GFIT result for pgm |
[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
pgm:PGRAT_14595 (287 a.a.) |
--  |
  |   | ATP-dependent DNA ligase | |||||
DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
---|---|---|---|---|---|---|---|---|---|
> paen:P40081_15495(287) | 286 | 89.5 | 1751 | 2 | -- | ATP-dependent DNA ligase | |||
> ptri:KDC22_14590(287) | 287 | 86.1 | 1705 | 1 | -- | ATP-dependent DNA ligase | |||
> pdh:B9T62_09325(287) | 287 | 85.7 | 1688 | 2 | -- | ATP-dependent DNA ligase | |||
> ppab:KET34_10625(?) | 287 | 72.5 | 1435 | 0 | -- | - | |||
> ppo:PPM_2737(286) | 288 | 69.1 | 1383 | 3 | -- | ligB3; ATP-dependent DNA ligase | |||
> psab:PSAB_20545(289) | 291 | 69.1 | 1372 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
> pson:JI735_01345(291) | 292 | 66.8 | 1349 | 2 | -- | ATP-dependent DNA ligase | |||
> pib:BBD41_03215(288) | 285 | 66.0 | 1332 | 3 | -- | ATP-dependent DNA ligase | |||
> plen:EIM92_01115(287) | 287 | 64.8 | 1326 | 1 | -- | ATP-dependent DNA ligase | |||
> gym:GYMC10_0669(288) | 288 | 64.9 | 1310 | 1 | -- | ATP dependent DNA ligase | |||
> pmq:PM3016_2376(284) | 286 | 61.2 | 1149 | 3 | -- | ATP dependent DNA ligase | |||
> pms:KNP414_02090(284) | 286 | 61.2 | 1149 | 3 | -- | ATP dependent DNA ligase | |||
> pmw:B2K_12050(284) | 286 | 61.2 | 1149 | 3 | -- | ATP-dependent DNA ligase | |||
> pui:PUW25_27360(287) | 287 | 54.4 | 1055 | 1 | -- | RNA ligase family protein | |||
> paun:MJA45_18315(?) | 283 | 54.4 | 1043 | 0 | -- | - | |||
> cchl:FPL14_27395(283) | 290 | 50.0 | 947 | 1 | -- | ATP-dependent DNA ligase | |||
> pnp:IJ22_10880(287) | 286 | 47.2 | 911 | 1 | -- | ATP-dependent DNA ligase | |||
> pcel:HUB94_00285(282) | 290 | 44.1 | 862 | 1 | -- | ATP-dependent DNA ligase | |||
> cohn:KCTCHS21_40110(283) | 290 | 43.8 | 839 | 1 | -- | ligB; SPBc2 prophage-derived DNA ligase-like protein LigB | |||
> pchi:PC41400_14640(272) | 283 | 47.7 | 828 | 2 | -- | DNA ligase | |||
> prz:GZH47_32380(273) | 285 | 48.8 | 811 | 1 | -- | DNA ligase | |||
> cheb:HH215_34750(284) | 290 | 43.4 | 809 | 1 | -- | ATP-dependent DNA ligase | |||
> pjd:Pjdr2_1127(287) | 288 | 44.1 | 791 | 1 | -- | ATP dependent DNA ligase | |||
> bon:A361_10965(271) | 290 | 46.9 | 786 | 2 | -- | ATP-dependent DNA ligase | |||
> pspn:L1F29_24585(?) | 290 | 39.3 | 752 | 0 | -- | - | |||
> cpss:M5V91_29800(?) | 292 | 42.1 | 736 | 0 | -- | - | |||
> pvo:PVOR_28629(194) | 189 | 57.1 | 732 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
> ndt:L1999_02135(273) | 292 | 45.2 | 728 | 2 | -- | ATP-dependent DNA ligase | |||
> csoa:LIS82_07425(273) | 289 | 42.2 | 722 | 2 | -- | ATP-dependent DNA ligase | |||
> hamy:MUO15_20960(?) | 287 | 40.1 | 717 | 0 | -- | - | |||
> bao:BAMF_0926(270) | 283 | 43.5 | 696 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
> ncm:QNK12_06440(274) | 288 | 40.3 | 686 | 0 | -- | ATP-dependent DNA ligase | |||
> lfb:C1X05_12435(302) | 257 | 43.6 | 672 | 2 | -- | hypothetical protein | |||
> acit:HPK19_19530(283) | 287 | 37.3 | 658 | 1 | -- | ATP-dependent DNA ligase | |||
