KEGG   DISEASE: Congenital disorders of glycosylation type II
Entry
H00119                      Disease                                
Name
Congenital disorders of glycosylation type II
Description
Congenital disorders of glycosylation (CDG) are a group of disorders caused by defects in various genes for N-glycan biosynthesis. CDG-II is defined by mutations in genes encoding enzymes in the processing of N-glycans on the glycosylated proteins either late in the endoplasmic reticulum or the Golgi compartments. Multiple subtypes have been identified although the numbers and forms of affected individuals with CDG-I are still much more. In contrast to type I, the type II patients show a more severe psychomotor retardation, no peripheral neuropathy and a cerebellar hypoplasia. According to the serum transferrin glycoform, a portion of CDG-II can be diagnosed. Distinct from CDG-I, the serum trisialo- and asialotransferrin are increased in CDG-II.
Category
Inherited metabolic disorder
Brite
Human diseases in ICD-11 classification [BR:br08403]
 05 Endocrine, nutritional or metabolic diseases
  Metabolic disorders
   Inborn errors of metabolism
    5C54  Inborn errors of glycosylation or other specified protein modification
     H00119  Congenital disorders of glycosylation type II
Pathway-based classification of diseases [BR:br08402]
 Glycan/glycoprotein metabolism
  nt06015  N-Glycan biosynthesis
   H00119  Congenital disorders of glycosylation type II
  nt06035  Blood group carbohydrate antigen biosynthesis
   H00119  Congenital disorders of glycosylation type II
Pathway
hsa00510  N-Glycan biosynthesis
Network
nt06015 N-Glycan biosynthesis
nt06035 Blood group carbohydrate antigen biosynthesis
Gene
(CDG2A) MGAT2 [HSA:4247] [KO:K00736]
(CDG2B) GCS1 [HSA:7841] [KO:K01228]
(CDG2C) SLC35C1 [HSA:55343] [KO:K15279]
(CDG2D) B4GALT1 [HSA:2683] [KO:K07966]
(CDG2E) COG7 [HSA:91949] [KO:K20294]
(CDG2F) SLC35A1 [HSA:10559] [KO:K15272]
(CDG2G) COG1 [HSA:9382] [KO:K20288]
(CDG2H) COG8 [HSA:84342] [KO:K20295]
(CDG2I) COG5 [HSA:10466] [KO:K20292]
(CDG2J) COG4 [HSA:25839] [KO:K20291]
(CDG2K) TMEM165 [HSA:55858] [KO:K23541]
(CDG2L) COG6 [HSA:57511] [KO:K20293]
(CDG2M) SLC35A2 [HSA:7355] [KO:K15272]
(CDG2N) SLC39A8 [HSA:64116] [KO:K14714]
(CDG2O) CCDC115 [HSA:84317] [KO:K23543]
(CDG2P) TMEM199 [HSA:147007] [KO:K23542]
(CDG2Q) COG2 [HSA:22796] [KO:K20289]
(CDG2R) ATP6AP2 [HSA:10159] [KO:K19514]
(CDG2S) ATP6AP1 [HSA:537] [KO:K03662]
(CDG2T) GALNT2 [HSA:2590] [KO:K00710]
(CDG2V) EDEM3 [HSA:80267] [KO:K10086]
(CDG2W) SLC37A4 [HSA:2542] [KO:K08171]
(CDG2Y) GET4 [HSA:51608] [KO:K23387]
(CDG2Z) CAMLG [HSA:819] [KO:K22385]
(CDG2AA) STX5 [HSA:6811] [KO:K08490]
(CDG2BB) COG3 [HSA:83548] [KO:K20290]
Other DBs
ICD-11: 5C54.0
ICD-10: E77.8
MeSH: D018981
OMIM: 212066 606056 266265 607091 603585 608779 611209 611182 613612 613489 614727 614576 300896 616721 616828 616829 617395 301045 300972 618885 619493 619525 620200 620201 620454 620546
Reference
PMID:7944531
  Authors
Jaeken J, Schachter H, Carchon H, De Cock P, Coddeville B, Spik G
  Title
Carbohydrate deficient glycoprotein syndrome type II: a deficiency in Golgi localised N-acetyl-glucosaminyltransferase II.
