GFIT result for
rhq
|
GFIT result for
rhq
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rhq:IM25_17355 (322 a.a.) |
-- |
K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rpy:Y013_03425(322) | 322 | 97.8 | 2137 | 4 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rby:CEJ39_14110(322) | 322 | 96.6 | 2116 | 4 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rrt:4535765_02469(312) | 312 | 98.4 | 2104 | 4 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rcr:NCTC10994_00973(313) | 313 | 69.3 | 1506 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > req:REQ_26630(323) | 323 | 64.7 | 1424 | 5 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > roa:Pd630_LPD04033(313) | 313 | 66.1 | 1385 | 8 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdef:P9209_05125(324) | 321 | 62.6 | 1380 | 3 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rha:RHA1_ro00015(296) | 296 | 66.2 | 1329 | 9 | -- | K01971 | ligD | possible DNA-ligase (ATP), C-terminal; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhod:AOT96_34395(324) | 321 | 57.0 | 1236 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > reb:XU06_30590(324) | 321 | 57.3 | 1210 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nyu:D7D52_23495(?) | 312 | 54.5 | 1142 | 0 | -- | - | |||
| > rrz:CS378_19505(325) | 321 | 55.1 | 1139 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rav:AAT18_03845(325) | 323 | 53.6 | 1126 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ncy:NOCYR_3082(323) | 312 | 53.5 | 1123 | 3 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nie:KV110_20845(315) | 314 | 53.8 | 1116 | 8 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nod:FOH10_10960(314) | 310 | 54.2 | 1093 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noz:DMB37_00695(315) | 312 | 53.8 | 1092 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nbr:O3I_020445(318) | 314 | 52.5 | 1087 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nya:LTV02_14895(321) | 312 | 53.8 | 1079 | 5 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nspu:IFM12276_26510(320) | 314 | 52.5 | 1057 | 0 | -- | hypothetical protein | |||
| > rer:RER_pREL1-01040(279) | 278 | 57.2 | 1056 | 2 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nfa:NFA_29400(320) | 314 | 51.0 | 1053 | 6 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ntc:KHQ06_20635(318) | 310 | 52.3 | 1053 | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhaw:RMN56_26030(?) | 322 | 51.9 | 1037 | 0 | -- | - | |||
| > ngp:LTT66_30105(315) | 308 | 52.6 | 1034 | 6 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acad:UA74_22360(384) | 317 | 51.1 | 1011 | 7 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acti:UA75_22835(384) | 317 | 51.1 | 1011 | 6 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nhu:H0264_19415(314) | 310 | 50.6 | 1001 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mtem:GCE86_11915(309) | 310 | 50.6 | 995 | 10 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ahg:AHOG_20405(333) | 315 | 50.8 | 979 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gor:KTR9_5426(320) | 314 | 48.4 | 978 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actn:L083_1682(393) | 312 | 51.6 | 976 | 18 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nfr:ERS450000_01148(295) | 294 | 50.0 | 975 | 6 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sacc:EYD13_10390(313) | 313 | 49.2 | 963 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccaz:COUCH_26075(410) | 308 | 50.3 | 961 | 16 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfla:Pflav_021830(322) | 311 | 49.8 | 958 | 11 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbro:HOP40_18535(312) | 314 | 50.0 | 951 | 20 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afs:AFR_28570(389) | 317 | 48.6 | 950 | 12 | -- | K01971 | ligD | DNA polymerase LigD ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ncx:Nocox_15540(334) | 310 | 50.0 | 949 | 9 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > now:GBF35_18495(333) | 314 | 49.0 | 949 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhai:OHB01_28760(?) | 313 | 49.8 | 943 | 0 | -- | - | |||
| > pdx:Psed_4989(683) | 326 | 48.8 | 938 | 41 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aja:AJAP_30105(318) | 323 | 48.0 | 936 | 6 | -- | K01971 | ligD | Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aoi:AORI_1870(318) | 323 | 47.7 | 932 | 9 | -- | K01971 | ligD | lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppel:H6H00_08145(322) | 320 | 48.7 | 930 | 22 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aprt:MUY14_17820(324) | 325 | 46.2 | 929 | 13 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ahm:TL08_19410(347) | 322 | 48.8 | 926 | 2 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aroo:NQK81_13585(321) | 323 | 47.1 | 926 | 12 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aou:ACTOB_003949(?) | 307 | 49.8 | 922 | 0 | -- | - | |||