> gaj:MY490_01485(283) | 287 | 37.3 | 644 | 1 | -- | hypothetical protein | |||
> ppm:PPSC2_28365(288) | 289 | 40.1 | 643 | 1 | -- | hypothetical protein | |||
> rmf:D5E69_22740(281) | 285 | 40.0 | 643 | 0 | -- | ATP-dependent DNA ligase | |||
> bcl:ABC2809(277) | 288 | 39.9 | 638 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
> bacl:BS34A_22670(270) | 283 | 40.3 | 635 | 1 | -- | ligB; DNA ligase-like protein LigB | |||
> bsh:BSU6051_20500(270) | 283 | 40.3 | 635 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase LigB | |||
> bsq:B657_20500(270) | 283 | 40.3 | 635 | 1 | -- | ligB; Bacteriophage SPbeta DNA ligase | |||
> bsu:BSU20500(270) | 283 | 40.3 | 635 | 1 | -- | ligB; DNA ligase-like protein LigB | |||
> bsul:BSUA_02207(270) | 283 | 40.3 | 635 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
> bsut:BSUB_02207(270) | 283 | 40.3 | 635 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
> pthi:NDS46_31860(289) | 293 | 38.9 | 635 | 1 | -- | DNA polymerase LigD | |||
> vg:1261486(270) | 283 | 40.3 | 635 | 87 | -- | yoqV, SPBc2p117; Bacillus phage SPBc2; SPBc2 prophage-derived DNA ligase-like protein LigB | |||
> bamy:V529_20630(270) | 284 | 40.5 | 631 | 2 | -- | ligB; ATP-dependent DNA ligase | |||
> bteq:G4P54_09600(270) | 284 | 39.8 | 630 | 1 | -- | ATP-dependent DNA ligase | |||
> psua:FLK61_00230(270) | 284 | 38.7 | 627 | 0 | -- | ATP-dependent DNA ligase | |||
> baz:BAMTA208_06575(270) | 284 | 39.1 | 626 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
> bql:LL3_02285(270) | 284 | 39.1 | 626 | 1 | -- | ligB; SPBc2 prophage-derived DNA ligase-like protein ligB | |||
> bxh:BAXH7_01346(270) | 284 | 39.1 | 626 | 1 | -- | yoqV; hypothetical protein | |||
> bama:RBAU_2060(270) | 284 | 38.7 | 618 | 1 | -- | ligB; bacteriophage SPbeta DNA ligase | |||
> bya:BANAU_1788(270) | 284 | 39.1 | 618 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
> bamb:BAPNAU_1647(270) | 284 | 38.7 | 615 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
> psop:KP014_20345(275) | 291 | 38.5 | 615 | 1 | -- | DNA ligase | |||
> bacs:AUL54_20235(270) | 284 | 38.4 | 613 | 1 | -- | ATP-dependent DNA ligase | |||
> bld:BLi01538(269) | 286 | 39.9 | 611 | 1 | -- | ligB; phage ATP-dependent DNA ligase LigB | |||
> bli:BL00865(269) | 286 | 39.9 | 611 | 1 | -- | ligB; DNA ligase,phage related | |||
> dai:Desaci_4757(289) | 293 | 41.3 | 610 | 1 | -- | ATP dependent DNA ligase-like protein | |||
> bsaf:BSL056_08940(270) | 283 | 37.8 | 607 | 1 | -- | ATP-dependent DNA ligase | |||
> bson:S101395_02792(270) | 284 | 37.7 | 607 | 1 | -- | ligD; DNA ligase (ATP) | |||
> afas:NZD89_27935(280) | 279 | 38.4 | 594 | 5 | -- | hypothetical protein | |||
> bgy:BGLY_2023(270) | 284 | 37.0 | 588 | 1 | -- | ATP-dependent DNA ligase | |||
> bqy:MUS_2008(265) | 279 | 38.4 | 584 | 1 | -- | ligB; ATP-dependent DNA ligase | |||
> pbac:HUB98_05725(270) | 285 | 37.2 | 560 | 1 | -- | hypothetical protein | |||
> pprt:ET464_05550(290) | 287 | 34.5 | 559 | 0 | -- | hypothetical protein | |||
