GFIT result for
ypf
|
GFIT result for
ypf
|
| [Motif] [Align] [N-J Tree] [Dendrogram] [Gene Cluster] |
| ypf:BZ19_3080 (1527 a.a.) |
-- |
RHS repeat-associated core domain protein | |||||||
| DBHit(Length) | Over- lap | Ident. (%) | Score | Para- log | Cont. | KO | Orth | Current Annotation | |
|---|---|---|---|---|---|---|---|---|---|
| > ypi:YpsIP31758_0341(1527) | 1527 | 100.0 | 10286 | 13 | -> | YD/RHS repeat protein | |||
| > ypc:BZ23_3215(1520) | 1389 | 99.6 | 9330 | 11 | -> | RHS repeat-associated core domain protein | |||
| > ypo:BZ17_2985(1520) | 1389 | 99.5 | 9321 | 10 | -> | RHS repeat-associated core domain protein | |||
| > yps:YPTB3615(1520) | 1389 | 99.5 | 9321 | 8 | -> | putative membrane protein | |||
| > ypu:BZ21_2943(1520) | 1389 | 99.5 | 9321 | 9 | -> | RHS repeat-associated core domain protein | |||
| > ypb:YPTS_3805(1520) | 1389 | 99.4 | 9315 | 7 | -> | YD repeat protein | |||
| > ypa:YPA_3420(1512) | 1488 | 93.1 | 9197 | 9 | -> | putative membrane protein | |||
| > ype:YPO3615(1512) | 1488 | 93.1 | 9197 | 9 | -> | putative membrane protein | |||
| > yph:YPC_4402(1512) | 1488 | 93.1 | 9197 | 7 | -> | putative membrane protein | |||
| > ypj:CH55_2586(1512) | 1488 | 93.1 | 9197 | 8 | -> | RHS repeat-associated core domain protein | |||
| > ypk:y0255(1514) | 1488 | 93.1 | 9197 | 8 | -> | Rhs-like core protein | |||
| > ypl:CH46_1410(1512) | 1488 | 93.1 | 9197 | 9 | -> | RHS repeat-associated core domain protein | |||
| > ypn:YPN_3555(1512) | 1488 | 93.1 | 9197 | 8 | -> | membrane protein | |||
| > ypp:YPDSF_0222(1512) | 1488 | 93.1 | 9197 | 8 | -> | membrane protein | |||
| > ypt:A1122_07485(1512) | 1488 | 93.1 | 9197 | 9 | -> | Rhs-like core protein | |||
| > ypv:BZ15_4059(1512) | 1488 | 93.1 | 9197 | 9 | -> | RHS repeat-associated core domain protein | |||
| > ypw:CH59_2370(1512) | 1488 | 93.1 | 9197 | 8 | -> | RHS repeat-associated core domain protein | |||
| > ypx:YPD8_3232(1512) | 1488 | 93.1 | 9197 | 9 | -> | hypothetical protein | |||
| > ypz:YPZ3_3105(1512) | 1488 | 93.1 | 9197 | 9 | -> | hypothetical protein | |||
| > ypm:YP_3933(1513) | 1488 | 92.9 | 9169 | 8 | -> | rhsA3; putative membrane protein | |||
| > ypd:YPD4_3093(1512) | 1488 | 92.7 | 9137 | 9 | -> | hypothetical protein | |||
| > ypy:YPK_0410(1189) | 1058 | 99.2 | 7147 | 7 | -- | YD repeat protein | |||
| > ypq:DJ40_2799(1168) | 1161 | 92.2 | 7128 | 8 | -- | RHS repeat-associated core domain protein | |||
| > ypr:BZ20_2500(1168) | 1161 | 92.2 | 7128 | 7 | -- | RHS repeat-associated core domain protein | |||
| > ysi:BF17_05685(1500) | 1407 | 69.6 | 6509 | 9 | -> | hypothetical protein | |||
| > yal:AT01_1864(1509) | 1480 | 58.9 | 5782 | 2 | -> | RHS repeat-associated core domain protein | |||
| > xbo:XBJ1_0281(1525) | 1456 | 51.0 | 4692 | 9 | -> | Putative membrane protein | |||
| > xbv:XBW1_1180(1530) | 1487 | 49.2 | 4667 | 5 | -> | Putative membrane protein | |||
| > xgr:QL128_20250(?) | 1485 | 49.1 | 4655 | 0 | -- | - | |||
| > pakh:B0X70_01635(1527) | 1416 | 49.4 | 4489 | 22 | -> | hypothetical protein | |||
| > plui:CE143_01620(1527) | 1416 | 49.4 | 4488 | 22 | -> | hypothetical protein | |||
| > xbu:HGO23_14430(1531) | 1488 | 48.1 | 4476 | 5 | -> | PAAR domain-containing protein | |||
| > xdo:XDD1_1491(1552) | 1429 | 49.3 | 4473 | 19 | -> | Putative membrane protein | |||
| > plu:plu3120(1498) | 1400 | 49.4 | 4450 | 25 | -- | unnamed protein product; Some similarities with hypothetical protein. RHS protein signature. Putative transmembrane protein | |||
| > plum:A4R40_15595(1498) | 1400 | 49.4 | 4450 | 22 | -- | hypothetical protein | |||
| > sfg:AV650_13880(1546) | 1561 | 46.1 | 4421 | 6 | -> | hypothetical protein | |||
| > erwi:GN242_06600(1545) | 1557 | 45.2 | 4222 | 20 | -> | hypothetical protein | |||
| > pay:PAU_03014(1279) | 1282 | 47.7 | 3964 | 25 | -> | Putative membrane protein | |||
| > rvc:J9880_23440(1418) | 1299 | 46.4 | 3769 | 10 | -- | DUF6531 domain-containing protein | |||
| > race:JHW33_25420(1423) | 1308 | 45.9 | 3712 | 3 | -- | RHS domain-containing protein | |||
| > lya:RDV84_06435(?) | 1472 | 42.3 | 3690 | 0 | -- | - | |||
| > xpo:XPG1_0243(1565) | 1083 | 51.0 | 3683 | 6 | -- | conserved protein of unknown function | |||
| > xnm:XNC2_1428(1545) | 1110 | 48.0 | 3455 | 17 | -- | Complete genome; segment 11/17 | |||
| > pmr:PMI1120(1703) | 1294 | 42.7 | 3450 | 2 | -- | Rhs-family protein | |||
| > ptha:OI982_05130(?) | 1225 | 42.9 | 3442 | 0 | -- | - | |||
| > psta:BGK56_00310(1588) | 1202 | 43.2 | 3417 | 5 | -- | type IV secretion protein Rhs | |||
| > pmag:JI723_13005(1580) | 1320 | 40.6 | 3392 | 3 | -- | RHS repeat protein | |||
| > psi:S70_18055(1594) | 1198 | 43.3 | 3381 | 10 | -- | Rhs family protein | |||
| > pcol:F1325_14145(1511) | 1124 | 43.8 | 3330 | 2 | -- | DUF4150 domain-containing protein | |||
| > prot:BTA34_12355(1508) | 1165 | 43.1 | 3307 | 4 | -- | hypothetical protein | |||
| > buf:D8682_01645(1473) | 1471 | 36.2 | 2946 | 4 | -- | DUF4150 domain-containing protein | |||
| > ptrl:OU419_15255(?) | 1379 | 38.9 | 2944 | 0 | -- | - | |||
| > bft:MNO13_20470(1399) | 1214 | 40.0 | 2926 | 7 | -- | DUF6531 domain-containing protein | |||
| > lew:DAI21_08465(1456) | 1140 | 41.8 | 2888 | 0 | -- | hypothetical protein | |||
| > supe:P0H77_18735(1479) | 1143 | 41.3 | 2858 | 12 | -- | DUF4150 domain-containing protein | |||
| > cro:ROD_13591(1477) | 1099 | 42.2 | 2856 | 3 | -- | putative Rhs protein | |||
| > pami:JCM7686_2967(1611) | 1622 | 33.8 | 2822 | 12 | -> | hypothetical protein | |||
| > toe:QMG90_03420(1446) | 1117 | 40.8 | 2799 | 8 | -- | DUF4150 domain-containing protein | |||
| > sbg:SBG_1846(1535) | 1179 | 39.4 | 2788 | 5 | -- | Rhs-family protein | |||
| > sbz:A464_2174(1530) | 1197 | 39.5 | 2776 | 11 | -- | hypothetical protein | |||
| > sbv:N643_09065(1543) | 1117 | 40.5 | 2773 | 10 | -- | membrane protein | |||
| > paro:CUV01_10170(1527) | 1412 | 35.5 | 2670 | 8 | -> | hypothetical protein | |||
| > pzh:CX676_10920(1356) | 1352 | 36.9 | 2646 | 5 | -- | hypothetical protein | |||
| > palp:JHW40_01745(1581) | 1449 | 33.7 | 2597 | 15 | -> | PAAR/RHS domain-containing protein | |||
| > psap:JHX88_05970(1594) | 1604 | 31.4 | 2499 | 6 | -- | PAAR domain-containing protein | |||
| > bpsl:WS57_02645(1536) | 1557 | 32.2 | 2375 | 20 | -> | hypothetical protein | |||
| > gbz:JZM60_07255(1459) | 1517 | 33.3 | 2355 | 6 | -> | PAAR domain-containing protein | |||
