Coccidioides posadasii: CPC735_008320
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Entry
CPC735_008320 CDS
T01332
Name
(RefSeq) DNA-directed RNA polymerase II largest subunit, putative
Organism
cpw
Coccidioides posadasii
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
9694287
NCBI-ProteinID:
XP_003068804
UniProt:
C5PA97
LinkDB
All DBs
Position
Unknown
AA seq
1690 aa
AA seq
DB search
MASFTRPVSSTISGVDFEVLSDNEIKSVSVKRIHNTPTLDSFNNPVPGGLYDPALGAWGD
HICTTCRLNAWSCAGHSGHIELPVHVYNVTFFDQLFRLLKAQCIYCHRFRMSKIQINTYV
CKLRLLQYGLVEEASTIGTMELRKGKHNKGDGESDSSEDEDEEDLIDRRNAYVQKCISGL
ASYKTRQNYMKMAKNPAAAEMRRNLVRDFLKDVANVKKCASCSGISPPYRRDRYSKIFRK
SLPQKAKAAMVAAGFQIPNPLVLMEEANRLSKKHKTIQNEDSVNGIIDDGNISVITETHG
AEQQVSMGNAVLAAVEDTESSEAGGQLDDSQQYIPSSEVYASVRFLFEKEQEILDLVYDS
RPGSGRRSHVNADMFFIKNLLVPPNKYRPAAQQGPGQIMEAQQNTSFTRILKLCDQINQI
SRERQGDNGESISRIRSYRDLLHAIVQLQDAVNSLIDRDRNPAQGAAGIQNEDGIKQRLE
KKDGLFRKNMMGKRVNFAARSVISPDPNIETNEIGIPLVFAKKLTYPEPVTNHNYWELKQ
AVINGPDIYPGAAAVENELGQVVNLKFKSVDERIAIANMLLSPSNWKLKRSRNKKVYRHL
TTGDVVLMNRQPTLHKPSIMGHRARVLTGERTIRMHYANCNTYNADFDGDEMNLHFPQNE
IARAEAMQLADTDHQYLVATSGKPLRGLIQDHISMGTWFTSRDSLFDEEDYHQLLYSCLR
PENSHTVSEKIELMPPTILKPKPRWTGKQIISTILKNITPENRAGLNLIGKSSTPGDRWE
IGSEEGKVIVKDGELLCGILDKAQLGPSAGGLIHSVHEVFGHVVAGKLIGILGRLLTRFL
QMRAFTCGMDDLRLTKKGDEERKKQLKRGDNLGHEVALQYVTLDESPVEDKETELQRRLE
DVLRDDEKQAGLDSMFNSRTAGLSSDITAACLPSGLEKPFPWNQMQAMTVSGAKGSVVNA
NLISCNLGQQVLEGRRVPVMISGKTLPSFKPFETKLVAGGYVSGRFLTGIKPQEYYFHAM
AGREGLIDTAVKTSRSGYLQRCLIKGMEGLKAEYDNSVRDTTDGTLVQFLYGEDGLDITK
QKHLQDFSFLAQNYLSILSQVNGMDEFNKVHSEVAAKWNKSAIKKVKRTGQVDAKDPVLA
HYHPGANFGSTSESFATALKEYEKKNPDKLLKDKGQGIDGISKKDFEHIMNMKYMRSVVD
PGEAVGIVAGQSIGEPSTQMTLNTFHLAGHSAKNVTLGIPRLREIVMTASTQILTPTMSA
NFYEQVSTKDRELFAKGISRLTLAEVVDKLSVHERISNRGNVKAKVYDIHINFFPAEEYT
QEYAIKVQDVLETLEKRFVPKLVKLTRAELKKRTSEKSLSDFSAAQPEIGASVGVVEEGP
RNTEGREAANDDDEDEDQDDAKRARSSQNRSNQVSYEAPDEDDQDIIRRQDSSELDSEDE
DESSENKEKRPASGDEDVEMKDASDVEDEDKEREESIRDKHAEVTRFKFDPKKGTSCIIQ
LQYDVSTPKLLLLPLVENATRAAVIQFIPGLGSCTYVPEERDTPAHILTDGVNLLAMRDY
QHIINMHTLYSNSIHHMLTLYGVEAARASIVREMDSVFKSHSIAVDNRHLNLIGDVMTQS
GGFRPFNRMGIVKDSTSPFMKMSFETTVRFLRDAVLERDWDNLAAPSSRIVMGRVSTVGT
GSFDVLAPVG
NT seq
5073 nt
NT seq
+upstream
nt +downstream
nt
atggcgagctttactcgacccgtatcttccacaatcagtggagtggatttcgaagtcctt
tccgataacgaaatcaaatcggtatcagtgaagcgcatacacaatacgcccactctcgat
tcgttcaataaccccgtccctggaggtctatatgacccggctcttggtgcatggggtgat
catatatgcacaacatgtcgattgaatgcatggtcttgcgctggccactcaggccacatt
gagctgccggttcacgtttataatgttacattttttgatcagctctttcggctcttaaaa
