GFIT result for
pdc
|
GFIT result for
pdc
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| pdc:CDIF630_03758 (633 a.a.) |
-- |
transcription antiterminator, PTS operon regulator | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > cdf:CD630_34470(633) | 633 | 100.0 | 4025 | 20 | <> | Transcription antiterminator, PTS operon regulator | |||
| > pdf:CD630DERM_34470(633) | 633 | 100.0 | 4025 | 20 | <> | Transcription antiterminator, PTS operonregulator | |||
| > cdc:CD196_3223(633) | 633 | 99.7 | 4014 | 19 | <> | putative transcription antiterminator | |||
| > cdl:CDR20291_3269(633) | 633 | 99.7 | 4014 | 19 | <> | putative transcription antiterminator | |||
| > eraf:J9537_02250(619) | 633 | 38.5 | 1392 | 23 | <- | PTS sugar transporter subunit IIA | |||
| > cbv:U729_921(630) | 634 | 38.8 | 1379 | 1 | <- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > eav:EH197_09095(621) | 632 | 37.2 | 1365 | 23 | <- | K03491 | licR | PRD domain-containing protein; K03491 probable licABCH operon transcriptional regulator | |
| > cint:HZF06_07370(635) | 640 | 34.8 | 1336 | 15 | <- | PTS sugar transporter subunit IIA | |||
| > aarg:Aargi30884_19840(634) | 644 | 35.4 | 1271 | 4 | <- | K03491 | licR | transcription antiterminator BglG; K03491 probable licABCH operon transcriptional regulator | |
| > erl:AOC36_02885(622) | 632 | 34.7 | 1265 | 9 | <- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > fit:Fi14EGH31_27180(635) | 646 | 33.3 | 1243 | 3 | <- | K03491 | licR | transcription antiterminator BglG; K03491 probable licABCH operon transcriptional regulator | |
| > ciu:G4D55_12920(625) | 628 | 33.4 | 1232 | 32 | <- | K03491 | licR | transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > erb:A4V01_15785(625) | 628 | 33.4 | 1225 | 34 | <- | K03491 | licR | sugar lyase; K03491 probable licABCH operon transcriptional regulator | |
| > absi:A9CBEGH2_22980(632) | 642 | 32.6 | 1223 | 2 | <- | K03491 | licR | transcription antiterminator BglG; K03491 probable licABCH operon transcriptional regulator | |
| > ehn:H9Q80_09415(627) | 642 | 34.6 | 1212 | 16 | <- | transcription antiterminator | |||
| > lcg:L3BBH23_07920(633) | 638 | 31.2 | 1209 | 10 | <- | K03491 | licR | transcription antiterminator BglG; K03491 probable licABCH operon transcriptional regulator | |
| > ahq:NMU03_04350(?) | 637 | 30.1 | 1192 | 0 | -- | - | |||
| > geg:LK443_01095(?) | 639 | 33.6 | 1171 | 0 | -- | - | |||
| > cdy:F3K33_13680(635) | 640 | 30.6 | 1148 | 5 | <- | K03491 | licR | transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > cbe:Cbei_2711(635) | 640 | 30.9 | 1146 | 8 | <- | K03491 | licR | transcriptional antiterminator, BglG; K03491 probable licABCH operon transcriptional regulator | |
| > cbz:Cbs_2711(635) | 640 | 30.9 | 1146 | 8 | <- | K03491 | licR | transcriptional antiterminator, BglG; K03491 probable licABCH operon transcriptional regulator | |
| > cmit:NQ499_11830(634) | 638 | 30.6 | 1120 | 2 | <- | PTS sugar transporter subunit IIA | |||
| > pdh:B9T62_12655(639) | 649 | 32.0 | 1061 | 3 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > pod:PODO_22670(640) | 649 | 31.7 | 1042 | 1 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > lcr:LCRIS_01431(631) | 636 | 31.8 | 1032 | 1 | <- | K03491 | licR | licR; PTS system, IIA component; K03491 probable licABCH operon transcriptional regulator | |
| > paee:R70331_25295(639) | 650 | 30.3 | 989 | 2 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > paea:R70723_26590(639) | 650 | 30.0 | 971 | 3 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > lft:FG051_11210(648) | 648 | 28.9 | 959 | 0 | -- | K03491 | licR | transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > paeh:H70357_11375(639) | 649 | 29.7 | 957 | 2 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > egv:EGCR1_16565(641) | 646 | 29.6 | 953 | 17 | -- | K03491 | licR | transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lgz:NCTC10812_00120(635) | 643 | 29.9 | 947 | 12 | -- | K03491 | licR | licR_2; Probable licABCH operon regulator; K03491 probable licABCH operon transcriptional regulator | |
| > lrg:LRHM_0344(597) | 636 | 28.6 | 938 | 3 | <- | K03491 | licR | putative transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lrh:LGG_00357(597) | 636 | 28.6 | 938 | 3 | <- | K03491 | licR | Transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lra:LRHK_352(597) | 636 | 29.2 | 933 | 7 | <- | K03491 | licR | deoR-like helix-turn-helix domain protein; K03491 probable licABCH operon transcriptional regulator | |
