Astyanax mexicanus (Mexican tetra): 111188300
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Entry
111188300 CDS
T05042
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
111188300
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
111188300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_6
zf-RING_5
Y1_Tnp
U-box
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
111188300
NCBI-ProteinID:
XP_022517760
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MAEANVPLAQDEFSCSVCLDLLKNPVTINCGHSFCMVCINKCWDQEDQKKIYSCPHCRHT
FTSRPVVSKNTMLAEVVEKLKKTRLQAAPPDHSSADPEDVECDSCTGRKHKAVQSCLVCL
ASYCEAHLQPHYQSPAFKKHKLVKASRRLQEQICSQHDKLLEVYCRTDQQCICMLCTMDD
HRGHDTVSLAAERSEKQKQVVETQRKYKERIQEREKELQGLIEAVETHKRSAQTAVKDSE
KIFTEMILSIERRRSEVRQMIRDQEKAAVSRAVERLKRLKQEITELKRRDADLEKLSFTE
DHIHFLQSFQTLSAPPGSSASPAFTLSPLHTFEVVMKSVSQLRGKLDEFWKEEFEKTSAA
VKEVQIILPPEPKSREEFLQYSCQLTLDPNTAYKHLLLSERNTAVTDTNTDQAYPDRPDR
FDRHVQVLCRESVSGRCYWEVEWRGDRGVGIAVSYKSISRKGGGGECGFGFNDQSWKLLC
HSSKCIFRYNNRNTEISGVPVSSRIGVYVDHRAGTLSFYSISDTMTLIHRVQTTFTQPLY
AGFGFSRDSSVNLLLLS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagctaatgttccactggctcaggatgagttcagctgttcagtctgcctggat
ctcctgaagaatccagtgactattaactgtggacacagtttctgtatggtgtgtattaac
aagtgctgggatcaggaggatcagaagaagatctacagctgccctcactgcagacacacc
ttcacctcaagacctgtcgtgagtaaaaacaccatgctggctgaggtggtggagaaactg
aagaagacgagactccaggctgctcctcctgatcactcttctgctgatcctgaagatgtg
gagtgtgattcctgtactgggagaaaacacaaagccgtccagtcctgcctggtgtgtctg
gcctcttactgtgaagctcacctccagcctcactaccaatctccagcctttaagaagcac
aagctggtcaaagcctccagacgactccaggagcagatctgctctcagcacgataaactg
ctggaggtttactgtcgcaccgaccagcagtgtatctgcatgctgtgcaccatggatgac
catagaggacatgatacagtgtcacttgcagcagaaagatctgagaaacagaagcaggtg
gtggaaacacagaggaaatacaaggaaagaatacaggagagagagaaggagcttcagggg
ttaatagaggctgtggagactcacaagcgctctgctcagacagcagtgaaggacagtgag
aagatcttcactgagatgatcctctccattgagagaagacgctctgaggtgaggcagatg
atcagagatcaggagaaagctgcagtgagtcgagctgtagaacgtctgaagagactgaag
caggagatcacagagctgaagaggagagatgctgatctggagaagctttcattcacagag
gatcacatccatttcctccagagttttcagactctctcagctcctcctggatcttcagca
tcacctgcttttactctcagtcctctccacacttttgaagttgttatgaagtctgtttct
cagctgagaggaaaactagacgaattctggaaagaggaatttgagaagacatcagctgca
gtgaaggaagtgcagatcattcttcctcctgaacccaaaagcagagaagagttcctgcag
tattcctgtcagctcacactggacccaaacacagcttataaacacctcctcctgtctgag
aggaacacagcggtgactgacactaacacagatcaggcatatcctgaccgtccagacaga
tttgatagacatgttcaggttctgtgtagagagagtgtgagtggacgctgctactgggag
gttgagtggagaggagatagaggggttggtatagcagtgtcttataaaagcatctccagg
aagggaggaggcggggagtgtgggtttggatttaatgatcagtcttggaaattattatgt
cattcctccaaatgcatattcagatacaataacagaaatactgaaatctctggagtaccc
gtctcctctagaataggagtgtatgtggatcacagagcaggaactctgtccttctacagc
atctctgataccatgaccctcatccacagagtccagaccaccttcactcagccgctctac
gctgggtttgggtttagcagagactcctcagtaaatcttttactcttatcatag
DBGET
integrated database retrieval system