  Journal
Arch Dis Child 71:123-7 (1994)
DOI:10.1136/adc.71.2.123
Reference
  Authors
Schachter H, Jaeken J
  Title
Carbohydrate-deficient glycoprotein syndrome type II.
  Journal
Biochim Biophys Acta 1455:179-92 (1999)
DOI:10.1016/S0925-4439(99)00054-X
Reference
  Authors
Jaeken J, Matthijs G
  Title
Congenital disorders of glycosylation.
  Journal
Annu Rev Genomics Hum Genet 2:129-51 (2001)
DOI:10.1146/annurev.genom.2.1.129
Reference
PMID:11228641 (CDG2A)
  Authors
Cormier-Daire V, Amiel J, Vuillaumier-Barrot S, Tan J, Durand G, Munnich A, Le Merrer M, Seta N
  Title
Congenital disorders of glycosylation IIa cause growth retardation, mental retardation, and facial dysmorphism.
  Journal
J Med Genet 37:875-7 (2000)
DOI:10.1136/jmg.37.11.875
Reference
PMID:10788335 (CDG2B)
  Authors
De Praeter CM, Gerwig GJ, Bause E, Nuytinck LK, Vliegenthart JF, Breuer W, Kamerling JP, Espeel MF, Martin JJ, De Paepe AM, Chan NW, Dacremont GA, Van Coster RN
  Title
A novel disorder caused by defective biosynthesis of N-linked oligosaccharides due to glucosidase I deficiency.
  Journal
Am J Hum Genet 66:1744-56 (2000)
DOI:10.1086/302948
Reference
PMID:11326280 (CDG2C)
  Authors
Lubke T, Marquardt T, Etzioni A, Hartmann E, von Figura K, Korner C
  Title
Complementation cloning identifies CDG-IIc, a new type of congenital disorders of glycosylation, as a GDP-fucose transporter deficiency.
  Journal
Nat Genet 28:73-6 (2001)
DOI:10.1038/88299
Reference
PMID:11901181 (CDG2D)
  Authors
Hansske B, Thiel C, Lubke T, Hasilik M, Honing S, Peters V, Heidemann PH, Hoffmann GF, Berger EG, von Figura K, Korner C
  Title
Deficiency of UDP-galactose:N-acetylglucosamine beta-1,4-galactosyltransferase I causes the congenital disorder of glycosylation type IId.
  Journal
J Clin Invest 109:725-33 (2002)
DOI:10.1172/JCI14010
Reference
PMID:17356545 (CDG2E)
  Authors
Morava E, Zeevaert R, Korsch E, Huijben K, Wopereis S, Matthijs G, Keymolen K, Lefeber DJ, De Meirleir L, Wevers RA
  Title
A common mutation in the COG7 gene with a consistent phenotype including microcephaly, adducted thumbs, growth retardation, VSD and episodes of hyperthermia.
  Journal
Eur J Hum Genet 15:638-45 (2007)
DOI:10.1038/sj.ejhg.5201813
Reference
PMID:15576474 (CDG2F)
  Authors
Martinez-Duncker I, Dupre T, Piller V, Piller F, Candelier JJ, Trichet C, Tchernia G, Oriol R, Mollicone R
  Title
Genetic complementation reveals a novel human congenital disorder of glycosylation of type II, due to inactivation of the Golgi CMP-sialic acid transporter.
  Journal
Blood 105:2671-6 (2005)
DOI:10.1182/blood-2004-09-3509
Reference
PMID:16537452 (CDG2G)
  Authors
Foulquier F, Vasile E, Schollen E, Callewaert N, Raemaekers T, Quelhas D, Jaeken J, Mills P, Winchester B, Krieger M, Annaert W, Matthijs G
  Title
Conserved oligomeric Golgi complex subunit 1 deficiency reveals a previously uncharacterized congenital disorder of glycosylation type II.
  Journal
Proc Natl Acad Sci U S A 103:3764-9 (2006)
DOI:10.1073/pnas.0507685103
Reference
PMID:17220172 (CDG2H)
  Authors
Foulquier F, Ungar D, Reynders E, Zeevaert R, Mills P, Garcia-Silva MT, Briones P, Winchester B, Morelle W, Krieger M, Annaert W, Matthijs G
  Title
A new inborn error of glycosylation due to a Cog8 deficiency reveals a critical role for the Cog1-Cog8 interaction in COG complex formation.
  Journal
Hum Mol Genet 16:717-30 (2007)
DOI:10.1093/hmg/ddl476
Reference
PMID:19690088 (CDG2I)
  Authors
Paesold-Burda P, Maag C, Troxler H, Foulquier F, Kleinert P, Schnabel S, Baumgartner M, Hennet T
  Title
Deficiency in COG5 causes a moderate form of congenital disorders of glycosylation.
  Journal
Hum Mol Genet 18:4350-6 (2009)
DOI:10.1093/hmg/ddp389
Reference
PMID:19494034 (CDG2J)
  Authors
Reynders E, Foulquier F, Leao Teles E, Quelhas D, Morelle W, Rabouille C, Annaert W, Matthijs G
  Title
Golgi function and dysfunction in the first COG4-deficient CDG type II patient.
  Journal
Hum Mol Genet 18:3244-56 (2009)
DOI:10.1093/hmg/ddp262
Reference
PMID:22683087 (CDG2K)
  Authors
Foulquier F, Amyere M, Jaeken J, Zeevaert R, Schollen E, Race V, Bammens R, Morelle W, Rosnoblet C, Legrand D, Demaegd D, Buist N, Cheillan D, Guffon N, Morsomme P, Annaert W, Freeze HH, Van Schaftingen E, Vikkula M, Matthijs G
  Title
TMEM165 deficiency causes a congenital disorder of glycosylation.
  Journal
Am J Hum Genet 91:15-26 (2012)
DOI:10.1016/j.ajhg.2012.05.002
Reference
PMID:23430903 (CDG2L)
  Authors
Huybrechts S, De Laet C, Bontems P, Rooze S, Souayah H, Sznajer Y, Sturiale L, Garozzo D, Matthijs G, Ferster A, Jaeken J, Goyens P
  Title
Deficiency of Subunit 6 of the Conserved Oligomeric Golgi Complex (COG6-CDG): Second Patient, Different Phenotype.
  Journal
JIMD Rep 4:103-8 (2012)
DOI:10.1007/8904_2011_79
Reference
PMID:23561849 (CDG2M)
  Authors
Ng BG, Buckingham KJ, Raymond K, Kircher M, Turner EH, He M, Smith JD, Eroshkin A, Szybowska M, Losfeld ME, Chong JX, Kozenko M, Li C, Patterson MC, Gilbert RD, Nickerson DA, Shendure J, Bamshad MJ, Freeze HH
  Title
Mosaicism of the UDP-galactose transporter SLC35A2 causes a congenital disorder of glycosylation.
  Journal
Am J Hum Genet 92:632-6 (2013)
DOI:10.1016/j.ajhg.2013.03.012
Reference
PMID:26637979 (CDG2N)
  Authors
Park JH, Hogrebe M, Gruneberg M, DuChesne I, von der Heiden AL, Reunert J, Schlingmann KP, Boycott KM, Beaulieu CL, Mhanni AA, Innes AM, Hortnagel K, Biskup S, Gleixner EM, Kurlemann G, Fiedler B, Omran H, Rutsch F, Wada Y, Tsiakas K, Santer R, Nebert DW, Rust S, Marquardt T
  Title
SLC39A8 Deficiency: A Disorder of Manganese Transport and Glycosylation.