> lyb:C3943_17795(291) | 270 | 36.7 | 556 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> lpak:GDS87_11990(292) | 271 | 38.0 | 553 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bbe:BBR47_29440(153) | 141 | 55.3 | 543 | 1 | -- | hypothetical protein | |||
> lsp:Bsph_p130(282) | 285 | 34.4 | 543 | 2 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> lagr:FJQ98_16255(292) | 270 | 35.9 | 540 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bpf:BpOF4_20089(222) | 231 | 36.8 | 537 | 0 | -- | ligB; ATP-dependent DNA ligase | |||
> adau:NZD86_09185(294) | 286 | 35.3 | 528 | 1 | -- | DNA ligase | |||
> lys:LBYS11_16190(291) | 284 | 34.2 | 521 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> plw:D5F53_33225(292) | 292 | 32.5 | 519 | 1 | -- | hypothetical protein | |||
> bco:Bcell_0182(300) | 288 | 32.6 | 518 | 1 | -- | K01971 | ligD | ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> aza:AZKH_2968(851) | 296 | 36.1 | 515 | 0 | -- | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> liu:OU989_23080(?) | 287 | 34.1 | 512 | 0 | -- | - | |||
> tum:CBW65_10305(351) | 291 | 36.4 | 512 | 1 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> azd:CDA09_15860(928) | 300 | 36.0 | 503 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> palb:EJC50_29255(305) | 290 | 33.4 | 500 | 1 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> afw:Anae109_0939(847) | 297 | 35.4 | 492 | 78 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bgw:VE98_C0001G0251(307) | 297 | 32.3 | 487 | 0 | -- | K01971 | ligD | ATP dependent DNA ligase, DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> hoh:Hoch_3330(896) | 302 | 34.4 | 487 | 65 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> mhai:OHB01_28760(?) | 302 | 35.1 | 473 | 0 | -- | - | |||
> dfg:B0537_11885(280) | 279 | 33.3 | 472 | 0 | -- | hypothetical protein | |||
> cati:CS0771_70860(335) | 304 | 32.2 | 470 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> lsx:H8B22_07395(907) | 298 | 33.6 | 470 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> ppeo:ABE82_26745(297) | 294 | 32.3 | 470 | 1 | -- | hypothetical protein | |||
> bsol:FSW04_15890(798) | 301 | 33.2 | 467 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> satk:SA2016_3491(884) | 300 | 33.7 | 467 | 29 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> bala:DSM104299_02990(808) | 305 | 33.8 | 464 | 0 | -- | ATP-dependent DNA ligase | |||
> ppoy:RE92_25010(297) | 294 | 32.3 | 464 | 1 | -- | hypothetical protein | |||
> snig:HEK616_47990(323) | 302 | 32.8 | 462 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> lare:HIV01_004680(904) | 304 | 32.2 | 461 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> sine:KI385_35615(324) | 302 | 32.8 | 460 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> actn:L083_1682(393) | 299 | 34.8 | 459 | 18 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
> seng:OJ254_28735(?) | 302 | 32.8 | 458 | 0 | -- | - | |||
> aory:AMOR_35880(844) | 302 | 34.1 | 457 | 58 | -- | ATP-dependent DNA ligase |