KEGG   Populus trichocarpa (black cottonwood): Poptr_cp030Help
Entry
Poptr_cp030       CDS       T01077                                 

Gene name
rbcL
Definition
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
  KO
K01601  
ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]
Organism
pop  Populus trichocarpa (black cottonwood)
Pathway
Glyoxylate and dicarboxylate metabolism
Carbon fixation in photosynthetic organisms
Metabolic pathways
Carbon metabolism
Module
Reductive pentose phosphate cycle (Calvin cycle)
Reductive pentose phosphate cycle, ribulose-5P => glyceraldehyde-3P
Photorespiration
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:pop00001]
 Metabolism
  Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    Poptr_cp030 (rbcL)
  Energy metabolism
   00710 Carbon fixation in photosynthetic organisms
    Poptr_cp030 (rbcL)
Enzymes [BR:pop01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.39  ribulose-bisphosphate carboxylase
     Poptr_cp030 (rbcL)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GeneID: 
NCBI-ProteinID: 
UniProt: 
LinkDB All DBs
Position
CP
AA seq 475 aa AA seqDB search
MSPQTETKAGVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
SSTGTWTTVWTDGLTSLDRYKGRCYDIEPVAGEENQFIAYVAYPLDLFEEGSVTNMFTSI
VGNVFGFKALRALRLEDLRIPPAYVKTFQGPPHGIQVERDKLNKYGRPLLGCTIKPKLGL
SAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALYKAQAETGEIKGHYL
NATAGTCEEMIKRAVFARELGVPIVMHDYLTGGFTANTSLAHYCRDNGLLLHIHRAMHAV
IDRQKNHGIHFRVLAKALRMSGGDHIHSGTVVGKLEGERDITLGFVDLLRDDFVEKDRSR
GIYFTQDWVSLPGVLPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGNAPGAVAN
RVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFQAMDTL
NT seq 1428 nt NT seq  +upstreamnt  +downstreamnt
atgtcaccacaaacagagactaaagcaggtgttggattcaaggctggtgttaaagattat
aaattgacttattatactcctgactatgaaaccaaagatactgatatcttggcagcattc
cgagtaactcctcaacctggagttccgcccgaggaagcaggggccgcagtagctgctgaa
tcttctactggtacatggacaactgtgtggaccgacgggcttaccagtcttgatcgttat
aagggacgatgctacgacatcgagcccgttgctggagaagaaaatcaatttattgcttat
gtagcttaccccttagacctttttgaagaaggttctgttactaacatgtttacttccatt
gtgggtaatgtatttgggttcaaagccctacgcgctctacgtctggaggatttgcgaatt
cctcctgcttatgttaaaacttttcaaggcccacctcatggtatccaagttgaaagagat
aaattgaacaagtatggtcgccccctattgggctgtactattaaacctaaattggggtta
tccgctaagaattacggtagagcagtttatgaatgtctacgcggtggacttgattttacc
aaagatgatgagaacgtgaactcccaaccatttatgcgttggagagatcgtttcttattt
tgtgccgaagcactttataaagcacaggctgaaaccggtgaaatcaaagggcattattta
aacgctactgcaggtacatgcgaagaaatgatcaaaagggctgtatttgccagagaattg
ggagttcctatcgtaatgcatgactacttaacagggggattcaccgcaaacactagtttg
gctcattattgccgagataatggtttacttcttcacatccatcgcgcaatgcatgcagtt
attgatagacagaaaaatcatggtatacactttcgtgtactagctaaggcattacgtatg
tctggtggagatcatattcactctggtaccgtagtaggtaaacttgaaggggaaagagac
ataactttgggttttgttgatttactgcgtgatgattttgttgaaaaagatcgaagccgc
ggtatttatttcactcaagattgggtctctctaccgggtgttctacccgtggcttcgggg
ggtattcacgtttggcatatgcctgctctgaccgagatctttggagatgattccgtacta
caattcggtggaggaactttagggcacccttggggaaatgcacccggtgccgttgctaat
cgagtagctctagaagcatgtgtacaagctcgtaatgagggacgtgatcttgctcgtgag
ggtaatgaaattatccgtgaagctagcaaatggagccctgaactagctgctgcttgtgaa
gtatggaaggagattaaatttgaattccaagcaatggatacgttgtaa

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