gctcagtgcatttactgccaccgattccgaatgtcgaagatccagataaatacatacgtt
tgcaaattgcggcttttgcagtatggtttggtggaagaggcttcgacgattgggacaatg
gagctccgaaagggcaaacataataaaggggatggcgagtctgacagcagtgaggacgag
gacgaagaagatcttattgatcgccggaatgcctatgtccaaaaatgcatctccggtctt
gcgtcttataagacgagacagaactatatgaaaatggcaaaaaatccggcagcggcagaa
atgaggagaaatttagtgcgcgacttcctaaaagatgttgcaaatgtcaaaaaatgcgct
tcttgtagtggcatttctcctccatatcgaagagataggtactcaaaaatcttccgtaaa
tctttgccgcaaaaagccaaagctgccatggttgccgctggctttcagattccgaacccc
ctcgttttgatggaggaggccaaccgtctctccaaaaagcacaaaacgatacaaaacgag
gacagtgtcaatggaattattgatgatggcaatatcagtgttatcactgagacacatggc
gctgagcaacaagtgtcaatgggaaatgcagttttagcagcagtcgaggacacggaatcg
tcggaagccggtggtcaactagacgattctcagcagtacataccatcatcggaagtctat
gcatctgtgcgatttttatttgagaaagagcaggagatattggatttggtctatgattca
aggcccggctcagggcggcggtctcatgtgaacgccgatatgttttttatcaaaaaccta
ctcgtgccccccaacaagtaccgcccggccgcacagcaaggtcctggtcaaattatggaa
gcccagcaaaatacttccttcactcgaattttaaaactatgcgatcaaatcaaccaaatc
agccgagagaggcagggtgacaatggtgaatcgatatcacggattcgaagttatcgtgat
ctcctccacgcaattgtacagttgcaagatgctgtcaatagtttaattgaccgtgacaga
aatcctgcgcaaggagcagcaggtattcagaatgaggacggtatcaagcaaaggctagaa
aagaaggacggcctgttcagaaagaacatgatgggaaaacgtgtcaactttgcagcccga
agcgtcatatcccccgatccaaatatcgaaacgaacgaaattggaattcctcttgtcttt
gccaaaaagcttacctatccagagccggtgacgaatcacaattactgggagctcaagcaa
gcggtgatcaatggtccagatatctatcctggtgctgcagctgtcgaaaatgaactcgga
caggttgtcaatttgaaattcaagtctgtcgatgaacgtattgcaattgcaaatatgctt
ctatctccatcaaattggaaattgaaacgatcgaggaataagaaagtctatcgacaccta
acaactggagatgtagtgctgatgaaccgacagccaacactgcataaaccatccataatg
ggacatcgtgctagagtattaactggagaaaggacaattcgaatgcactacgccaattgc
aacacatataatgcagactttgacggtgacgaaatgaacttgcatttccctcaaaatgag
attgcacgagctgaggccatgcaactggctgatacagaccatcaatatcttgtcgcaact
tccggaaagcctctccgtggcctaatccaagatcatatttccatgggaacttggttcaca
tctcgggacagtctttttgacgaggaagattaccaccagcttctttatagctgtctgcgg
ccagagaactcgcacacagttagcgagaagattgaacttatgccacctaccattcttaag
cctaaaccaagatggaccgggaagcagattatctctaccattttaaaaaatattactccc
gaaaatcgagctggtttgaatctaataggcaagtcctccacgccaggagacagatgggag
ataggctctgaagaaggcaaagttatcgtcaaagacggagagctactgtgtggtatattg
gacaaggcccagcttgggcctagcgccggtggtcttatccactcggttcatgaggttttt
gggcatgttgttgccgggaagctcatcggtattctgggacgactgcttactaggttcttg
caaatgcgcgcctttacttgtggcatggatgatcttcggctgaccaagaagggcgatgaa
gagcgtaaaaagcaactgaagaggggtgacaatcttggccacgaggttgccctccagtat
gttaccctcgacgagagccccgttgaggataaagagaccgagttgcaaaggcgactggaa
gatgtacttcgggacgatgaaaagcaagctggcttggatagcatgttcaactccagaaca