| > lrc:LOCK908_0348(597) | 636 | 29.2 | 933 | 7 | <- | K03491 | licR | Transcriptional antiterminator of lichenan operon, BglG family; K03491 probable licABCH operon transcriptional regulator | |
| > lrl:LC705_00342(597) | 636 | 29.1 | 929 | 8 | <- | K03491 | licR | Transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lcb:LCABL_03050(597) | 636 | 28.9 | 927 | 7 | <- | K03491 | licR | frvR; PRD-and EIIAMtl/Fru-containing transcription ativator; K03491 probable licABCH operon transcriptional regulator | |
| > lce:LC2W_0294(597) | 636 | 28.9 | 927 | 7 | <- | K03491 | licR | bglG; Putative transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lcs:LCBD_0303(597) | 636 | 28.9 | 927 | 7 | <- | K03491 | licR | bglG; Putative transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lpq:AF91_00845(597) | 636 | 28.9 | 927 | 3 | <- | K03491 | licR | transcriptional antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lpap:LBPC_0294(597) | 636 | 28.9 | 926 | 4 | <- | K03491 | licR | putative transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lcl:LOCK919_0328(597) | 636 | 28.9 | 924 | 10 | <- | K03491 | licR | Transcriptional antiterminator of lichenan operon, BglG family; K03491 probable licABCH operon transcriptional regulator | |
| > lcx:LCA12A_2546(597) | 636 | 28.9 | 924 | 8 | <- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lcw:BN194_03100(602) | 636 | 28.8 | 923 | 7 | <- | K03491 | licR | Putative uncharacterized protein; K03491 probable licABCH operon transcriptional regulator | |
| > lpi:LBPG_02477(602) | 636 | 28.8 | 920 | 10 | <- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > lcz:LCAZH_0336(597) | 636 | 28.5 | 916 | 10 | <- | K03491 | licR | transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lro:LOCK900_0336(597) | 636 | 28.3 | 916 | 7 | <- | K03491 | licR | Transcriptional antiterminator of lichenan operon, BglG family; K03491 probable licABCH operon transcriptional regulator | |
| > lhn:LHUE1_001399(?) | 636 | 27.2 | 874 | 0 | -- | - | |||
| > acit:HPK19_19880(646) | 647 | 27.2 | 859 | 9 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > gaj:MY490_01765(646) | 646 | 26.2 | 851 | 4 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > lze:KG087_01560(597) | 636 | 26.9 | 836 | 5 | <- | K03491 | licR | PTS sugar transporter subunit IIA; K03491 probable licABCH operon transcriptional regulator | |
| > ess:ATZ33_09895(648) | 646 | 25.9 | 785 | 9 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > hov:EQF90_004280(?) | 643 | 27.8 | 784 | 0 | -- | - | |||
| > toc:Toce_0541(655) | 653 | 26.5 | 766 | 6 | -- | transcriptional antiterminator, BglG | |||
| > cspo:QNI18_00835(662) | 655 | 27.3 | 753 | 0 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > tto:Thethe_01705(648) | 651 | 27.6 | 746 | 13 | -- | transcriptional antiterminator | |||
| > csr:Cspa_c29080(654) | 640 | 26.6 | 743 | 6 | -- | K03491 | licR | licR3; putative licABCH operon regulator; K03491 probable licABCH operon transcriptional regulator | |
| > seqo:SE1039_01560(629) | 631 | 27.4 | 736 | 6 | -- | K03491 | licR | transcriptional antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > blh:BaLi_c40990(648) | 650 | 25.2 | 719 | 7 | -- | K03491 | licR | licR; transcriptional activator LicR; K03491 probable licABCH operon transcriptional regulator | |
| > gmc:GY4MC1_1448(638) | 649 | 27.0 | 719 | 5 | -- | K03491 | licR | transcriptional antiterminator, BglG; K03491 probable licABCH operon transcriptional regulator | |
| > ojd:NP439_03020(634) | 650 | 26.3 | 719 | 10 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > ptl:AOT13_15100(638) | 649 | 27.0 | 719 | 6 | -- | K03491 | licR | PTS sugar transporter; K03491 probable licABCH operon transcriptional regulator | |
| > vil:CFK37_17770(661) | 649 | 25.6 | 713 | 2 | -- | K03491 | licR | PTS fructose transporter subunit IIA; K03491 probable licABCH operon transcriptional regulator | |
| > oon:NP440_19130(640) | 656 | 26.4 | 711 | 15 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > nnv:QNH39_01175(640) | 640 | 23.6 | 710 | 0 | -- | BglG family transcription antiterminator | |||
