GFIT result for
pmm
|
GFIT result for
pmm
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| pmm:PMM1679 (443 a.a.) |
-- |
lig; ATP-dependent DNA ligase | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > pmc:P9515_18701(412) | 412 | 87.4 | 2473 | 0 | <> | ATP-dependent DNA ligase | |||
| > pmi:PMT9312_1772(437) | 436 | 81.2 | 2418 | 1 | <> | ATP-dependent DNA ligase | |||
| > pmg:P9301_18701(437) | 436 | 80.5 | 2399 | 0 | <> | ATP-dependent DNA ligase | |||
| > pmh:P9215_19531(437) | 436 | 80.5 | 2396 | 0 | <- | ATP-dependent DNA ligase | |||
| > pmb:A9601_18891(437) | 436 | 79.6 | 2390 | 0 | <> | ATP-dependent DNA ligase | |||
| > prc:EW14_2048(437) | 436 | 79.6 | 2377 | 0 | <> | ATP-dependent DNA ligase | |||
| > vg:17526703(423) | 442 | 31.4 | 702 | 737 | -- | CampHawk_156; Bacillus phage CampHawk; DNA ligase | |||
| > lmu:LBLM1_11360(449) | 430 | 27.9 | 488 | 0 | -- | ligase | |||
| > sdp:NCTC12225_01125(441) | 455 | 28.6 | 461 | 0 | -- | phage ATP-dependent DNA ligase protein | |||
| > esm:O3M_26019(440) | 458 | 27.5 | 430 | 0 | -- | putative DNA ligase | |||
| > sauz:SAZ172_2077(432) | 442 | 27.1 | 427 | 0 | -- | DNA ligase, phage-associated | |||
| > suw:SATW20_20610(432) | 442 | 27.1 | 427 | 0 | -- | phage ATP-dependent DNA ligase protein | |||
| > ser:SERP1534(432) | 439 | 26.7 | 424 | 1 | -- | DNA ligase, ATP-dependent | |||
| > bacy:QF06_20415(426) | 441 | 24.9 | 390 | 1 | -- | hypothetical protein | |||
| > ypm:YP_pMT090(440) | 435 | 25.5 | 382 | 0 | -- | putative DNA ligase | |||
| > ypp:YPDSF_4101(440) | 432 | 24.8 | 380 | 0 | -- | DNA ligase | |||
| > eclx:LI66_23945(440) | 435 | 25.5 | 379 | 0 | -- | DNA ligase | |||
| > fpa:FPR_23300(443) | 452 | 24.8 | 377 | 0 | -- | ATP-dependent DNA ligase | |||
| > mpt:Mpe_B0266(455) | 413 | 25.9 | 372 | 1 | -- | hypothetical protein | |||
| > sty:HCM2.0035c(440) | 435 | 25.7 | 371 | 0 | -- | putative DNA ligase | |||
| > kpm:KPHS_p100410(440) | 441 | 26.5 | 367 | 0 | -- | putative DNA ligase | |||
| > meta:Y590_25010(466) | 465 | 25.8 | 367 | 0 | -- | hypothetical protein | |||
| > shu:SHYC_05295(429) | 448 | 26.8 | 362 | 0 | -- | lig; DNA ligase | |||
| > abaz:P795_18285(471) | 446 | 25.6 | 357 | 0 | -- | hypothetical protein | |||
| > abr:ABTJ_p2010(567) | 446 | 25.6 | 357 | 0 | -- | ATP dependent DNA ligase domain | |||
| > ips:CfP315_0212(?) | 299 | 28.1 | 342 | 0 | -- | - | |||
| > dtl:H8F01_00235(459) | 442 | 26.2 | 341 | 0 | -- | hypothetical protein | |||
| > lsj:LSJ_3109c(384) | 381 | 26.5 | 340 | 0 | -- | Putative phage ligase protein | |||
| > metm:MSMTP_0783(534) | 300 | 29.7 | 312 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mbar:MSBR2_1391(568) | 306 | 28.1 | 311 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mby:MSBRM_1019(568) | 306 | 28.1 | 311 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > hsr:HSBAA_29110(142) | 131 | 41.2 | 310 | 0 | -- | hypothetical protein | |||
| > mbak:MSBR3_1350(568) | 298 | 29.2 | 310 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mfz:AOB57_011735(568) | 305 | 27.5 | 309 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mzi:HWN40_04575(563) | 306 | 29.7 | 309 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mba:Mbar_A1899(568) | 310 | 29.7 | 308 | 1 | -- | K10747 | LIG1 | DNA ligase (ATP); K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mbw:MSBRW_2836(568) | 310 | 29.7 | 308 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mmav:RE476_05575(?) | 306 | 29.1 | 306 | 0 | -- | - | |||
| > mvc:MSVAZ_2465(568) | 305 | 27.5 | 305 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mek:MSKOL_2483(568) | 305 | 27.9 | 303 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mac:MA_2571(568) | 298 | 28.5 | 302 | 2 | -- | K10747 | LIG1 | lig; DNA ligase (ATP); K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mseb:RE474_01875(?) | 305 | 29.8 | 300 | 0 | -- | - | |||
| > mhor:MSHOH_2566(568) | 298 | 28.9 | 298 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mef:MSWH1_1448(568) | 298 | 28.5 | 296 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > meq:MSWHS_1883(568) | 298 | 28.5 | 296 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > msw:MSSIT_2768(568) | 298 | 28.5 | 296 | 2 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > msz:MSSIH_2734(568) | 298 | 28.5 | 296 | 2 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > msj:MSSAC_3087(568) | 298 | 28.5 | 295 | 2 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > halg:HUG10_20935(510) | 288 | 27.8 | 294 | 1 | -- | hypothetical protein | |||
| > mls:MSLAZ_0929(568) | 305 | 27.5 | 291 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mma:MM_2714(568) | 303 | 28.1 | 288 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mmac:MSMAC_1123(568) | 303 | 28.1 | 288 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mmj:MSMAS_1993(568) | 303 | 28.1 | 288 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mthe:MSTHC_2356(568) | 318 | 26.7 | 288 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mthr:MSTHT_0950(568) | 318 | 26.7 | 288 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > yph:YPC_4846(365) | 352 | 25.0 | 288 | 9 | -- | DNA ligase | |||
| > ypj:CH55_4262(365) | 352 | 25.0 | 288 | 6 | -- | ATP dependent DNA ligase domain protein | |||
| > ypk:Y1095.pl(365) | 352 | 25.0 | 288 | 5 | -- | unknown | |||
| > ypn:YPN_MT0069(345) | 352 | 25.0 | 288 | 0 | -- | DNA ligase | |||
| > mehf:MmiHf6_17640(?) | 298 | 27.2 | 285 | 0 | -- | - | |||
| > habo:JRZ79_03380(560) | 306 | 29.1 | 284 | 9 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > hal:VNG_0881G(561) | 306 | 29.1 | 283 | 7 | -- | K10747 | LIG1 | lig; DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > hanr:LJ422_03600(561) | 306 | 29.1 | 283 | 8 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > hsl:OE_2298F(561) | 306 | 29.1 | 283 | 8 | -- | K10747 | LIG1 | ligB; DNA ligase (ATP); K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > hags:JT689_04885(561) | 306 | 29.1 | 282 | 10 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mpy:Mpsy_0817(574) | 305 | 26.9 | 282 | 0 | -- | K10747 | LIG1 | DNA ligase I, ATP-dependent Dnl1; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mbu:Mbur_1088(567) | 375 | 26.4 | 281 | 0 | -- | K10747 | LIG1 | dnl1; DNA ligase 1, ATP-dependent; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mmet:MCMEM_1588(561) | 306 | 28.1 | 281 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > tic:FH039_12015(559) | 442 | 26.2 | 281 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > thh:CDI07_08445(559) | 441 | 25.4 | 280 | 0 | -- | K10747 | LIG1 | DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > cmr:Cycma_1183(808) | 244 | 30.7 | 279 | 1 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hall:LC1Hm_2068(553) | 295 | 28.5 | 279 | 5 | -- | K10747 | LIG1 | cdc9; ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > thv:ADU37_CDS07660(560) | 477 | 25.8 | 279 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > halt:IM660_08675(506) | 395 | 25.1 | 278 | 6 | -- | ATP-dependent DNA ligase | |||
| > tha:TAM4_1751(562) | 473 | 25.2 | 278 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > trl:A3L10_07920(559) | 441 | 25.2 | 278 | 0 | -- | K10747 | LIG1 | DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mees:MmiEs2_09720(?) | 311 | 25.7 | 277 | 0 | -- | - | |||
| > tlt:OCC_10130(560) | 445 | 27.0 | 277 | 0 | -- | K10747 | LIG1 | DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > halj:G9465_10350(550) | 299 | 29.1 | 276 | 5 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > halm:FCF25_14750(589) | 282 | 29.8 | 276 | 17 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > rsg:JK151_20725(304) | 280 | 27.9 | 276 | 0 | -- | ATP-dependent DNA ligase | |||
| > teu:TEU_01440(559) | 475 | 25.7 | 275 | 0 | -- | K10747 | LIG1 | DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > hlu:LT972_08025(572) | 306 | 27.1 | 274 | 5 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mev:Metev_0890(569) | 306 | 27.5 | 274 | 0 | -- | K10747 | LIG1 | DNA ligase I, ATP-dependent Dnl1; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mhz:Metho_1681(561) | 304 | 28.3 | 274 | 1 | -- | K10747 | LIG1 | ATP-dependent DNA ligase I; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > the:GQS_07890(559) | 441 | 24.7 | 274 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > tnu:BD01_1570(559) | 439 | 25.7 | 274 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > chih:GWR21_20550(855) | 263 | 29.3 | 272 | 2 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pab:PAB2002(559) | 440 | 25.5 | 272 | 0 | -- | K10747 | LIG1 | lig DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > tba:TERMP_01956(561) | 476 | 24.6 | 272 | 2 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > tga:TGAM_1718(559) | 475 | 25.5 | 272 | 0 | -- | K10747 | LIG1 | lig; ATP-dependent DNA ligase (lig); K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > pgin:FRZ67_07570(809) | 283 | 27.6 | 270 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tsi:TSIB_0885(560) | 477 | 26.0 | 270 | 0 | -- | K10747 | LIG1 | DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > hno:LT974_05030(572) | 313 | 25.6 | 269 | 5 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > mtp:Mthe_0844(552) | 304 | 27.6 | 269 | 1 | -- | K10747 | LIG1 | DNA ligase I, ATP-dependent Dnl1; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > tcq:TIRI35C_2015(559) | 320 | 26.9 | 269 | 0 | -- | K10747 | LIG1 | lig; DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > tpie:A7C91_04645(560) | 475 | 25.9 | 269 | 1 | -- | K10747 | LIG1 | DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > aic:JK629_09020(805) | 343 | 28.6 | 268 | 1 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pys:Py04_1516(559) | 438 | 25.1 | 268 | 0 | -- | K10747 | LIG1 | ATP-dependent DNA ligase; K10747 DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | |
| > sahn:JRG66_00755(807) | 389 | 22.9 | 268 | 3 | -- | ligD; DNA ligase D | |||