GFIT result for

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

saln:SALB1_1757
(336 a.a.)
 
--
 
K01971  ligD  ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> amyc:CU254_25885(314)30954.41177(667)0<>    ATP-dependent DNA ligase
> mmal:CKJ54_13680(332)31255.81148(514)0->    ATP-dependent DNA ligase
> mia:OCU_29800(332)31256.11143(501)3->    DNA polymerase LigD ligase subunit
> mchi:AN480_15575(332)31255.41134(492)0->    ATP-dependent DNA ligase
> mie:LG41_14150(332)31255.41134(492)4->    ATP-dependent DNA ligase
> mir:OCQ_30550(332)31255.41134(492)3->    DNA polymerase LigD ligase subunit
> mit:OCO_29890(332)31255.41134(492)3->    DNA polymerase LigD ligase subunit
> mmm:W7S_14830(332)31255.41134(492)3->    DNA polymerase LigD ligase subunit
> myo:OEM_29110(332)31255.41134(492)3->    DNA polymerase LigD ligase subunit
> amd:AMED_5204(314)30953.11128(634)6->    lig; ATP-dependent DNA ligase
> amm:AMES_5142(314)30953.11128(634)6->    lig; ATP-dependent DNA ligase
> amn:RAM_26510(314)30953.11128(634)6->    ATP-dependent DNA ligase
> amz:B737_5142(314)30953.11128(634)6->    lig; ATP-dependent DNA ligase
> sen:SACE_5682(333)30754.71120(624)7--    DNA ligase, ATP-dependent
> tee:Tel_12770(335)31552.71103
0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mao:MAP4_2518(332)31852.81086(471)3--    ATP-dependent DNA ligase
> mavi:RC58_12520(332)31852.81086(471)3--    ATP-dependent DNA ligase
> mavu:RE97_12540(332)31852.81086(471)3--    ATP-dependent DNA ligase
> mpa:MAP_1329c(354)31852.81086(471)0--    hypothetical protein
> mav:MAV_3148(332)31852.81085(472)3--    ligD; DNA polymerase LigD, ligase domain
> mava:LA64_14300(332)31852.81085(481)2--    ATP-dependent DNA ligase
> mavd:NF84_14150(332)31852.81085(481)2--    ATP-dependent DNA ligase
> mavr:LA63_14305(332)31852.81085(481)3--    ATP-dependent DNA ligase
> scy:SCATT_54560(327)31351.11081(749)4--    DNA polymerase LigD ligase subunit
> sct:SCAT_5457(313)31251.31077(745)3--    ligD; DNA polymerase LigD, ligase domain
> pmad:BAY61_01235(306)30551.81073(450)0<>    ATP-dependent DNA ligase
> ngv:CDO52_22145(317)31249.41059(780)0<>    ATP-dependent DNA ligase
> spun:BFF78_39610(336)31252.61058(471)0<- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bbt:BBta_7782(351)31750.21051(463)3->    putative ATP-dependent DNA ligase
> svl:Strvi_5345(337)30852.91049(689)8--    DNA polymerase LigD, ligase domain protein
> sals:SLNWT_5554(334)31250.61033(702)5<- K01971  ligD DNA polymerase LigD, ligase domain-containing protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rci:RCIX1968(353)32051.91023(760)3->    predicted ATP-dependent DNA ligase
> bsau:DWV08_07400(334)31650.31016
0<> K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> mpd:MCP_2126(334)31848.71014(758)1<>    putative ATP-dependent DNA ligase
> blin:BLSMQ_1369(316)31950.2989(441)0->    ATP-dependent DNA ligase
> lok:Loa_02405(334)33645.2981(299)1<-    DNA polymerase LigD, ligase domain protein
> grs:C7S20_03830(333)31944.8978(333)0<>    ATP-dependent DNA ligase
> hbe:BEI_0347(334)31948.9966
0<> K01971  ligD ligD2; ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> nja:NSJP_1173(864)35044.9885(542)0-- K01971  ligD ligD; Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase]; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rmn:TK49_07020(873)33044.8867(635)1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ank:AnaeK_0832(684)33044.8864(488)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpb:BABL1_gene_166(342)32042.5862(587)0<>    ATP-dependent DNA ligase
> rpf:Rpic12D_0488(867)32845.1855
0-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> acp:A2cp1_0836(683)33043.6836(464)136-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ade:Adeh_0784(658)32244.7836(462)105-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hse:Hsero_2271(856)32642.9833(603)1-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hsz:ACP92_11350(856)32642.9833(603)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rpi:Rpic_0501(863)32844.5833
2-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsl:RPSI07_2772(872)33544.2833
5-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hrb:Hrubri_2562(861)33241.6829
0-- K01971  ligD ATP-dependent DNA ligase protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> rsc:RCFBP_20893(870)32943.2811
15-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scu:SCE1572_21330(687)32441.4811(506)47-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ajs:Ajs_2523(837)32642.3805(584)10-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ccro:CMC5_051300(404)34342.6800(619)7-- K01971  ligD ligD; DNA polymerase LigD, ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> gba:J421_4951(349)32543.1799(67)15-- K01971  ligD DNA polymerase LigD, ligase domain protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> dpy:BA022_07305(837)32641.7792(568)0-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> aba:Acid345_0779(608)32840.9790(424)4-- K01971  ligD ATP dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> blat:WK25_16550(957)33642.3789