  Journal
Am J Hum Genet 97:894-903 (2015)
DOI:10.1016/j.ajhg.2015.11.003
Reference
PMID:26833332 (CDG2O)
  Authors
Jansen JC, Cirak S, van Scherpenzeel M, Timal S, Reunert J, Rust S, Perez B, Vicogne D, Krawitz P, Wada Y, Ashikov A, Perez-Cerda C, Medrano C, Arnoldy A, Hoischen A, Huijben K, Steenbergen G, Quelhas D, Diogo L, Rymen D, Jaeken J, Guffon N, Cheillan D, van den Heuvel LP, Maeda Y, Kaiser O, Schara U, Gerner P, van den Boogert MA, Holleboom AG, Nassogne MC, Sokal E, Salomon J, van den Bogaart G, Drenth JP, Huynen MA, Veltman JA, Wevers RA, Morava E, Matthijs G, Foulquier F, Marquardt T, Lefeber DJ
  Title
CCDC115 Deficiency Causes a Disorder of Golgi Homeostasis with Abnormal Protein Glycosylation.
  Journal
Am J Hum Genet 98:310-21 (2016)
DOI:10.1016/j.ajhg.2015.12.010
Reference
PMID:26833330 (CDG2P)
  Authors
Jansen JC, Timal S, van Scherpenzeel M, Michelakakis H, Vicogne D, Ashikov A, Moraitou M, Hoischen A, Huijben K, Steenbergen G, van den Boogert MA, Porta F, Calvo PL, Mavrikou M, Cenacchi G, van den Bogaart G, Salomon J, Holleboom AG, Rodenburg RJ, Drenth JP, Huynen MA, Wevers RA, Morava E, Foulquier F, Veltman JA, Lefeber DJ
  Title
TMEM199 Deficiency Is a Disorder of Golgi Homeostasis Characterized by Elevated Aminotransferases, Alkaline Phosphatase, and Cholesterol and Abnormal Glycosylation.
  Journal
Am J Hum Genet 98:322-30 (2016)
DOI:10.1016/j.ajhg.2015.12.011
Reference
PMID:24784932 (CDG2Q)
  Authors
Kodera H, Ando N, Yuasa I, Wada Y, Tsurusaki Y, Nakashima M, Miyake N, Saitoh S, Matsumoto N, Saitsu H
  Title
Mutations in COG2 encoding a subunit of the conserved oligomeric golgi complex cause a congenital disorder of glycosylation.
  Journal
Clin Genet 87:455-60 (2015)
DOI:10.1111/cge.12417
Reference
PMID:29127204 (CDG2R)
  Authors
Rujano MA, Cannata Serio M, Panasyuk G, Peanne R, Reunert J, Rymen D, Hauser V, Park JH, Freisinger P, Souche E, Guida MC, Maier EM, Wada Y, Jager S, Krogan NJ, Kretz O, Nobre S, Garcia P, Quelhas D, Bird TD, Raskind WH, Schwake M, Duvet S, Foulquier F, Matthijs G, Marquardt T, Simons M
  Title
Mutations in the X-linked ATP6AP2 cause a glycosylation disorder with autophagic defects.
  Journal
J Exp Med 214:3707-3729 (2017)
DOI:10.1084/jem.20170453
Reference
PMID:27231034 (CDG2S)
  Authors
Jansen EJ, Timal S, Ryan M, Ashikov A, van Scherpenzeel M, Graham LA, Mandel H, Hoischen A, Iancu TC, Raymond K, Steenbergen G, Gilissen C, Huijben K, van Bakel NH, Maeda Y, Rodenburg RJ, Adamowicz M, Crushell E, Koenen H, Adams D, Vodopiutz J, Greber-Platzer S, Muller T, Dueckers G, Morava E, Sykut-Cegielska J, Martens GJ, Wevers RA, Niehues T, Huynen MA, Veltman JA, Stevens TH, Lefeber DJ
  Title
ATP6AP1 deficiency causes an immunodeficiency with hepatopathy, cognitive impairment and abnormal protein glycosylation.
  Journal
Nat Commun 7:11600 (2016)
DOI:10.1038/ncomms11600
Reference
PMID:27508872 (CDG2T)
  Authors
Khetarpal SA, Schjoldager KT, Christoffersen C, Raghavan A, Edmondson AC, Reutter HM, Ahmed B, Ouazzani R, Peloso GM, Vitali C, Zhao W, Somasundara AV, Millar JS, Park Y, Fernando G, Livanov V, Choi S, Noe E, Patel P, Ho SP, Kirchgessner TG, Wandall HH, Hansen L, Bennett EP, Vakhrushev SY, Saleheen D, Kathiresan S, Brown CD, Abou Jamra R, LeGuern E, Clausen H, Rader DJ
  Title
Loss of Function of GALNT2 Lowers High-Density Lipoproteins in Humans, Nonhuman Primates, and Rodents.
