GFIT result for T04420

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

rhn:AMJ98_CH00651
(659 a.a.)
 
--
 
K01971  ligD  ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> rhx:AMK02_CH00654(659)65998.84384(2700)0<> K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ret:RHE_CH00617(659)65994.14201(2518)4<> K01971  ligD putative DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rel:REMIM1_CH00627(659)65993.84187(2504)5<> K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpha:AMC79_CH00655(836)64389.43912(2255)0<> K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rec:RHECIAT_CH0000692(835)64289.13883(2203)6<> K01971  ligD probable ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhl:LPU83_2814(837)64472.73175(1535)12<> K01971  ligD ligD; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ata:AWN88_02590(830)66068.53077(1378)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agr:AGROH133_09757(830)66066.12999(1340)3<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atf:Ach5_43430(830)66066.12999(2135)3<> K01971  ligD ligD; DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aak:AA2016_6337(865)64263.42780(1262)0<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pye:A6J80_22380(845)66262.42780(2480)0<> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> meso:BSQ44_02815(861)65461.02754(2515)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pamn:pAMV3p0281(849)64562.02744(2490)0<- K01971  ligD ykoU2; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pht:BLM14_01395(848)64061.62741(2549)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> shz:shn_27290(850)65362.02734(1067)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sfd:USDA257_c16580(850)64461.32722(1136)8-> K01971  ligD ykoU2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sino:SS05631_b61200(850)64460.22720(1045)0-> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> same:SAMCFNEI73_pC0667(850)64760.92719(1061)0-> K01971  ligD ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nao:Y958_30480(852)65560.52708(1361)0-> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngl:RG1141_CH32250(843)65459.32693(2507)1<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhi:NGR_b04710(850)64161.52689(1132)7<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> atu:Atu4632(771)59865.72680(1043)5-> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ngg:RG540_CH33090(842)65259.02678(1911)3<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rtr:RTCIAT899_PC09420(858)65660.12674(1419)3<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rht:NT26_2902(846)65958.12643(1804)0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> neo:CYG48_11850(659)66357.52613(975)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> vgo:GJW-30_1_00121(862)64558.82606(2255)0-> K01971  ligD ykoU; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> paru:CYR75_01430(828)64859.02588(2311)0<> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sno:Snov_0819(842)65759.22585(2381)6<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msc:BN69_1443(852)65158.42580
5<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> azc:AZC_1006(900)65058.52546(2439)8<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bid:Bind_0382(644)61760.62537(1786)2<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mes:Meso_1150(845)63558.42512(1732)3<> K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sphj:BSL82_05400(829)64557.72494(2197)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdi:GDI0169(856)66555.02424(2312)4<> K01971  ligD putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> agc:BSY240_2160(862)67154.42422(2209)0<> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oah:DR92_3927(834)62056.92422(1642)2<> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> oan:Oant_4315(834)62056.92422(2208)1<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gdj:Gdia_2239(856)66554.92420()7<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> geh:HYN69_13965(830)66253.32295(2136)0<> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> moc:BB934_16235(861)65952.42209(180)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> phr:C6569_04930(846)67349.32105(1900)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mop:Mesop_0815(853)68347.72104(668)9<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mln:A9174_03965(829)64849.12096(658)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mlo:mll4606(829)66248.52096(500)11-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rva:Rvan_0633(970)68249.02091(1873)10<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mci:Mesci_0783(837)67047.62080(623)6<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mesw:A9K65_004035(837)67047.62077(623)0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mam:Mesau_00823(846)67647.62068(628)4<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bop:AXW83_17900(850)66449.82030(371)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mamo:A6B35_04445(841)67547.01995(546)0<> K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)67243.31809(644)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rga:RGR602_PC00910(312)31282.11767(126)2-> K01971  ligD ATP-dependent DNA ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)69141.51739(1454)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> daf:Desaf_0308(931)65842.91738(1635)3<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aex:Astex_1372(847)63543.11733(1494)1<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlt:Rleg2_5705(883)65943.61718(235)7-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nmv:NITMOv2_2657(895)64644.41717(1417)3-- K01971  ligD ykoU; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlu:RLEG12_02295(882)69442.41713(214)7-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlb:RLEG3_09760(881)69442.41710(169)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)63442.31707(1602)0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cak:Caul_1769(918)68241.61705(1493)4-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> xau:Xaut_4365(886)66543.21703(1515)5-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> llg:44548918_01913(827)65340.41698(1598)0-- K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rlg:Rleg_5341(881)69241.51693(4)6-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smi:BN406_03940(878)68541.91692(73)13-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smeg:C770_GR4pC0191(878)68642.01691(70)9-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aca:ACP_3506(863)67642.31686(1442)0<> K01971  ligD putative DNA ligase, ATP-dependent; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhv:BA939_19590(883)66942.31685(185)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smer:DU99_19515(878)68441.71683(64)8-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cse:Cseg_3113(883)67041.81681(1452)5-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rir:BN877_p0677(883)66942.21681(170)6-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smx:SM11_pC1486(878)68442.01679(60)15-- K01971  ligD conserved hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rep:IE4803_PC00640(878)68242.81676(195)5-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> lha:LHA_0995(831)61940.91675(1448)1-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> eah:FA04_28305(880)67042.21671(158)0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abas:ACPOL_1798(925)66441.41668(1215)0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rhk:Kim5_PC00578(878)68241.61667(185)0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ead:OV14_b0410(884)69641.21663(798)10<- K01971  ligD putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rei:IE4771_PD00652(878)68442.01661(178)6-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvv:BHK69_13460(879)66941.71654(805)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rle:pRL120229(881)69241.21654(805)5-- K01971  ligD putative DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbu:CBU_1934(815)60742.21647()0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> brk:CWS35_34490(875)65741.91643(1454)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbc:CbuK_0042(815)60742.01642()0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbg:CbuG_0044(815)60742.01642()0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> six:BSY16_4675(879)67741.41641(767)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pfb:VO64_0156(832)64542.31640(1453)1<> K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tsa:AciPR4_1657(957)66739.71639(1454)12<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gma:AciX8_1368(920)68039.71637(1415)2<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbs:COXBURSA331_A2135(815)60742.01636()0<> K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nha:Nham_3907(900)68941.41636(36)9-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> avi:Avi_8017(893)67840.91633(777)4<- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)65740.91626(1372)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mei:Msip34_2574(870)67638.81621()1<> K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> msl:Msil_1736(888)69040.91620(877)4<- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sme:SMc03959(865)68141.31619(198)9-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smel:SM2011_c03959(865)68141.31619(193)9-- K01971  ligD putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smk:Sinme_2798(865)68141.31619(191)5-- K01971  ligD DNA polymerase LigD, polymerase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> smq:SinmeB_2574(865)68141.31619(192)7-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...