GFIT result for tpr |
[Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
tpr:Tpau_4038 (364 a.a.) |
--  |
  |   | DNA primase small subunit | ||||||
DBHit(Length) | Over- lap | Ident. (%) | Score | margin | Para- log | Cont. | KO | Orth | Current Annotation | |
---|---|---|---|---|---|---|---|---|---|---|
> tpul:TPB0596_43980(365) | 365 | 89.3 | 2292 | (1388) | 2 | -> | ligD_2; ATP-dependent DNA ligase | |||
> tsm:ASU32_22795(362) | 363 | 89.5 | 2285 | (1393) | 3 | -> | ATP-dependent DNA ligase | |||
> nro:K8W59_03315(361) | 364 | 74.5 | 1922 | (1058) | 2 | -- | DNA polymerase domain-containing protein | |||
> nsn:EXE58_12180(360) | 361 | 72.6 | 1870 | (968) | 2 | -- | ATP-dependent DNA ligase | |||
> ncq:K6T13_03585(362) | 364 | 71.7 | 1849 | (974) | 2 | -- | DNA polymerase domain-containing protein | |||
> noq:LN652_09120(361) | 361 | 71.5 | 1848 | (992) | 2 | -- | DNA polymerase domain-containing protein | |||
> npi:G7071_01440(359) | 364 | 70.3 | 1843 | (916) | 2 | -- | DNA polymerase domain-containing protein | |||
> noy:EXE57_07805(361) | 364 | 70.9 | 1837 | (929) | 7 | -- | ATP-dependent DNA ligase | |||
> jay:H7A72_07050(360) | 365 | 71.2 | 1820 | (851) | 2 | -- | DNA polymerase domain-containing protein | |||
> nfc:KG111_03420(363) | 368 | 71.7 | 1819 | (992) | 0 | -- | DNA polymerase domain-containing protein | |||
> nmar:HPC71_04290(364) | 368 | 71.2 | 1818 | (866) | 0 | -- | DNA polymerase domain-containing protein | |||
> noo:FE634_15550(360) | 364 | 71.7 | 1814 | (898) | 3 | -- | DNA polymerase domain-containing protein | |||
> psim:KR76_21650(364) | 367 | 70.6 | 1814 | (952) | 2 | -- | ATP-dependent DNA ligase | |||
> nca:Noca_3665(360) | 364 | 70.6 | 1813 | (937) | 4 | -- | conserved hypothetical protein | |||
> micg:GJV80_08800(365) | 364 | 69.2 | 1808 | (966) | 4 | -- | ATP-dependent DNA ligase | |||
> jte:ASJ30_06995(360) | 365 | 70.4 | 1805 | (827) | 2 | -- | ATP-dependent DNA ligase | |||
> noi:FCL41_03000(359) | 361 | 71.7 | 1802 | (938) | 3 | -- | ATP-dependent DNA ligase | |||
> mph:MLP_23260(359) | 363 | 70.2 | 1793 | (952) | 4 | -- | hypothetical protein | |||
> ndk:I601_0374(361) | 363 | 70.5 | 1792 | (879) | 3 | -- | Putative DNA ligase-like protein | |||
> rhb:NY08_3355(361) | 363 | 70.0 | 1780 | (865) | 3 | -> | ATP-dependent DNA ligase | |||
> rhs:A3Q41_01837(361) | 363 | 70.0 | 1780 | (900) | 2 | -> | hypothetical protein | |||
> jme:EEW87_008145(360) | 364 | 69.5 | 1779 | (801) | 4 | -- | ATP-dependent DNA ligase | |||
> spin:KV203_01885(356) | 357 | 70.3 | 1778 | (906) | 3 | -- | DNA polymerase domain-containing protein | |||
> rfa:A3L23_01522(361) | 363 | 69.4 | 1769 | (888) | 2 | -> | hypothetical protein | |||
> jli:EXU32_07600(360) | 364 | 69.8 | 1768 | (753) | 3 | -> | ATP-dependent DNA ligase | |||
> jcr:O9K63_04125(360) | 364 | 68.4 | 1752 | (780) | 5 | -> | DNA polymerase domain-containing protein | |||
> npc:KUV85_17015(359) | 361 | 68.7 | 1748 | (914) | 3 | -- | DNA polymerase domain-containing protein | |||
> nml:Namu_0821(360) | 364 | 68.4 | 1744 | (855) | 4 | -- | DNA primase small subunit | |||
> naro:CFH99_06080(363) | 367 | 69.5 | 1738 | (874) | 2 | -- | ATP-dependent DNA ligase | |||
> rhop:D8W71_05165(?) | 363 | 67.2 | 1735 | (817) | 0 | -- | - | |||
> rhu:A3Q40_03936(361) | 359 | 68.2 | 1725 | (807) | 2 | -> | hypothetical protein | |||
> nano:G5V58_18050(363) | 365 | 67.9 | 1710 | (785) | 6 | -- | DNA polymerase domain-containing protein | |||