  Journal
Cell Metab 24:234-45 (2016)
DOI:10.1016/j.cmet.2016.07.012
Reference
PMID:34143952 (CDG2V)
  Authors
Polla DL, Edmondson AC, Duvet S, March ME, Sousa AB, Lehman A, Niyazov D, van Dijk F, Demirdas S, van Slegtenhorst MA, Kievit AJA, Schulz C, Armstrong L, Bi X, Rader DJ, Izumi K, Zackai EH, de Franco E, Jorge P, Huffels SC, Hommersom M, Ellard S, Lefeber DJ, Santani A, Hand NJ, van Bokhoven H, He M, de Brouwer APM
  Title
Bi-allelic variants in the ER quality-control mannosidase gene EDEM3 cause a congenital disorder of glycosylation.
  Journal
Am J Hum Genet 108:1342-1349 (2021)
DOI:10.1016/j.ajhg.2021.05.010
Reference
PMID:32884905 (CDG2W)
  Authors
Marquardt T, Bzduch V, Hogrebe M, Rust S, Reunert J, Gruneberg M, Park J, Callewaert N, Lachmann R, Wada Y, Engel T
  Title
SLC37A4-CDG: Mislocalization of the glucose-6-phosphate transporter to the Golgi causes a new congenital disorder of glycosylation.
  Journal
Mol Genet Metab Rep 25:100636 (2020)
DOI:10.1016/j.ymgmr.2020.100636
Reference
PMID:32395830 (CDG2Y)
  Authors
Tambe MA, Ng BG, Shimada S, Wolfe LA, Adams DR, Gahl WA, Bamshad MJ, Nickerson DA, Malicdan MCV, Freeze HH
  Title
Mutations in GET4 disrupt the transmembrane domain recognition complex pathway.
  Journal
J Inherit Metab Dis 43:1037-1045 (2020)
DOI:10.1002/jimd.12249
Reference
PMID:35262690 (CDG2Z)
  Authors
Wilson MP, Durin Z, Unal O, Ng BG, Marrecau T, Keldermans L, Souche E, Rymen D, Gunduz M, Kose G, Sturiale L, Garozzo D, Freeze HH, Jaeken J, Foulquier F, Matthijs G
  Title
CAMLG-CDG: a novel congenital disorder of glycosylation linked to defective membrane trafficking.
  Journal
Hum Mol Genet 31:2571-2581 (2022)
DOI:10.1093/hmg/ddac055
Reference
PMID:34711829 (CDG2AA)
  Authors
Linders PTA, Gerretsen ECF, Ashikov A, Vals MA, de Boer R, Revelo NH, Arts R, Baerenfaenger M, Zijlstra F, Huijben K, Raymond K, Muru K, Fjodorova O, Pajusalu S, Ounap K, Ter Beest M, Lefeber D, van den Bogaart G
  Title
Congenital disorder of glycosylation caused by starting site-specific variant in syntaxin-5.
  Journal
Nat Commun 12:6227 (2021)
DOI:10.1038/s41467-021-26534-y
Reference
PMID:37711075 (CDG2BB)
  Authors
Duan R, Marafi D, Xia ZJ, Ng BG, Maroofian R, Sumya FT, Saad AK, Du H, Fatih JM, Hunter JV, Elbendary HM, Baig SM, Abdullah U, Ali Z, Efthymiou S, Murphy D, Mitani T, Withers MA, Jhangiani SN, Coban-Akdemir Z, Calame DG, Pehlivan D, Gibbs RA, Posey JE, Houlden H, Lupashin VV, Zaki MS, Freeze HH, Lupski JR
  Title
Biallelic missense variants in COG3 cause a congenital disorder of glycosylation with impairment of retrograde vesicular trafficking.
  Journal
J Inherit Metab Dis 46:1195-1205 (2023)
DOI:10.1002/jimd.12679
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