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gfl:GRFL_1807(302)29143.3829(268)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strd:NI25_05905(304)30145.2828(233)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slv:SLIV_05935(319)30743.6824(245)6-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msa:Mycsm_03038(295)28942.9822(225)4-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sco:SCO6498(319)30743.6822(243)10-- K01971  ligD SC1E6.07; hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salb:XNR_4488(313)30345.5818(207)17-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sho:SHJGH_7216(311)30743.0817(210)12-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shy:SHJG_7456(311)30743.0817(210)12-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> slc:SL103_13250(317)30643.5813(163)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sle:sle_12820(311)30944.3812(209)0-- K01971  ligD sle_12820; Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mter:4434518_03028(319)29743.1811(199)0-- K01971  ligD DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scx:AS200_10695(301)29445.6811(229)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlt:VC82_553(323)29242.8808
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mjd:JDM601_3038(301)29744.1807(209)3-- K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spav:Spa2297_27050(309)30643.1804(229)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> samb:SAM23877_6202(312)31143.7803(208)15-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dew:DGWBC_0115(337)28343.5802
0-- K01971  ligD ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ssia:A7J05_06180(326)27546.5799(256)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sgu:SGLAU_27360(308)30844.2798(200)4-- K01971  ligD DNA polymerase LigD, polymerase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> srw:TUE45_07099(311)30542.6797(203)0-- K01971  ligD Putative DNA ligase-like protein/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scw:TU94_27575(303)29844.6792(189)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> spri:SPRI_6912(306)30343.2791(168)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sve:SVEN_0608(309)30044.7786(200)9-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mit:OCO_29900(296)29243.2781(173)3-> K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfk:KY5_6844(313)27744.0771(219)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mie:LG41_14155(296)29242.8770(162)4-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mir:OCQ_30560(296)29242.8770(163)4-> K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmm:W7S_14835(296)29242.8770(163)3-> K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mchi:AN480_15580(296)29242.8769(164)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scb:SCAB_17401(329)27446.7769(200)24-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myo:OEM_29120(296)29242.8765(158)3-> K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfo:Dform_01625(302)29440.8762
0-- K01971  ligD ligD; ATP-dependent DNA ligase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mia:OCU_29810(296)29242.5762(155)5-> K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mmal:CKJ54_13685(296)29342.3760(162)0-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> strt:A8713_26490(307)30642.2752(153)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fsi:Flexsi_0431(291)27539.6749
0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smal:SMALA_3989(257)25549.0748(194)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llo:LLO_1004(293)28339.6740
0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lsh:CAB17_09265(293)28439.4735
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> snw:BBN63_03335(380)28541.4719(130)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_167(313)29837.2712
0-> K01971  ligD ykoU; Eukaryotic-type DNA primase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_02362(289)28639.9695(90)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> afw:Anae109_3248(328)29240.8686(6)7-- K01971  ligD DNA polymerase LigD polymerase domain; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sna:Snas_2802(302)29040.0682(126)1-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sals:SLNWT_6707(304)29540.3681(118)8-- K01971  ligD DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> opr:Ocepr_0487(299)29839.9678(573)1-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dku:Desku_0985(311)28137.7670(570)0-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mcg:GL4_0154(848)27838.1668(50)1-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> plh:VT85_02045(484)28939.1667
0-- K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ghi:107941224(850)29738.4659
0--    multifunctional non-homologous end joining protein LigD-like
> mft:XA26_05350(411)30135.9653(41)0--    ATP-dependent DNA ligase
> nda:Ndas_0258(292)30238.7648(541)6-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cpi:Cpin_0998(861)30232.1647(141)3-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> myv:G155_02955(409)30135.9647(32)3--    DNA polymerase
> esj:SJ05684_c27600(864)27040.4645(83)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nfa:NFA_25590(333)30135.9644(107)0--    hypothetical protein
> nfr:ERS450000_01537(333)30135.5644(112)0--    Putative DNA ligase-like protein Rv0938/MT0965
> stre:GZL_01248(337)29039.0644(115)4--    ATP-dependent DNA ligase
> aja:AJAP_24085(335)29335.8643(79)7--    ATP-dependent DNA ligase
> aoi:AORI_5277(335)29636.5643(63)8--    lig; DNA ligase (ATP)
> dau:Daud_0598(314)28037.9643
0-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfh:SFHH103_02797(865)27338.1643(103)3-- K01971  ligD putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cmag:CBW24_07195(818)27839.6642()0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dfe:Dfer_3085(299)26935.7642(105)1-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)27637.3642()2-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> salu:DC74_7354(337)28739.0642(109)5--    hypothetical protein
> kra:Krad_0652(341)30538.7641(73)1->    DNA primase small subunit
> rhi:NGR_c27850(865)27338.1641(96)7-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sall:SAZ_38070(331)28439.1641(108)5--    ATP-dependent DNA ligase
> snr:SNOUR_05270(331)28439.1641(113)0--    DNA ligase D, polymerase domain
... ... ...