GFIT result for
rhv
|
GFIT result for
rhv
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| rhv:BA939_19610 (343 a.a.) |
-- |
K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rpus:CFBP5875_23885(343) | 343 | 98.8 | 2281 | 2 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ata:AWN88_04510(343) | 343 | 98.3 | 2273 | 4 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rir:BN877_p0681(343) | 342 | 98.8 | 2270 | 4 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agt:EYD00_25735(356) | 342 | 98.2 | 2260 | 3 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rbq:J2J99_29345(343) | 343 | 86.3 | 2062 | 8 | <> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > asal:CFBP5507_25825(343) | 343 | 85.4 | 2037 | 4 | <> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > atu:Atu5051(345) | 343 | 85.1 | 2029 | 5 | <> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhr:CKA34_01615(349) | 343 | 79.9 | 1888 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rep:IE4803_CH03783(347) | 343 | 79.0 | 1885 | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sino:SS05631_b52900(345) | 342 | 80.1 | 1882 | 12 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rei:IE4771_CH03739(347) | 343 | 79.0 | 1881 | 6 | -> | ATP-dependent DNA ligase protein | |||
| > same:SAMCFNEI73_pB0492(347) | 342 | 79.2 | 1878 | 8 | -> | K01971 | ligD | ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > skm:PZL22_005364(346) | 342 | 79.5 | 1861 | 10 | -> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > shz:shn_31120(351) | 341 | 79.2 | 1856 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sme:SMa0424(346) | 342 | 79.2 | 1856 | 9 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smel:SM2011_a0424(346) | 342 | 79.2 | 1856 | 9 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > six:BSY16_4677(352) | 342 | 77.5 | 1855 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smer:DU99_19535(342) | 342 | 78.7 | 1816 | 7 | -> | ATP-dependent DNA ligase | |||
| > eah:FA04_28315(352) | 341 | 76.0 | 1803 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > raw:NE851_02435(348) | 342 | 76.3 | 1771 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlt:Rleg2_5730(350) | 341 | 73.9 | 1751 | 4 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rad:CO657_29310(350) | 341 | 73.0 | 1743 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rel:REMIM1_PD00264(354) | 342 | 72.5 | 1742 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rle:pRL120212(348) | 345 | 75.4 | 1742 | 4 | -- | K01971 | ligD | putative DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ret:RHE_PE00251(354) | 342 | 72.5 | 1740 | 4 | -> | K01971 | ligD | putative DNA ligase (ATP) protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rln:J0663_27745(353) | 342 | 72.2 | 1740 | 3 | -> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlb:RLEG3_09680(347) | 342 | 75.1 | 1738 | 6 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlw:RlegWSM1455_24555(347) | 342 | 74.6 | 1732 | 3 | -> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > npm:QEO92_31945(350) | 342 | 73.4 | 1731 | 3 | -> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rga:RGR602_PC00619(348) | 342 | 74.0 | 1728 | 6 | -> | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rtr:RTCIAT899_PB00395(354) | 342 | 71.6 | 1725 | 2 | -- | K01971 | ligD | putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rbw:RLCC275e_24305(?) | 345 | 73.9 | 1717 | 0 | -- | - | |||
| > rrg:J3P73_25025(352) | 342 | 73.7 | 1715 | 3 | -> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smx:SM11_pC1481(314) | 315 | 79.4 | 1714 | 13 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rec:RHECIAT_PA0000196(354) | 342 | 71.1 | 1711 | 4 | -> | K01971 | ligD | putative ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhid:FFM81_029515(350) | 341 | 71.8 | 1711 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhx:AMK02_PE00261(354) | 337 | 72.4 | 1711 | 5 | -> | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlg:Rleg_5331(346) | 342 | 74.6 | 1710 | 5 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rii:FFM53_025695(348) | 341 | 73.3 | 1708 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpha:AMC79_PB00198(355) | 342 | 71.1 | 1702 | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rban:J2J98_24995(350) | 344 | 70.1 | 1700 | 3 | -> | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlu:RLEG12_02405(342) | 336 | 72.3 | 1693 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rtu:PR017_17865(348) | 341 | 70.4 | 1670 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > avv:RvVAT039_pl08210(348) | 341 | 70.4 | 1662 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ead:OV14_c0035(348) | 341 | 70.4 | 1661 | 6 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rsul:N2599_13885(347) | 347 | 66.9 | 1611 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > vg:22109413(348) | 348 | 68.1 | 1600 | 103 | -- | K01971 | ligD | PPF1_42; Rhizobium phage vB_RleM_PPF1; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rez:AMJ99_PC00262(316) | 308 | 73.7 | 1584 | 5 | -> | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhn:AMJ98_PD00261(316) | 308 | 73.7 | 1584 | 6 | -> | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > neo:CYG48_19465(345) | 343 | 65.9 | 1582 | 4 | -> | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > avf:RvVAR031_pl06110(309) | 307 | 74.3 | 1573 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhl:LPU83_1547(346) | 344 | 64.5 | 1558 | 11 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smi:BN406_03945(290) | 285 | 80.4 | 1554 | 12 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > roy:G3A56_28140(346) | 346 | 67.1 | 1535 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rct:PYR68_00825(?) | 345 | 62.9 | 1468 | 0 | -- | - | |||
| > soj:K6301_24340(350) | 350 | 61.4 | 1447 | 3 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhk:Kim5_CH01181(351) | 344 | 61.6 | 1442 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rht:NT26_p10049(351) | 342 | 62.0 | 1442 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rgr:FZ934_08420(347) | 345 | 61.4 | 1441 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > auz:Sa4125_19480(351) | 338 | 63.9 | 1434 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > atf:Ach5_49040(350) | 351 | 62.4 | 1424 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ecaa:J3R84_30805(?) | 355 | 61.4 | 1411 | 0 | -- | - | |||
| > agr:AGROH133_14625(350) | 350 | 61.1 | 1410 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rfv:RFYW14_00661(348) | 341 | 61.3 | 1394 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > alf:CFBP5473_21565(350) | 351 | 60.1 | 1379 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bvv:BHK69_02820(346) | 330 | 63.6 | 1377 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aub:LXB15_07060(334) | 330 | 60.9 | 1374 | 4 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > boi:BLM15_28995(347) | 343 | 58.6 | 1354 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bves:QO058_14070(?) | 330 | 59.4 | 1327 | 0 | -- | - | |||
| > star:G3545_13975(325) | 310 | 63.2 | 1321 | 2 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bof:FQV39_30420(346) | 327 | 60.6 | 1309 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bop:AXW83_24590(346) | 328 | 58.8 | 1277 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aleg:CFBP4996_26190(?) | 319 | 57.4 | 1246 | 0 | -- | - | |||
| > enu:PYH37_000520(328) | 327 | 56.0 | 1243 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > oah:DR92_4447(312) | 308 | 59.1 | 1226 | 2 | -- | ligD; DNA ligase D | |||
| > eak:EKH55_0369(327) | 311 | 55.6 | 1205 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sfd:USDA257_c29030(324) | 311 | 55.6 | 1200 | 9 | -- | K01971 | ligD | putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sfh:SFHH103_01641(327) | 314 | 55.7 | 1191 | 6 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smd:Smed_1305(343) | 331 | 54.1 | 1176 | 6 | -- | K01971 | ligD | DNA polymerase LigD ligase region; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smq:SinmeB_1662(336) | 327 | 54.1 | 1171 | 8 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > enp:JVX98_12710(?) | 304 | 53.6 | 1152 | 0 | -- | - | |||
| > smeg:C770_GR4pC0194(205) | 200 | 77.0 | 1039 | 7 | -- | K01971 | ligD | ATP dependent DNA ligase C terminal region/ATP dependent DNA ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngg:RG540_CH06180(298) | 294 | 52.7 | 1025 | 3 | -- | DNA polymerase LigD-like ligase domain-containing protein | |||
| > chea:PVE73_27730(?) | 252 | 59.1 | 943 | 0 | -- | - | |||
| > tso:IZ6_27950(817) | 314 | 45.5 | 908 | 1 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bbar:RHAL1_00288(335) | 335 | 43.3 | 902 | 2 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msl:Msil_3103(336) | 337 | 44.2 | 893 | 2 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mico:GDR74_07785(846) | 333 | 42.6 | 876 | 5 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pmeh:JWJ88_05730(846) | 345 | 42.9 | 867 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rlac:QMO75_05810(?) | 314 | 45.2 | 860 | 0 | -- | - | |||
| > palp:JHW40_03240(821) | 330 | 43.3 | 858 | 4 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmei:LRP31_34910(?) | 311 | 43.4 | 852 | 0 | -- | - | |||
| > moc:BB934_16235(861) | 309 | 45.3 | 852 | 5 | -> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hdt:HYPDE_32333(356) | 332 | 41.6 | 850 | 1 | -> | K01971 | ligD | DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rva:Rvan_0633(970) | 304 | 45.7 | 850 | 10 | -> | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > paak:FIU66_17355(835) | 349 | 42.4 | 846 | 7 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > meso:BSQ44_02815(861) | 353 | 41.4 | 843 | 5 | -> | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ssum:Q9314_20970(?) | 336 | 43.5 | 843 | 0 | -- | - | |||
| > rhi:NGR_b04710(850) | 316 | 43.0 | 842 | 7 | -> | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bpsn:NIK97_01575(837) | 332 | 43.1 | 840 | 1 | -> | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |