GFIT result for T00555

[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster]

smd:Smed_6143
(548 a.a.)
 
--
 
K03205  virD4  type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
DBHit(Length)Over-
lap
Ident.
(%)
ScoremarginPara-
log
Cont.KOOrthCurrent Annotation
> smq:SinmeB_5971(563)54898.53542(3307)1<- K03205  virD4 TRAG family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rlu:RLEG12_00475(564)54283.03014(2727)2-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> ret:RHE_PA00070(666)54281.52961(2515)3-- K03205  virD4 virD4; transport secretion system IV, VirD4 protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> mln:A9174_30895(563)54081.72955(2289)2<- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> atf:Ach5_52730(656)54280.62954(2663)2-- K03205  virD4 virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> nen:NCHU2750_57200(668)54280.62948(2333)6-- K03205  virD4 virD4; type IV secretion system protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> atu:Atu6184(668)54280.42944(2352)2-- K03205  virD4  [sp:VIRD4_AGRFC] virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> mam:Mesau_05658(581)54580.72942(2275)2<- K03205  virD4 type IV secretory pathway, VirD4 component; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> mci:Mesci_5606(581)54580.72942(2275)1<- K03205  virD4 TRAG family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> mop:Mesop_6190(581)54580.72942(2275)2<- K03205  virD4 TRAG family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> mesw:A9K65_030425(581)54580.62936(2256)2<- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> alf:CFBP5473_23750(672)54779.22911(2563)3-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> aro:B0909_23720(660)53980.72908(2607)1-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> avi:Avi_8210(663)54279.72904(2295)7-- K03205  virD4 virD4; virA/G regulated protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rle:pRL70071(684)54272.92642(314)6-- K03205  virD4 putative transmembrane conjugative DNA transfer protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> hml:HmaOT1_01560(803)54347.31574(492)10-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rde:RD1_A0114(721)52947.61568(971)1-- K03205  virD4 virD4 protein, putative; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> daa:AKL17_3p0121(660)54036.51091(47)10-- K03205  virD4 TraG protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> pami:JCM7686_pAMI8p064(649)54436.81086
1-- K03205  virD4 transport secretion system IV, VirD4 protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rhp:LPB142_16145(660)54335.91086(57)3-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> thas:C6Y53_20090(651)54235.61086(31)3-- K03205  virD4 TraM recognition domain-containing protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> pga:PGA1_c22970(630)53636.41085
0-- K03205  virD4 virD4; putative protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> mmed:Mame_04918(660)54335.41081
0-- K03205  virD4 traG; Conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> oar:OA238_c29370(634)53635.41069(827)1-- K03205  virD4 virD4; putative protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> pgd:Gal_01076(642)53735.91068(57)2-- K03205  virD4 Type IV secretory pathway, VirD4 component; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> hat:RC74_10020(625)53735.61067
0-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> ceh:CEW89_20170(651)54335.41066(385)1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> cid:P73_4709(641)54335.41066(47)7-- K03205  virD4 protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> ppic:PhaeoP14_02070(630)53736.31063(835)1-- K03205  virD4 Type IV secretory pathway, VirD4 component; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> geh:HYN69_19570(663)55034.71057(465)1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rht:NT26_p10278(655)54135.51056(430)5-- K03205  virD4 Putative Type IV secretion pathway VirD4/TraG family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> parr:EOJ32_18780(720)53934.71054(8)3-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rid:RIdsm_05644(651)54335.21053(35)3-- K03205  virD4 traG_3; Conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> oct:FTO60_17370(663)54035.01043
1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> sulz:C1J03_24720(663)53934.91035(690)1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> sagu:CDO87_25495(664)54534.11030(11)1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> tpro:Ga0080559_TMP155(674)54234.91028(2)6-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> con:TQ29_20160(666)54234.91025(10)6-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> ppru:FDP22_23540(669)54634.81024(351)4-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rok:RAK1035_4001(666)54634.61023
0-- K03205  virD4 Coupling protein VirD4, ATPase required for T-DNA transfer; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> dsh:Dshi_3988(666)54234.71020(4)1-- K03205  virD4 virD1; TraG family protein/type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> roh:FIU89_21135(668)54634.41020(418)3-- K03205  virD4 traG1; Conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> cmag:CBW24_16425(661)54234.71019(421)1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rbz:B9057_14645(666)54234.91019