> naqu:ENKNEFLB_03805(353) | 357 | 67.8 | 1710 | (830) | 7 | -- | ligD_5; Multifunctional non-homologous end joining protein LigD | |||
> nbe:Back2_22350(365) | 367 | 66.2 | 1647 | (738) | 2 | -- | ligD; ATP-dependent DNA ligase | |||
> nps:KRR39_06030(354) | 355 | 67.0 | 1598 | (695) | 2 | -- | DNA polymerase domain-containing protein | |||
> xya:ET471_14650(362) | 365 | 61.9 | 1581 | (806) | 2 | -> | ATP-dependent DNA ligase | |||
> nmes:H9L09_18535(356) | 357 | 65.0 | 1562 | (648) | 3 | -- | DNA polymerase domain-containing protein | |||
> aeb:C6I20_06485(347) | 336 | 65.2 | 1558 | (612) | 3 | -- | ATP-dependent DNA ligase | |||
> aez:C3E78_08365(347) | 336 | 63.1 | 1522 | (651) | 2 | -- | ATP-dependent DNA ligase | |||
> awn:NQV15_08535(?) | 336 | 64.0 | 1521 | (616) | 0 | -- | - | |||
> aef:GEV26_08035(347) | 336 | 62.8 | 1517 | (605) | 2 | -- | ATP-dependent DNA ligase | |||
> adb:NP095_08765(?) | 356 | 63.8 | 1507 | (1052) | 0 | -- | - | |||
> asez:H9L21_08545(?) | 353 | 64.0 | 1505 | (1045) | 0 | -- | - | |||
> muz:H4N58_10875(365) | 363 | 62.8 | 1503 | (643) | 5 | -- | DNA polymerase domain-containing protein | |||
> mij:MINS_03330(357) | 354 | 60.2 | 1496 | (551) | 2 | -- | ATP-dependent DNA ligase | |||
> bala:DSM104299_00126(354) | 348 | 62.4 | 1450 | (965) | 0 | -- | ligD_2; Multifunctional non-homologous end joining protein LigD | |||
> lxl:KDY119_03475(391) | 373 | 61.4 | 1447 | (977) | 10 | -- | DNA ligase (ATP) | |||
> sbae:DSM104329_04806(344) | 338 | 62.7 | 1440 | (883) | 2 | -- | ligD_3; Multifunctional non-homologous end joining protein LigD | |||
> parn:NBH00_19660(350) | 352 | 61.4 | 1426 | (1046) | 3 | -- | ligD; non-homologous end-joining DNA ligase | |||
> aer:AERYTH_09335(362) | 362 | 58.6 | 1410 | (950) | 1 | -- | ATP-dependent DNA ligase | |||
> bsol:FSW04_00215(353) | 345 | 62.6 | 1409 | (945) | 3 | -- | DNA polymerase domain-containing protein | |||
> gez:FE251_09910(352) | 354 | 59.0 | 1368 | (900) | 1 | -- | ATP-dependent DNA ligase | |||
> blap:MVA48_01425(361) | 368 | 54.6 | 1336 | (915) | 3 | -- | DNA polymerase domain-containing protein | |||
> gyu:FE374_09815(350) | 354 | 57.6 | 1333 | (415) | 3 | -> | ATP-dependent DNA ligase | |||
> kqi:F1D05_37025(366) | 371 | 54.2 | 1317 | (370) | 4 | -- | DNA polymerase domain-containing protein | |||
> eke:EK0264_17985(360) | 371 | 54.4 | 1305 | (424) | 2 | -> | ATP-dependent DNA ligase | |||
> serj:SGUI_0516(358) | 369 | 54.2 | 1302 | (397) | 5 | -- | ATP-dependent DNA ligase | |||
> cej:GC089_15890(355) | 357 | 57.4 | 1298 | (903) | 1 | -- | ATP-dependent DNA ligase | |||
> celz:E5225_14880(355) | 359 | 56.8 | 1298 | (841) | 3 | -- | ATP-dependent DNA ligase | |||
> alo:CRK55898(351) | 339 | 56.3 | 1291 | (383) | 6 | -- | ATP-dependent DNA ligase | |||
> psic:J4E96_01505(364) | 366 | 55.7 | 1285 | (935) | 3 | -- | ligD; non-homologous end-joining DNA ligase | |||
> cpal:F1D97_05185(363) | 358 | 56.4 | 1283 | (926) | 3 | -- | ligD; non-homologous end-joining DNA ligase | |||
> cche:NP064_12495(356) | 357 | 54.9 | 1282 | (878) | 0 | -- | ligD; non-homologous end-joining DNA ligase | |||
> oek:FFI11_014000(363) | 365 | 54.8 | 1279 | (841) | 1 | -> | ATP-dependent DNA ligase | |||
> amaz:LUW76_10115(360) | 356 | 54.5 | 1276 | (865) | 5 | -- | DNA polymerase domain-containing protein | |||
> cfi:Celf_0509(356) | 360 | 56.1 | 1274 | (827) | 4 | -- | DNA polymerase LigD, polymerase domain protein | |||
> cfl:Cfla_0584(354) | 359 | 56.0 | 1274 | (829) | 5 | -- | DNA polymerase LigD, polymerase domain protein | |||
> actu:Actkin_01739(347) | 353 | 55.8 | 1272 | (303) | 4 | -- | ykoU_1; putative ATP-dependent DNA ligase YkoU | |||
> cga:Celgi_0324(365) | 358 | 56.1 | 1272 | (926) | 3 | -- | DNA polymerase LigD, polymerase domain protein | |||
> cwn:NP075_03005(354) | 361 | 56.8 | 1272 | (787) | 0 | -- | ligD; non-homologous end-joining DNA ligase | |||
> nhy:JQS43_07735(350) | 356 | 56.2 | 1272 | (861) | 9 | -- | ligD; non-homologous end-joining DNA ligase | |||
> cxie:NP048_03250(354) | 362 | 56.4 | 1269 | (803) | 0 | -- | ligD; non-homologous end-joining DNA ligase | |||
> sesp:BN6_18810(333) | 336 | 56.5 | 1269 | (296) | 9 | -- | DNA polymerase LigD, polymerase domain protein | |||
> cdon:KKR89_02990(354) | 361 | 56.2 | 1266 | (800) | 4 | -- | ligD; non-homologous end-joining DNA ligase | |||
> celh:GXP71_19000(356) | 361 | 56.0 | 1264 | (895) | 3 | -- | DNA polymerase domain-containing protein | |||
> ams:AMIS_68170(340) | 363 | 53.2 | 1263 | (362) | 7 | -- | hypothetical protein | |||
> cwan:KG103_03105(354) | 359 | 56.0 | 1263 | (792) | 4 | -- | ligD; non-homologous end-joining DNA ligase | |||
> ido:I598_0544(358) | 361 | 57.3 | 1262 | (863) | 1 | -> | ykoU; putative ATP-dependent DNA ligase YkoU | |||
> cceu:CBR64_18040(358) | 359 | 55.2 | 1261 | (786) | 5 | -> | ATP-dependent DNA ligase | |||
> cet:B8281_13580(358) | 359 | 55.2 | 1261 | (777) | 1 | -> | ATP-dependent DNA ligase | |||
> pfla:Pflav_089400(343) | 364 | 52.7 | 1261 | (480) | 4 | -- | ATP-dependent DNA ligase | |||
> cez:CBP52_15675(359) | 360 | 56.4 | 1260 | (902) | 1 | -- | ATP-dependent DNA ligase | |||
> cira:LFM56_15525(354) | 361 | 54.8 | 1260 | (777) | 5 | -- | ligD; non-homologous end-joining DNA ligase | |||
> agra:AGRA3207_001279(360) | 356 | 54.2 | 1256 | (833) | 6 | -- | DNA polymerase domain-containing protein | |||
> mcab:HXZ27_09455(342) | 356 | 56.5 | 1255 | (210) | 14 | -- | DNA polymerase domain-containing protein | |||
> orz:FNH13_09540(353) | 366 | 52.2 | 1255 | (359) | 4 | -> | DNA polymerase domain-containing protein | |||
> serw:FY030_06375(354) | 366 | 51.1 | 1255 | (311) | 3 | -> | ATP-dependent DNA ligase | |||
> cfen:KG102_01545(356) | 359 | 55.7 | 1254 | (773) | 4 | -- | DNA polymerase domain-containing protein | |||
> cros:N8J89_10920(343) | 357 | 53.8 | 1254 | (847) | 6 | -- | ligD; non-homologous end-joining DNA ligase | |||
> aou:ACTOB_007361(?) | 365 | 53.7 | 1253 | (294) | 0 | -- | - | |||
> cprt:FIC82_012425(358) | 359 | 54.3 | 1252 | (784) | 6 | -> | DNA polymerase domain-containing protein | |||
> mil:ML5_1895(341) | 341 | 56.3 | 1250 | (221) | 6 | -- | DNA polymerase LigD, polymerase domain protein | |||
> rhal:LQF10_11465(348) | 365 | 53.2 | 1250 | (337) | 2 | -> | ligD; non-homologous end-joining DNA ligase | |||
> mau:Micau_1636(341) | 341 | 56.3 | 1249 | (200) | 6 | -- | DNA polymerase LigD, polymerase domain protein | |||
> yim:J5M86_08495(352) | 371 | 52.0 | 1249 | (313) | 2 | -> | ligD; non-homologous end-joining DNA ligase | |||
> mchl:PVK74_29395(341) | 341 | 56.0 | 1246 | (191) | 8 | -- | ligD; non-homologous end-joining DNA ligase | |||
> athm:L1857_26430(339) | 356 | 53.9 | 1244 | (326) | 9 | -- | ligD; non-homologous end-joining DNA ligase | |||
> kal:KALB_6787(338) | 345 | 54.2 | 1244 | (1138) | 3 | -- | hypothetical protein | |||
> micb:MicB006_1660(341) | 341 | 55.7 | 1244 | (207) | 8 | -- | ATP-dependent DNA ligase | |||
> kut:JJ691_98260(331) | 336 | 56.0 | 1241 | (334) | 8 | -- | lig_6; ATP-dependent DNA ligase |