gctggactttcatccgatatcacggctgcttgcttgccttctggccttgaaaagcctttc
ccatggaatcaaatgcaagccatgacggtgtctggtgctaaaggttcagtggttaatgca
aacttgatttcctgcaatttgggtcaacaggtgctggaaggccgtagagtgccagttatg
attagtgggaagaccttgccatccttcaaaccgtttgaaaccaagcttgtggccggtggt
tatgtctctggtcgtttccttactggaatcaagcctcaagagtattatttccacgccatg
gccggacgagaaggacttatcgacactgcggttaagacctctagatccgggtacctccag
cgctgtttgatcaagggaatggaaggtttgaaagcagagtacgataactcagtgcgggat
actacggacggaactcttgtgcaattcctttacggagaagacggtttggatatcacgaag
caaaagcatcttcaagatttcagtttcttagctcagaactatttgtccatcctttcacaa
gttaatggcatggacgagttcaacaaagtccatagcgaagttgctgccaagtggaacaag
agcgccatcaaaaaggttaaaaggactgggcaagtggatgctaaggacccagtcctggct
cattatcatccaggagctaatttcggaagcacatctgaatcttttgctactgcccttaaa
gagtacgagaagaagaatcccgacaagcttttaaaagacaagggccaaggaatcgatggc
atctctaaaaaggactttgaacatatcatgaacatgaaatatatgcgttcggtggtggat
cctggtgaagccgttggaattgttgccgggcagtctattggagagccatctactcaaatg
acgctgaatactttccatttggctggtcactccgcgaaaaacgtcacgcttggtattcct
cgacttagggaaattgtcatgacggctagtactcagatcctaaccccgactatgtctgcc
aatttttatgagcaagtttccaccaaagatcgggagctatttgccaaaggcattagcaga
cttactcttgccgaggttgttgataaactctcggtccatgagcggatatccaaccggggt
aacgtgaaagcgaaagtttatgatatccatattaacttcttccctgctgaagagtatacc
caagagtacgctatcaaagttcaagatgtgcttgaaacattggaaaaacgattcgttccg
aaacttgtcaagctaacaagggcggaactcaagaaacgaacaagcgagaagtccctctct
gatttctctgctgctcagccagaaattggagcttctgtcggagtcgtcgaagaaggccca
cgaaatactgaaggaagagaggccgccaatgacgatgatgaagatgaagatcaagacgat
gcgaagagagcaagatcgtcgcaaaacaggtcgaaccaagtttcatatgaagcccctgat
gaagatgaccaagacatcattcggcgccaagatagctcagagctagactccgaagatgaa
gatgagagcagcgaaaacaaggagaagagaccggcatcaggtgatgaagacgtcgagatg
aaagacgcttctgatgtggaagatgaggacaaggaacgcgaggaatcgatccgagacaaa
catgctgaagtcactcgattcaaattcgatcccaagaaaggcacgtcgtgcattatccaa
cttcagtatgacgtctcaacgcccaagctccttctgctgcctcttgtagagaacgccact
cgcgcagccgttatccaattcatccccggccttggcagctgcacatacgtgcccgaagaa
agagatacaccggcccacatacttactgacggtgtcaatctcctcgctatgcgcgattat
cagcacattatcaacatgcacaccctgtacagcaattccattcaccacatgcttacactc
tatggtgttgaggcagcgcgtgcaagcattgttcgcgaaatggactccgttttcaagagc
cacagcattgccgtggataaccgccatctgaacctcattggcgacgtgatgactcagagt
ggaggattccgcccattcaaccgtatgggcattgtgaaagacagtacatcaccgtttatg
aagatgagtttcgaaactactgtacgattcttaagggatgcagtcctagagcgtgactgg
gacaatcttgctgcacctagtagcaggattgtcatgggaagagtgagcactgttggtact
gggtcttttgacgttcttgcgccagttggataa
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integrated database retrieval system