0-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rot:FIV09_19485(666)54634.61019(3)6-- K03205  virD4 traG2; Conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> suam:BOO69_21925(674)54234.71019(48)3-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> malu:KU6B_57200(674)54234.71018(60)4-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> paed:G5B38_21160(666)54634.21017(8)5-- K03205  virD4 type IV secretory system conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> malg:MALG_04627(560)54234.51016(6)2-- K03205  virD4 Type IV secretory pathway, VirD4 component; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> spse:SULPSESMR1_04230(666)54234.91016(1)4-- K03205  virD4 traG; conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rmm:ROSMUCSMR3_04093(666)54234.71015(445)1-- K03205  virD4 traG; conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> suld:B5M07_17570(666)54234.71015(42)1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> lej:ETW24_23045(667)54234.71014(315)2-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> thw:BMG03_20440(666)54234.71014
0-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> sit:TM1040_3794(668)54234.71013(904)1-- K03205  virD4 virD4; Protein virD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> mon:G8E03_16310(661)54034.41010(5)2-- K03205  virD4 type IV secretory system conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> php:PhaeoP97_03943(645)55435.21005
0-- K03205  virD4 Type IV secretory pathway, VirD4 component; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> paro:CUV01_18685(640)51835.71004(30)3-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> paby:Ga0080574_TMP561(591)46436.91002(315)3-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> lvs:LOKVESSMR4R_03969(646)54733.1992(422)2-- K03205  virD4 traG; conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> pzh:CX676_21105(640)52635.4990(18)1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> taw:EI545_20655(660)48936.6984(419)1-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> pye:A6J80_21680(675)53534.2977(143)9-- K03205  virD4 type VI secretion protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rut:FIU92_22235(635)54431.8967(1)2-- K03205  virD4 traG2; Conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> apd:YYY_06555(740)52333.5857
1-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> aph:APH_1402(740)52333.5857
1-- K03205  virD4 virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> apha:WSQ_06540(740)52333.5857
1-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> apy:YYU_06500(740)52333.5857
1-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> ecn:Ecaj_0018(723)52332.9854
2-- K03205  virD4 TRAG protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> ehh:EHF_0992(677)52532.8851
2-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> npp:PP1Y_Spl287(577)51635.3851(178)4-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> spmi:K663_22738(638)52033.7850(239)7-- K03205  virD4 VirD4 type IV secration protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> emr:EMUR_00040(718)49333.9847
3-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> ech:ECH_0040(714)52332.7846
1-- K03205  virD4 virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> echa:ECHHL_1017(714)52332.7846
1-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> echj:ECHJAX_1037(714)52332.7846
1-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> echl:ECHLIB_1037(714)52332.7846
1-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> echp:ECHWP_1011(714)52332.7846
1-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> echs:ECHOSC_1032(714)52332.7846
1-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> echv:ECHSTV_1019(712)52332.7846
1-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> echw:ECHWAK_1030(714)52332.7846
1-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> ren:EF513_03790(1116)56132.6842
0-- K03205  virD4 hypothetical protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> nhm:NHE_0701(568)46835.0841
0-- K03205  virD4 type IV secretory system Conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> npn:JI59_26180(638)51933.3840(568)2-- K03205  virD4 conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> shyd:CJD35_20835(638)51933.3840(3)5-- K03205  virD4 conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> rbt:NOVO_03380(585)51432.3838
0-- K03205  virD4 traG; Conjugal transfer protein traG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> wri:WRi_000090(672)52532.8838
1-- K03205  virD4 virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> smag:AN936_24290(638)51933.3836(252)3-- K03205  virD4 conjugal transfer protein TraG; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> sphf:DM480_17680(603)51533.8836(164)1-- K03205  virD4 type IV secretory system conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> wen:wHa_00080(662)52532.8836
0-- K03205  virD4 virD4; Type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> wbm:Wbm0283(676)52533.3835
1-- K03205  virD4 Type IV secretory pathway, VirD4 component; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> erg:ERGA_CDS_00130(800)52432.4833
1-- K03205  virD4 virD4; Putative virD4 protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> eru:Erum0260(801)52432.4833
1-- K03205  virD4 virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> erw:ERWE_CDS_00130(801)52432.4833
1-- K03205  virD4 virD4; Putative virD4 protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> nri:NRI_0713(641)46834.8832
0-- K03205  virD4 type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> nef:GP480_03005(641)46834.8831
0-- K03205  virD4 type IV secretory system conjugative DNA transfer family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> nse:NSE_0739(641)46834.8831
0-- K03205  virD4 virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> swi:Swit_5000(670)51433.5829(189)1-- K03205  virD4 TRAG family protein; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> woo:wOo_07230(679)52631.7829
1-- K03205  virD4 Type IV secretory pathway VirD4 component; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
> aoh:AOV_04630(812)52332.3827
2-- K03205  virD4 virD4; type IV secretion system protein VirD4; K03205 type IV secretion system protein VirD4 [EC:7.4.2.8]
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