GFIT result for
roa
|
GFIT result for
roa
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| roa:Pd630_LPD04033 (313 a.a.) |
-- |
K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > rha:RHA1_ro00015(296) | 296 | 90.9 | 1832 | 9 | <> | K01971 | ligD | possible DNA-ligase (ATP), C-terminal; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rcr:NCTC10994_00091(313) | 313 | 74.4 | 1654 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > req:REQ_26630(323) | 313 | 75.1 | 1638 | 5 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdef:P9209_05125(324) | 313 | 71.9 | 1532 | 3 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rrt:4535765_02469(312) | 313 | 66.8 | 1401 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhq:IM25_17355(322) | 313 | 66.1 | 1385 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rpy:Y013_03425(322) | 313 | 65.5 | 1366 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rby:CEJ39_14110(322) | 313 | 64.9 | 1361 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhod:AOT96_34395(324) | 313 | 62.6 | 1332 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > reb:XU06_30590(324) | 313 | 60.1 | 1252 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rrz:CS378_19505(325) | 311 | 58.2 | 1226 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ncy:NOCYR_3082(323) | 310 | 58.1 | 1220 | 3 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rav:AAT18_03845(325) | 311 | 56.3 | 1200 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nyu:D7D52_23495(?) | 313 | 55.9 | 1141 | 0 | -- | - | |||
| > nie:KV110_20845(315) | 314 | 52.5 | 1128 | 8 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rer:RER_pREL1-01040(279) | 278 | 58.3 | 1113 | 2 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhaw:RMN56_26030(?) | 310 | 54.8 | 1097 | 0 | -- | - | |||
| > noz:DMB37_00695(315) | 312 | 51.6 | 1096 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nbr:O3I_020445(318) | 312 | 52.2 | 1095 | 3 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nod:FOH10_10960(314) | 310 | 54.5 | 1093 | 6 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ntc:KHQ06_20635(318) | 311 | 54.0 | 1093 | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nspu:IFM12276_26510(320) | 313 | 54.6 | 1090 | 0 | -- | hypothetical protein | |||
| > nya:LTV02_14895(321) | 311 | 53.1 | 1080 | 5 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mtem:GCE86_11915(309) | 310 | 53.9 | 1071 | 10 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nfa:NFA_29400(320) | 312 | 51.3 | 1059 | 6 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngp:LTT66_30105(315) | 308 | 53.2 | 1051 | 6 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sacc:EYD13_10390(313) | 312 | 51.9 | 1050 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nhu:H0264_19415(314) | 311 | 50.5 | 1042 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ahg:AHOG_20405(333) | 315 | 53.7 | 1031 | 3 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gor:KTR9_5426(320) | 312 | 52.9 | 1029 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acad:UA74_22360(384) | 314 | 52.9 | 1026 | 7 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acti:UA75_22835(384) | 314 | 52.9 | 1026 | 6 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pfla:Pflav_021830(322) | 309 | 52.8 | 1020 | 11 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actn:L083_1682(393) | 307 | 52.4 | 1013 | 18 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pbro:HOP40_18535(312) | 314 | 50.3 | 1008 | 20 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nfr:ERS450000_01148(295) | 294 | 50.7 | 999 | 6 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aou:ACTOB_003949(?) | 304 | 53.3 | 998 | 0 | -- | - | |||
| > ncx:Nocox_15540(334) | 312 | 51.9 | 988 | 9 | -- | K01971 | ligD | Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ccaz:COUCH_26075(410) | 309 | 51.8 | 985 | 16 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > afs:AFR_28570(389) | 310 | 51.6 | 978 | 12 | -- | K01971 | ligD | DNA polymerase LigD ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ahm:TL08_19410(347) | 317 | 51.4 | 977 | 2 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nad:NCTC11293_02099(324) | 317 | 50.5 | 975 | 5 | -- | K01971 | ligD | Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mhai:OHB01_28760(?) | 311 | 51.8 | 973 | 0 | -- | - | |||
| > roz:CBI38_31175(323) | 321 | 49.2 | 970 | 8 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rfa:A3L23_05167(309) | 305 | 50.5 | 969 | 3 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > pdx:Psed_4989(683) | 315 | 49.8 | 963 | 41 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actw:F7P10_31570(324) | 314 | 50.6 | 959 | 14 | -- | K01971 | ligD | DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cati:CS0771_70860(335) | 314 | 50.0 | 945 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > now:GBF35_18495(333) | 312 | 50.3 | 944 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > celh:GXP71_12485(499) | 311 | 49.8 | 943 | 6 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ngn:LCN96_18550(334) | 322 | 48.8 | 943 | 10 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > ppel:H6H00_08145(322) | 319 | 49.8 | 943 | 22 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > gob:Gobs_2120(436) | 313 | 48.2 | 937 | 25 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > agra:AGRA3207_005930(324) | 314 | 49.4 | 936 | 5 | -- | K01971 | ligD | DNA polymerase LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aoi:AORI_1870(318) | 314 | 49.0 | 936 | 9 | -- | K01971 | ligD | lig; DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > spiq:OHA34_30840(?) | 313 | 48.2 | 936 | 0 | -- | - | |||
| > strc:AA958_07435(334) | 322 | 48.1 | 936 | 9 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > noa:BKM31_27980(334) | 321 | 47.7 | 935 | 6 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aja:AJAP_30105(318) | 314 | 48.7 | 934 | 6 | -- | K01971 | ligD | Hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmar:MODMU_2075(489) | 314 | 50.0 | 931 | 14 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rhs:A3Q41_04980(278) | 275 | 51.6 | 929 | 3 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aroo:NQK81_13585(321) | 314 | 48.1 | 928 | 12 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rko:JWS14_44480(327) | 317 | 49.8 | 928 | 7 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > svi:Svir_20210(376) | 312 | 47.1 | 927 | 3 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tbi:Tbis_2338(321) | 311 | 49.5 | 922 | 3 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actl:L3i22_060250(334) | 313 | 47.0 | 919 | 21 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amaz:LUW76_36950(324) | 316 | 49.4 | 918 | 9 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amyb:BKN51_01540(318) | 314 | 47.1 | 918 | 5 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > amq:AMETH_5252(333) | 312 | 46.8 | 914 | 9 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mkm:Mkms_5930(329) | 314 | 49.0 | 914 | 6 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mmc:Mmcs_5528(329) | 314 | 49.0 | 914 | 4 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > rop:ROP_pROB01-05350(331) | 315 | 48.3 | 914 | 4 | -- | K01971 | ligD | putative ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > athm:L1857_29160(333) | 312 | 46.8 | 913 | 11 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cfi:Celf_0800(491) | 311 | 48.9 | 913 | 13 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > smao:CAG99_02035(330) | 319 | 47.6 | 912 | 24 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nsr:NS506_05464(316) | 314 | 50.0 | 907 | 6 | -- | K01971 | ligD | DNA ligase (ATP); K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > jtl:M6D93_05340(501) | 315 | 48.3 | 906 | 2 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aori:SD37_31835(321) | 314 | 47.5 | 902 | 8 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > aprt:MUY14_17820(324) | 318 | 47.5 | 898 | 13 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > celz:E5225_05400(314) | 312 | 48.1 | 897 | 11 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > actq:OG417_24730(?) | 295 | 49.5 | 894 | 0 | -- | - | |||
| > bsd:BLASA_3098(323) | 312 | 48.1 | 891 | 10 | -- | K01971 | ligD | LigD; DNA ligase D/DNA polymerase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > acta:C1701_04550(477) | 314 | 48.1 | 880 | 9 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > madi:A7U43_28175(?) | 315 | 48.9 | 878 | 0 | -- | - | |||
| > rpsk:JWS13_04200(328) | 318 | 46.9 | 876 | 5 | -- | K01971 | ligD | DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mflv:NCTC10271_02243(322) | 313 | 46.6 | 875 | 6 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > heh:L3i23_09020(858) | 319 | 48.0 | 874 | 8 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nah:F5544_19045(314) | 314 | 48.4 | 873 | 3 | -- | K01971 | ligD | hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > cai:Caci_5248(495) | 317 | 47.0 | 871 | 9 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > tcu:Tcur_1208(316) | 319 | 47.6 | 871 | 2 | -- | K01971 | ligD | DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > blap:MVA48_01915(495) | 317 | 46.4 | 868 | 7 | -- | K01971 | ligD | ligD; non-homologous end-joining DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msa:Mycsm_06981(341) | 319 | 48.3 | 868 | 5 | -- | K01971 | ligD | ATP dependent DNA ligase-like protein,ATP dependent DNA ligase family protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > bsol:FSW04_15890(798) | 307 | 48.9 | 867 | 11 | -- | K01971 | ligD | ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > sxi:SXIM_51150(317) | 317 | 47.0 | 867 | 16 | -- | K01971 | ligD | DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > mgau:MGALJ_60070(335) | 310 | 46.1 | 866 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > msp:Mspyr1_55390(328) | 315 | 48.9 | 865 | 6 | -- | K01971 | ligD | DNA polymerase LigD-like ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > nwl:NWFMUON74_35130(313) | 315 | 49.8 | 865 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > leif:HF024_11835(820) | 318 | 46.9 | 862 | 5 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > alo:CRK60828(484) | 318 | 48.4 | 861 | 4 | -- | K01971 | ligD | ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |
| > hea:HL652_15460(895) | 319 | 46.1 | 860 | 7 | -- | K01971 | ligD | ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1] | |