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> scl:sce3523(762)32442.6789(452)82-- K01971  ligD unnamed protein product; High confidence in function and specificity; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcew:DM40_5175(957)33642.3788
16-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcen:DM39_7047(888)33743.0786
4-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bpsl:WS57_15615(888)33743.0786(685)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> amq:AMETH_0282(237)22750.2784(116)5--    lig; DNA ligase, ATP-dependent
> bmul:NP80_5544(926)33741.5784
13-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> ppv:NJ69_06730(825)31743.2784(563)1-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> sva:SVA_1768(815)33244.0782(507)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> fpsz:AMR72_01115(881)32339.6781(163)0-- K01971  ligD hypothetical protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> masy:DPH57_08685(885)34741.2781(548)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcm:Bcenmc03_6073(927)33642.6780
6-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axo:NH44784_059851(870)32443.5779(515)23-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> abac:LuPra_01460(663)33841.4778(76)0-- K01971  ligD ykoU_2; putative ATP-dependent DNA ligase YkoU; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcai:K788_0007984(961)32542.2778(322)0-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pspw:BJG93_05705(942)33042.4778(113)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hco:LOKO_00656(851)32044.1777
0-- K01971  ligD Putative DNA ligase-like protein; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> simp:C6571_07475(862)31742.6777(569)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axn:AX27061_4222(874)32443.5776(506)35-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axx:ERS451415_04244(874)32443.5776(506)0-- K01971  ligD Putative DNA ligase-like protein Rv0938/MT0965; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bac:BamMC406_6340(949)33642.3774
6-- K01971  ligD DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> hht:F506_12900(852)32540.9774(511)2-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> tbd:Tbd_2247(846)32144.9774(570)2-- K01971  ligD DNA ligase, ATP-dependent, putative; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> axs:LH59_19425(868)32343.0773(500)19-- K01971  ligD ligD; ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bdf:WI26_27455(921)33642.0773(667)0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> asw:CVS48_18805(867)31744.2772(521)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bvi:Bcep1808_5735(993)33641.7772(184)28-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bam:Bamb_5610(932)33642.0771
6-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bced:DM42_7098(948)33642.0770
8-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bceo:I35_7581(928)33642.0770(669)7-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bstg:WT74_19350(962)33442.5770
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> pol:Bpro_3003(882)32042.8768(608)2-- K01971  ligD ATP-dependent DNA ligase LigD polymerase module / ATP-dependent DNA ligase LigD phosphoesterase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bch:Bcen2424_6483(936)33642.0767(94)6-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bcn:Bcen_1346(936)33642.0767
4-- K01971  ligD ATP-dependent DNA ligase LigD phosphoesterase module / ATP-dependent DNA ligase LigD polymerase module; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bve:AK36_5227(995)33641.7767
43-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> buk:MYA_5305(997)33641.4766
25-- K01971  ligD ATP-dependent DNA ligase clustered with Ku protein, LigD; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bdl:AK34_5177(914)34041.5764
8-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbc:CbuK_0042(815)32539.4763
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbg:CbuG_0044(815)32539.4763
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> bmec:WJ16_17055(911)33642.6762
0-- K01971  ligD DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbs:COXBURSA331_A2135(815)32539.1762
0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> cbu:CBU_1934(815)32539.1762
0-- K01971  ligD ATP-dependent DNA ligase; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
> masz:C9I28_12940(880)32741.3762(526)0-- K01971  ligD ligD; DNA ligase D; K01971 bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
... ... ...