| > bch:Bcen2424_5023(1494) | 1371 | 34.8 | 2353 | 35 | -> | YD repeat protein | |||
| > mmai:sS8_3559(1546) | 1398 | 35.3 | 2345 | 35 | -> | putative rhs-related transmembrane protein | |||
| > bcj:BCAM2253(1515) | 1367 | 34.0 | 2337 | 51 | -> | RHS-family protein | |||
| > bceo:I35_6145(1515) | 1367 | 33.9 | 2329 | 46 | -> | Rhs-family protein | |||
| > bcm:Bcenmc03_5261(1487) | 1370 | 34.2 | 2320 | 38 | -> | YD repeat protein | |||
| > bmul:NP80_4978(1534) | 1557 | 32.2 | 2314 | 25 | -> | RHS repeat-associated core domain protein | |||
| > bgd:bgla_1g12200(1496) | 1529 | 32.6 | 2310 | 54 | -> | Rhs-related membrane protein | |||
| > gma:AciX8_3261(1486) | 1492 | 32.3 | 2300 | 4 | -> | RHS repeat-associated core domain protein | |||
| > rsl:RPSI07_mp1170(1538) | 1532 | 33.5 | 2296 | 22 | -> | putative rhs-related transmembrane protein | |||
| > bac:BamMC406_4951(1495) | 1471 | 32.4 | 2284 | 44 | -> | YD repeat protein | |||
| > rse:F504_4047(1517) | 1425 | 34.0 | 2281 | 17 | -> | Phage tail fiber protein | |||
| > rnc:GO999_19750(1521) | 1424 | 33.9 | 2274 | 19 | -> | hypothetical protein | |||
| > bpyr:ABD05_24040(1533) | 1561 | 31.9 | 2271 | 18 | -> | membrane protein | |||
| > rsm:CMR15_mp20245(1475) | 1461 | 33.1 | 2270 | 27 | -> | putative rhs-related transmembrane protein | |||
| > rpu:CDC45_23325(1517) | 1425 | 33.9 | 2266 | 28 | -> | hypothetical protein | |||
| > rso:RSp1137(1517) | 1425 | 33.9 | 2266 | 32 | -> | putative rhs-related transmembrane protein | |||
| > tcar:U0034_13540(?) | 1487 | 32.8 | 2235 | 0 | -- | - | |||
| > rsg:JK151_13280(1523) | 1404 | 33.9 | 2233 | 16 | -> | PAAR domain-containing protein | |||
| > pcaf:DSC91_001370(1461) | 1414 | 32.7 | 2188 | 21 | -> | hypothetical protein | |||
| > rwe:KOL96_01530(1541) | 1364 | 32.8 | 2185 | 18 | -> | PAAR domain-containing protein | |||
| > bgo:BM43_2554(1504) | 1403 | 32.9 | 2165 | 52 | -> | RHS repeat-associated core domain protein | |||
| > bpsm:BBQ_5175(1541) | 1439 | 32.1 | 2150 | 38 | -> | RHS repeat-associated core domain protein | |||
| > bpsu:BBN_4421(1541) | 1439 | 32.1 | 2150 | 37 | -> | RHS repeat-associated core domain protein | |||
| > bmal:DM55_4253(1537) | 1439 | 32.2 | 2147 | 24 | -> | RHS repeat-associated core domain protein | |||
| > bmaq:DM76_4953(1537) | 1439 | 32.2 | 2147 | 24 | -> | RHS repeat-associated core domain protein | |||
| > bmab:BM45_3338(1541) | 1439 | 32.0 | 2146 | 29 | -> | RHS repeat-associated core domain protein | |||
| > bmae:DM78_3919(1541) | 1439 | 32.0 | 2146 | 26 | -> | RHS repeat-associated core domain protein | |||
| > bmaf:DM51_4925(1541) | 1439 | 32.0 | 2146 | 30 | -> | RHS repeat-associated core domain protein | |||
| > bmai:DM57_10695(1541) | 1439 | 32.0 | 2146 | 28 | -> | type IV secretion protein Rhs | |||
| > bmaz:BM44_4216(1541) | 1439 | 32.0 | 2146 | 30 | -> | RHS repeat-associated core domain protein | |||
| > bml:BMA10229_0509(1541) | 1439 | 32.0 | 2146 | 27 | -> | YD repeat protein | |||
| > bmn:BMA10247_A1059(1541) | 1439 | 32.0 | 2146 | 28 | -- | YD repeat protein | |||
| > bmv:BMASAVP1_0238(1541) | 1439 | 32.0 | 2146 | 22 | -> | YD repeat protein | |||