GFIT result for
sli
|
GFIT result for
sli
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| sli:Slin_3339 (172 a.a.) |
-- |
K03088 | rpoE | ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > srd:SD10_07035(172) | 172 | 84.9 | 975 | 8 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spik:EXU85_18040(172) | 172 | 77.9 | 910 | 15 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sfol:H3H32_09550(?) | 172 | 76.7 | 903 | 0 | -- | - | |||
| > spib:G8759_18090(172) | 172 | 77.3 | 899 | 16 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > soq:LQ777_13610(172) | 172 | 76.2 | 888 | 11 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > fib:A6C57_21260(172) | 172 | 75.0 | 869 | 17 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dpf:ON006_14660(?) | 172 | 70.9 | 843 | 0 | -- | - | |||
| > dfq:NFI81_02065(172) | 172 | 70.3 | 839 | 12 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > fae:FAES_4716(182) | 172 | 72.7 | 837 | 17 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > dcn:MUK70_02740(172) | 172 | 70.9 | 834 | 14 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > dyc:NFI80_09665(172) | 172 | 70.3 | 828 | 10 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > dsn:HWI92_09530(172) | 172 | 67.4 | 799 | 10 | -> | RNA polymerase sigma factor | |||
| > rup:DTQ70_22835(172) | 172 | 62.8 | 741 | 7 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > emz:MB380_19115(?) | 171 | 57.3 | 668 | 0 | -- | - | |||
| > rhoz:GXP67_19060(170) | 169 | 55.0 | 621 | 14 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > add:HUW48_19080(170) | 171 | 53.2 | 616 | 10 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aswu:HUW51_14555(170) | 171 | 53.2 | 607 | 13 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tpel:P0M28_28020(?) | 169 | 53.3 | 597 | 0 | -- | - | |||
| > rti:DC20_09210(169) | 168 | 51.2 | 590 | 7 | -- | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > nib:GU926_10880(169) | 168 | 53.0 | 586 | 10 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rud:TH61_05035(169) | 168 | 51.8 | 582 | 5 | -> | K03088 | rpoE | RNA polymerase subunit sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > rsr:T7867_11945(?) | 169 | 51.5 | 548 | 0 | -- | - | |||
| > fbt:D770_13750(176) | 169 | 45.6 | 509 | 7 | -> | ECF subfamily RNA polymerase sigma-24 subunit | |||
| > dori:FH5T_16470(181) | 161 | 45.3 | 481 | 12 | -- | RNA polymerase sigma70 factor | |||
| > maqi:LDL77_00285(169) | 166 | 44.6 | 479 | 10 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ten:LPB136_03395(169) | 163 | 44.2 | 477 | 1 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mrs:Murru_0053(169) | 166 | 44.0 | 475 | 6 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mut:GVT53_09130(169) | 166 | 44.0 | 474 | 8 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kos:KORDIASMS9_04005(169) | 163 | 42.9 | 472 | 5 | -- | K03088 | rpoE | sigH; ECF RNA polymerase sigma factor SigH; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tov:PG911_07830(169) | 168 | 41.1 | 471 | 4 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ccm:Ccan_05890(167) | 166 | 44.6 | 470 | 3 | -> | K03088 | rpoE | Probable RNA polymerase sigma factor rfaY; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sinh:LS482_15900(169) | 166 | 44.0 | 467 | 14 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > flb:LV704_16155(169) | 166 | 42.2 | 464 | 3 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > alut:O5O44_05860(169) | 164 | 42.7 | 463 | 0 | -> | RNA polymerase sigma factor | |||
| > mcos:GM418_18525(196) | 161 | 42.9 | 463 | 59 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pjo:LK449_16555(172) | 169 | 42.0 | 463 | 14 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > trt:PG912_07445(169) | 168 | 41.1 | 462 | 6 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marb:CJ263_17730(170) | 172 | 40.1 | 460 | 6 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mlio:NYZ99_10915(170) | 167 | 41.3 | 460 | 2 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > asag:FGM00_09495(169) | 168 | 39.9 | 459 | 5 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > anf:AQPE_1080(?) | 163 | 41.7 | 458 | 0 | -- | - | |||
| > flg:LV716_14860(169) | 166 | 41.6 | 457 | 7 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > kan:IMCC3317_00690(169) | 163 | 42.3 | 457 | 5 | -> | K03088 | rpoE | sigW_1; ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pmer:INE87_02634(172) | 171 | 42.1 | 457 | 20 | -- | K03088 | rpoE | sigV; RNA polymerase sigma factor SigV; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppon:MUN68_011070(?) | 163 | 41.7 | 457 | 0 | -- | - | |||
| > tmar:MARIT_1740(169) | 163 | 41.1 | 457 | 0 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fcb:LOS89_04415(171) | 168 | 44.6 | 456 | 3 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > phg:KCTC32516_02065(?) | 168 | 41.1 | 456 | 0 | -- | - | |||
| > pob:LPB03_02065(169) | 168 | 41.1 | 456 | 6 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > spon:HME9304_00060(169) | 166 | 41.0 | 456 | 5 | -- | K03088 | rpoE | hypothetical protein; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cagg:HYG79_00650(169) | 171 | 39.8 | 455 | 5 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > drc:G0Q07_08405(181) | 161 | 42.2 | 455 | 18 | -> | sigma-70 family RNA polymerase sigma factor | |||