| > nad:NCTC11293_02099(324) | 317 | 48.9 | 919 | 5 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aori:SD37_31835(321) | 323 | 46.4 | 918 | 8 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gob:Gobs_2120(436) | 320 | 48.7 | 917 | 25 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmar:MODMU_2075(489) | 315 | 48.6 | 915 | 14 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tbi:Tbis_2338(321) | 313 | 47.9 | 914 | 3 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amyb:BKN51_01540(318) | 323 | 45.8 | 912 | 5 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noa:BKM31_27980(334) | 324 | 46.6 | 909 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngn:LCN96_18550(334) | 324 | 46.6 | 903 | 10 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > celh:GXP71_12485(499) | 312 | 47.4 | 899 | 6 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > leif:HF024_11835(820) | 320 | 46.9 | 888 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smao:CAG99_02035(330) | 328 | 46.3 | 887 | 24 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gry:D7I44_10885(784) | 319 | 46.4 | 882 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > roz:CBI38_31175(323) | 326 | 46.9 | 882 | 8 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rfs:C1I64_14985(856) | 321 | 47.4 | 880 | 28 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actq:OG417_24730(?) | 312 | 47.8 | 879 | 0 | -- | - | |||
| > actl:L3i22_060250(334) | 317 | 46.4 | 875 | 21 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsd:BLASA_3098(323) | 312 | 48.4 | 875 | 10 | -- | K01971 | ligD | LigD; DNA ligase D/DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > halt:IM660_11265(860) | 317 | 46.1 | 875 | 21 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rko:JWS14_44480(327) | 315 | 47.6 | 874 | 7 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agra:AGRA3207_005930(324) | 314 | 48.1 | 873 | 5 | -- | K01971 | ligD | DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > athm:L1857_29160(333) | 322 | 45.3 | 873 | 11 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > svi:Svir_20210(376) | 317 | 45.1 | 872 | 3 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mflv:NCTC10271_02243(322) | 314 | 44.6 | 869 | 6 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hea:HL652_15460(895) | 318 | 44.7 | 866 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > malv:MALV_56170(314) | 318 | 48.1 | 863 | 4 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rfa:A3L23_05167(309) | 284 | 48.2 | 863 | 3 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhal:LQF10_10875(834) | 314 | 46.5 | 862 | 10 | -- | ATP-dependent DNA ligase | |||
| > sxi:SXIM_51150(317) | 330 | 47.3 | 862 | 16 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > lse:F1C12_01125(818) | 329 | 46.5 | 861 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cati:CS0771_70860(335) | 310 | 46.1 | 860 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msuw:GCM10025863_03820(?) | 320 | 45.6 | 860 | 0 | -- | - | |||
| > plap:EAO79_14770(814) | 325 | 44.9 | 860 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amq:AMETH_5252(333) | 322 | 44.4 | 856 | 9 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rop:ROP_pROB01-05350(331) | 315 | 45.4 | 856 | 4 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > satk:SA2016_3491(884) | 328 | 46.6 | 856 | 29 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acta:C1701_04550(477) | 317 | 46.4 | 855 | 9 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sald:FVA74_07970(826) | 321 | 46.7 | 854 | 0 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > kphy:AOZ06_15230(477) | 321 | 45.2 | 853 | 11 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > celz:E5225_05400(314) | 307 | 46.9 | 852 | 11 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > strc:AA958_07435(334) | 332 | 44.6 | 850 | 9 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > suba:LQ955_03960(859) | 322 | 44.4 | 850 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mkm:Mkms_5930(329) | 317 | 45.1 | 847 | 6 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmc:Mmcs_5528(329) | 317 | 45.1 | 847 | 4 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acao:NF551_00265(868) | 333 | 45.3 | 846 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mnf:JSY13_08590(?) | 331 | 45.6 | 846 | 0 | -- | - | |||
| > msp:Mspyr1_55390(328) | 323 | 47.1 | 845 | 6 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > spiq:OHA34_30840(?) | 314 | 44.6 | 845 | 0 | -- | - | |||
| > mest:PTQ19_10510(?) | 322 | 46.6 | 843 | 0 | -- | - | |||
| > rhs:A3Q41_04980(278) | 269 | 48.7 | 843 | 3 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > shar:HUT13_25850(320) | 317 | 47.3 | 843 | 21 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ako:N9A08_00280(?) | 333 | 44.7 | 841 | 0 | -- | - | |||