KEGG   Oryza sativa japonica (Japanese rice) (RAPDB): Os06t0248200-01
Entry
Os06t0248200-01   CDS       T02163                                 
Symbol
Os06g0248200
Name
(RAP-DB) Hypothetical conserved gene.
  KO
K14407  cleavage stimulation factor subunit 2
Organism
dosa  Oryza sativa japonica (Japanese rice) (RAPDB)
Pathway
dosa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:dosa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    Os06t0248200-01 (Os06g0248200)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dosa03019]
    Os06t0248200-01 (Os06g0248200)
Messenger RNA biogenesis [BR:dosa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     Os06t0248200-01 (Os06g0248200)
    U7-dependent histone pre-mRNA processing factors
     Os06t0248200-01 (Os06g0248200)
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
RAP-DB: Os06t0248200-01
LinkDB
Position
chr06:join(7693213..7693464,7693648..7693890)
AA seq 164 aa
MAVPLPEPAAAMADVNCRCSRVVYVGNIAFHATEAELRDACELIGPVRSLRLAALDPATN
KRKGYAFVEYADDETARSALRNLHSRQEVREMVAALEATEQLKIPGLGTAMEQAQRLLEM
FAADEEEVARKKLKRASDEEHAKQSKVVGVDGVVKASSRIVPCF
NT seq 495 nt   +upstreamnt  +downstreamnt
atggctgtgccactgcccgagcccgctgccgccatggccgacgtgaactgccgctgcagc
cgcgtcgtctacgtcggcaacatcgccttccacgccaccgaggccgagctccgcgacgcc
tgcgagctcatcggccccgtccgctccctccgcctcgccgccctcgacccggccaccaac
aagcgcaagggctacgccttcgtcgagtacgccgacgacgagacggcccgcagcgccctc
cgcaacctccactcgaggcaggaggtgcgggagatggtggccgcgctggaggccaccgag
cagctgaagattcccgggctgggcaccgccatggagcaggcgcagcggctgctggagatg
ttcgccgccgacgaggaggaggtggccaggaagaagctgaagcgcgcgagcgatgaagag
cacgcgaagcagagcaaggtggtcggggttgatggcgtcgtcaaggcttcttcacgcatc
gtcccctgcttctga

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