| > emar:D1013_10765(169) | 166 | 41.6 | 455 | 4 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tje:TJEJU_2341(169) | 168 | 39.9 | 455 | 5 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sabu:MBM09_13160(169) | 163 | 41.1 | 454 | 4 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tpac:PG913_07540(169) | 169 | 40.8 | 453 | 1 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > marf:CJ739_341(169) | 170 | 40.0 | 452 | 13 | -> | K03088 | rpoE | ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > psyn:E9099_12780(169) | 163 | 39.3 | 452 | 4 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > mart:BTR34_00290(169) | 161 | 41.0 | 451 | 1 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > plit:K8354_06015(169) | 168 | 40.5 | 451 | 5 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > bhl:Bache_2880(172) | 166 | 41.6 | 450 | 6 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > bsal:K6V25_11790(173) | 171 | 42.1 | 450 | 8 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > oll:CW732_16240(169) | 163 | 39.3 | 450 | 5 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > seon:BWZ22_11225(169) | 164 | 42.1 | 450 | 5 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fek:C1H87_19845(169) | 165 | 41.2 | 449 | 26 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lut:Lupro_01925(169) | 163 | 41.1 | 449 | 2 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > parc:CI960_21140(170) | 167 | 39.5 | 449 | 22 | -- | RNA polymerase sigma factor | |||
| > pdi:BDI_2994(170) | 167 | 39.5 | 449 | 19 | -- | putative RNA polymerase ECF-type sigma factor | |||
| > phal:H9I45_02470(169) | 168 | 39.9 | 449 | 6 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppn:Palpr_1804(166) | 164 | 41.5 | 449 | 4 | -> | RNA polymerase, sigma-24 subunit, ECF subfamily | |||
| > cao:Celal_0059(169) | 166 | 40.4 | 448 | 3 | -- | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbq:D1817_07315(?) | 164 | 41.5 | 448 | 0 | -- | - | |||
| > mlt:VC82_55(169) | 166 | 40.4 | 448 | 4 | -> | K03088 | rpoE | RNA polymerase, sigma-24 subunit, ECF subfamily; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pbat:JL193_01270(169) | 168 | 39.3 | 448 | 11 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > ppec:H9W90_04600(169) | 168 | 39.3 | 448 | 5 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tmp:F9Y86_14920(169) | 169 | 40.8 | 448 | 1 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > zla:Q5W13_16985(?) | 166 | 41.6 | 448 | 0 | -- | - | |||
| > pun:NQP51_02495(169) | 168 | 39.9 | 447 | 2 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > tsig:D6T69_09220(?) | 169 | 40.8 | 447 | 0 | -- | - | |||
| > ttg:P8625_04075(?) | 169 | 40.8 | 447 | 0 | -- | - | |||
| > fbi:L0669_00530(169) | 170 | 41.2 | 446 | 8 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fcc:LOS86_09735(171) | 168 | 44.0 | 446 | 3 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > prn:BW723_13785(169) | 168 | 39.9 | 446 | 5 | -- | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > hws:RNZ46_03160(?) | 163 | 39.3 | 445 | 0 | -- | - | |||
| > mare:EJ994_03465(169) | 166 | 39.2 | 445 | 4 | -> | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > oaq:DZC78_04975(169) | 163 | 38.7 | 445 | 3 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pcea:J3359_02380(169) | 168 | 39.3 | 445 | 9 | -- | K03088 | rpoE | sigma-70 family RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > sze:AW14_07505(169) | 165 | 40.6 | 445 | 2 | -> | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > win:WPG_2609(169) | 163 | 41.1 | 445 | 5 | -> | K03088 | rpoE | RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fse:DI487_02390(171) | 170 | 42.9 | 444 | 2 | -> | K03088 | rpoE | RNA polymerase subunit sigma-70; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pfai:NXY11_21350(170) | 169 | 40.2 | 444 | 35 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > pom:MED152_02895(169) | 168 | 39.9 | 444 | 2 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > aalg:AREALGSMS7_04735(169) | 163 | 38.0 | 443 | 8 | -> | K03088 | rpoE | ECF RNA polymerase sigma factor SigW; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cbat:M666_18055(169) | 166 | 39.2 | 443 | 5 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > fbm:MQE35_02695(169) | 168 | 39.3 | 443 | 5 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > lpal:LDL79_00535(169) | 170 | 41.2 | 443 | 4 | -> | RNA polymerase sigma factor | |||
| > rbi:RB2501_00191(170) | 169 | 40.8 | 443 | 6 | -> | K03088 | rpoE | putative extracytoplasmic function alternative sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > cbal:M667_18050(169) | 166 | 39.2 | 442 | 4 | -- | K03088 | rpoE | RNA polymerase sigma-70 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > chrw:KA713_21120(170) | 169 | 37.3 | 442 | 13 | -- | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |
| > gaa:HX109_12085(170) | 165 | 40.6 | 442 | 5 | -> | K03088 | rpoE | RNA polymerase sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily | |