Oryza sativa japonica (Japanese rice) (RAPDB): Os04t0481700-01
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Entry
Os04t0481700-01 CDS
T02163
Symbol
Os04g0481700
Name
(RAP-DB) Similar to MDR-like ABC transporter.
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
dosa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Os04t0481700-01 (Os04g0481700)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
dosa02000
]
Os04t0481700-01 (Os04g0481700)
04147 Exosome [BR:
dosa04147
]
Os04t0481700-01 (Os04g0481700)
04090 CD molecules [BR:
dosa04090
]
Os04t0481700-01 (Os04g0481700)
Enzymes [BR:
dosa01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
Os04t0481700-01 (Os04g0481700)
Transporters [BR:
dosa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
Os04t0481700-01 (Os04g0481700)
Exosome [BR:
dosa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Os04t0481700-01 (Os04g0481700)
CD molecules [BR:
dosa04090
]
Proteins
Os04t0481700-01 (Os04g0481700)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_21
Zeta_toxin
AAA_29
AAA_22
RsgA_GTPase
AAA_5
APS_kinase
Cytidylate_kin
ABC_ATPase
AAA_33
nSTAND1
AAA_30
AAA_15
Motif
Other DBs
RAP-DB:
Os04t0481700-01
LinkDB
All DBs
Position
chr04:24096161..24098173
AA seq
670 aa
AA seq
DB search
MVHLQKAPPVAAREERHRAVDVVESEMVSFRSVEIMSAVSATEHRPSPAPSFCSVEHSTE
IGRKLVDHGVARSRKPSKLRLLKMNRPEWKQALLGCVGAVVFGAVLPLYSYSLGSLPEVY
FLADDGQIRSKTRLYYFLFLGIAVVCITANIVQHYNFAVMGERLTERVRGQMLAKILSFE
VGWFDEDENSSAAVCARLATQSSKVRSLVGDRMCLLVQAGATASLGFSLALAVSWRLATV
MMAMQPLIIASFYFKKVLMAAMSKKAKKAQVQGSQLASEAVVNHRTITAFSSQRRMLRLY
EAAQQGPKKDNVAHSWFSGFCLCLCQFSNTGSMAVALWYGGKLMAKGLITPTHLFQVFFM
LMTMGRVIADAGSLTSDLAQGGDAVRSVLDTLDREPTIKDDDNDNERKKKKRKEIKGAIE
FKNVHFSYPTRPEVAVLAGFSLEIGAGKTVALVGPSGSGKSTVIGLIERFYDAQRGSVLV
DGEDIRSYSLARLRSQVALVSQEPTLFSGTIRDNIAYGAAEEHATEDEVARAAALANAHG
FISAMERGYDTRVGERGAQLSGGQRQRIALARAVLKDARILLLDEATSALDAASERLVQD
AVDRMLRGRTCVVVAHRLSTVEKSDTIAVVKDGRVAERGRHHELLAVGRAGTYYNLIKLQ
HGRSPCLSPM
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggtgcacctgcagaaggcgccacccgtggcggcgagggaggagcgccaccgcgccgtg
gatgtggtggagagcgagatggtgtcgttccgcagcgtggagattatgtcggcggtcagc
gccaccgagcaccgtcctagccccgcgccgtcgttctgctcggtcgaacactcgacggag
attgggaggaagctcgtggaccacggtgtggcgcgctccaggaagccctcgaagcttcgc
ctgctgaagatgaaccggccggagtggaagcaggcgttgcttgggtgcgttggcgccgtc
gtcttcggcgcggtgctgccgctgtactcgtacagcctaggctcgttgccggaggtttat
ttcctcgccgacgatggccagatccgttccaagaccaggttgtactacttcctcttcctt
ggcatcgccgtcgtctgcatcacggcgaacatcgtgcagcactacaacttcgcggtgatg
ggcgagcgcctgacggagcgtgtccggggccagatgctcgccaagatcctctccttcgag
gtcgggtggttcgacgaggacgagaactcgagcgccgcggtgtgcgcgcggctggcgaca
cagtcgagcaaggtccgctccctcgtcggcgaccgcatgtgcctgctggtccaggcgggc
gccacggcgtcgctgggcttctcgctcgcgctcgccgtgtcgtggcgcctcgccacggtg
atgatggccatgcagccgctgatcatcgcgagcttctacttcaagaaggtgctcatggct
gccatgtccaagaaggccaagaaggcgcaggtgcaggggagccagctcgccagcgaggcc
gtggtgaaccaccggacgatcaccgcgttctcgtcgcagcggcggatgctccgcctgtac
gaggccgcgcaacaaggccccaagaaggacaacgtggcgcactcgtggttctccggcttc
tgcctgtgcctgtgccagttcagcaacaccggcagcatggcggtcgctctctggtacgga
ggcaagctcatggccaaggggctcatcactcccacgcacctgttccaggtgttcttcatg
ctcatgaccatgggaagggtcatcgccgacgccgggagcttgacgtcggacttggcgcaa
ggcggcgacgcggtgcgctccgtcctcgacacgctggaccgtgaaccgacgatcaaggac
gacgacaacgacaacgagaggaagaagaagaaacggaaggagataaaaggcgcgatcgag
ttcaagaacgtgcacttcagctacccgacgcggccggaggtggccgtgctcgccggattc
agcctcgagatcggcgcggggaagacggtggcgctcgtcgggccgagcgggtccggcaag
tcgacggtgatcgggctgatcgagcggttctacgacgcgcagaggggctcggtcctggtc
gacggcgaggacatcaggagctacagccttgcacgcctccggtcgcaggtggcgctcgtc
agccaggagccgacgctcttctccgggacgatacgcgacaacatagcgtacggcgccgcc
gaagagcacgccaccgaggacgaggtggcccgcgccgcggcgctcgccaacgcccacggg
ttcatcagcgccatggagcgcgggtacgacacgcgcgtcggggagcgcggcgcgcagctg
tcgggggggcagaggcagcggatcgcgctggcgcgggcggtgctgaaggacgcgaggatc
ctgctgctggacgaggcgacaagcgcgctggacgccgcgtcggagaggctggtgcaggac
gccgtggaccggatgctgcgggggaggacgtgcgtcgtggtggcgcaccgcctctcgacg
gtggagaagtccgacacgatcgcggtggtgaaggacgggagggtggcggagagagggagg
caccacgagctcctcgccgtcggccgcgccgggacgtactacaacctgatcaagctccag
cacggcagatcgccgtgccttagtcccatgtga
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integrated database retrieval system