| > bacq:DOE78_05960(641) | 647 | 25.7 | 709 | 8 | -- | K03491 | licR | PTS fructose transporter subunit IIA; K03491 probable licABCH operon transcriptional regulator | |
| > bag:Bcoa_0787(620) | 636 | 25.6 | 709 | 1 | -- | K03491 | licR | PTS modulated transcriptional regulator, MtlR family; K03491 probable licABCH operon transcriptional regulator | |
| > csep:CP523_05820(649) | 657 | 26.6 | 709 | 8 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > mlen:H3V22_10735(625) | 639 | 26.3 | 706 | 5 | -- | K03491 | licR | transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > too:C7K38_06080(642) | 650 | 24.6 | 706 | 12 | -- | K03491 | licR | PTS fructose transporter subunit IIA; K03491 probable licABCH operon transcriptional regulator | |
| > acop:RI196_09190(?) | 646 | 26.3 | 704 | 0 | -- | - | |||
| > bld:BLi04090(649) | 651 | 25.2 | 703 | 5 | -- | K03491 | licR | licR; transcriptional activator LicR; K03491 probable licABCH operon transcriptional regulator | |
| > bli:BL03840(649) | 651 | 25.2 | 703 | 5 | -- | K03491 | licR | licR; transcriptional regulator; K03491 probable licABCH operon transcriptional regulator | |
| > sscu:CEP64_10915(625) | 626 | 26.7 | 703 | 10 | -- | K03491 | licR | PRD domain-containing protein; K03491 probable licABCH operon transcriptional regulator | |
| > faf:OE104_01940(641) | 644 | 27.2 | 700 | 8 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > pta:HPL003_08690(655) | 625 | 24.2 | 700 | 7 | -- | DeoR/PRD/PTS regulatory domain-containing protein | |||
| > fhl:OE105_08730(644) | 647 | 26.6 | 695 | 6 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > bcir:C2I06_17320(637) | 649 | 27.0 | 694 | 16 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > pxl:BS614_12210(655) | 625 | 24.2 | 694 | 4 | -- | transcriptional regulator | |||
| > vig:BKP57_15040(658) | 661 | 26.3 | 694 | 13 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > tit:Thit_0523(651) | 658 | 27.2 | 692 | 16 | -- | PTS modulated transcriptional regulator, MtlR family | |||
| > paih:ASL14_10700(655) | 624 | 23.6 | 691 | 6 | -- | transcriptional regulator | |||
| > apak:AP3564_00455(634) | 644 | 24.7 | 690 | 4 | -- | K03491 | licR | transcriptional antiterminator BglG; K03491 probable licABCH operon transcriptional regulator | |
| > bshi:LGQ02_09670(639) | 642 | 24.0 | 690 | 0 | -- | BglG family transcription antiterminator | |||
| > rax:KO561_18510(644) | 653 | 25.0 | 690 | 4 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > bgy:BGLY_4506(648) | 642 | 25.1 | 689 | 6 | -- | K03491 | licR | BigG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > cfir:NAF01_02410(640) | 645 | 24.0 | 689 | 6 | -- | BglG family transcription antiterminator | |||
| > rmf:D5E69_02920(647) | 630 | 23.8 | 689 | 6 | -- | PRD domain-containing protein | |||
| > bck:BCO26_0406(658) | 635 | 25.7 | 687 | 1 | -- | K03491 | licR | licR; PTS modulated transcriptional regulator, MtlR family; K03491 probable licABCH operon transcriptional regulator | |
| > gfe:Gferi_12780(635) | 642 | 24.9 | 686 | 13 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > beo:BEH_19145(646) | 653 | 24.7 | 685 | 4 | -- | K03491 | licR | PTS fructose transporter subunit IIA; K03491 probable licABCH operon transcriptional regulator | |
| > bson:S101395_00299(643) | 655 | 25.3 | 685 | 7 | -- | K03491 | licR | putative licABCH operon regulator; K03491 probable licABCH operon transcriptional regulator | |
| > vnt:OLD84_15975(643) | 648 | 25.2 | 683 | 5 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > ppq:PPSQR21_002300(655) | 624 | 23.2 | 682 | 5 | -- | bglG; DeoR/PRD/PTS regulatory domain-containing protein | |||
| > hnz:P9989_16560(641) | 651 | 26.4 | 681 | 5 | -- | K03491 | licR | BglG family transcription antiterminator; K03491 probable licABCH operon transcriptional regulator | |
| > pkb:B4V02_24060(655) | 627 | 24.4 | 680 | 9 | -- | transcriptional regulator | |||
| > parg:PspKH34_17960(661) | 652 | 24.8 | 678 | 9 | -- | licR; putative licABCH operon regulator | |||
| > shv:AAT16_12855(634) | 646 | 25.4 | 677 | 5 | -- | K03491 | licR | hypothetical protein; K03491 probable licABCH operon transcriptional regulator | |
| > ppeo:ABE82_01200(655) | 625 | 23.0 | 676 | 10 | -- | DeoR faimly transcriptional regulator | |||
| > bthv:CQJ30_15695(637) | 653 | 27.1 | 674 | 6 | -- | K03491 | licR | PTS sugar transporter; K03491 probable licABCH operon transcriptional regulator | |