Oryza sativa japonica (Japanese rice) (RAPDB): Os07t0456700-01
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Entry
Os07t0456700-01 CDS
T02163
Symbol
Os07g0456700
Name
(RAP-DB) Similar to (1,4)-beta-xylan endohydrolase (EC 3.2.1.8).
Organism
dosa
Oryza sativa japonica (Japanese rice) (RAPDB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CBM_4_9
Glyco_hydro_10
bpX6
Motif
Other DBs
RAP-DB:
Os07t0456700-01
LinkDB
All DBs
Position
chr07:join(15884681..15884788,15885342..15885706,15885782..15885923,15886271..15886635,15886713..15886872,15887278..15887615,15887717..15887894,15888033..15888566,15888755..15889870)
AA seq
1101 aa
AA seq
DB search
MRRRWGCLSSLCRPRRGGRAAAAPLPQPDPPRLESKEVEEHGASDKVVMENILSNNDFSE
GLHLWHPNGCHGFVAVEGSGYHHGIRPHSGSNYAVLTRRTHNWQGLEQDITEKVTVGTEY
IVAAHVRVHGELNEPVGIQATLKLEGDGSSTNYQSVARISASKDCWEKLEGSFELKTLPR
RLVFYIEGPPPGVDLLIDSVTISYKKTERAASKLVSGTENIISNYDFSEGLHLWNPICCH
AYVASQWSGFLDGIRGSSGENYAVVSKRTESWQGLEQDITDKVSAGTAYAVSAYVRVDGN
IHTKVEVKATLRLHNTDDSTHYSPVGSLLASKEKWEKMEGSFCLTNMPKRVVFYLEGPPA
GVDLIIDSVNVTCSGYQQLKEVKVPSGVDTIVKNPHFDEGLNNWSGRGCNICRHELTAYG
NVKPLNGSYFASATGRVHNWNGIQQDITGRVQRKVLYEISSAVRIFGSANDTEVCVTLWV
QEYGRERYVSLAKNPASDKQWTHLKGKFLLHAPFSKAVIFVEGPPAGIDILVDGLVLSPA
RKLHAAPRPRIENVSYGANVIHNSAFSHGLSGWSPMGSCRLSIHTESPHMLSAILKDPSA
KQHIRGSYILATNRTDVWMGPSQLITDKLRLHTTYRVSAWVRAGSGGHGRYHVNVCLAVD
HQWVNGGQVEADGDQWYELKGAFKLEKKPSKVTAYVQGPPPGVDLRVMGFQIYAVDRKAR
FEYLKEKTDKVRKRDVILKFQGSDAANLFGSSIKIQQTENSFPFGSCIGRSNIENEDLAD
FFMKNFNWAVFENELKWYWTEAEQGRLNYKDSDELLEFCRKHNIQVRGHCLFWEVEDSVQ
PWIRSLHGHHLMAAIQNRLQSLLSRYKGQFKHHDVNNEMLHGSFYQDRLGNDIRAHMFRE
AHKLDPSAVLFVNDYNVEDRCDSKSTPEKLIEQIVDLQERGAPVGGIGLQGHITHPVGDI
ICDSLDKLSILGLPIWITELDVTAENEHIRADDLEVYLREAFAHPSVEGIILWGFWELFM
FREHAHLVDVDGTINEAGKRYIALKQEWLTSITGNVDHHGELKFRGYHGSYTVEVATPSG
KVTRSFVVDKDNAVQVVTLNI
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgaggaggcgctgggggtgcctctcctccctgtgccgccctcgccggggtggacgcgcg
gcggcggccccgctcccgcagccagatccaccgcgtctcgagtccaaggaagtagaggag
cacggcgcttccgataaagttgtcatggagaacattctgtcaaacaatgatttttcggaa
ggtctacatttgtggcatcctaatggttgccatggatttgtggctgttgaaggatcaggt
tatcatcatggaataaggcctcactcagggtcaaattatgccgtacttactcgtcgcaca
cataattggcaagggcttgagcaggacataacagaaaaggtcactgttggtactgagtac
attgttgctgcccatgtcagagtccatggtgaactcaatgagcctgttggaattcaggcc
actctaaaacttgagggcgatggttcttctacgaactatcaatcagttgcaaggatctca
gcatcaaaagactgttgggagaagttggaaggttcatttgaactaaaaactctaccaaga
cgtttggtattctacattgaaggcccccctcctggtgtagacttgctcatagattcagtc
accatctcctacaagaaaacagagcgggctgcatccaaactggttagtggaacagaaaac
atcatttcaaattatgatttttcggaaggccttcatttgtggaaccctatctgctgtcat
gcatatgtggcatctcaatggtctggtttccttgatggtattagagggagctcaggagaa
aattatgctgtagtttcgaagagaactgaaagctggcaaggtcttgaacaagatattaca
gataaagtatctgctggtactgcttatgcagtatcagcctatgttagagttgatgggaat
atccatacgaaagttgaagttaaagcaaccttgaggttgcataacacagatgattcaacg
cactacagtccagttggaagcctgttagcttcaaaagaaaagtgggagaagatggaagga
tccttttgcttgacaaatatgccaaaacgtgtagtattctacctggaaggacctcctgct
ggcgtggaccttatcattgattccgtaaatgtaacttgctctggatatcagcagttaaaa
gaagtaaaagtaccaagtggagttgataccatcgttaagaatcctcactttgacgaaggg
ttaaacaattggtctggaagaggatgcaatatctgtaggcatgagcttactgcttatgga
aatgtcaagcctctaaatggcagctattttgcttcagccactggacgggtccacaattgg
aacggtatccagcaagatatcactggcagggtacagagaaaagttctttatgagataagt
tctgctgtccgcatatttgggagtgccaatgatacagaagtctgcgttactctgtgggta
caagaatatggccgtgagcgatatgtaagccttgcaaagaacccggcatctgataagcaa
tggacacatctaaaaggaaagttcctcctccatgccccgttttcaaaagctgttattttc
gtagaggggccacctgcaggcattgatattcttgttgatggccttgtcctatctccagca
agaaaactccatgctgcaccccgcccaagaattgagaatgtttcatatggagctaatgta
atacataacagtgctttcagtcatgggctttctgggtggagtcccatggggtcatgtcga
ttgagtatccatactgaatcaccccatatgctttctgccatcttgaaggacccctcagct
aagcaacatataagaggttcttatattcttgccacaaaccgcactgatgtgtggatgggc
ccttcccagttgataactgacaagcttaggctgcacaccacttacagagtttctgcttgg
gtacgtgctgggtctggaggacatggacgttaccatgtaaatgtttgtcttgctgtagat
catcagtgggttaatggtgggcaagtagaagctgatggcgatcaatggtatgaactcaaa
ggagcattcaagcttgaaaagaagccatccaaagttactgcatatgttcagggaccgcct
ccaggtgttgatctcagagttatggggttccaaatttatgctgttgatagaaaagcacgt
tttgaatatctgaaggagaaaactgacaaggtaaggaagcgtgatgtcatcctgaagttc
cagggatcagatgctgcaaacctttttggttcatctatcaagatacaacagaccgagaac
agttttccatttggatcatgcatagggagaagtaacattgagaatgaggatcttgctgat
ttcttcatgaagaactttaattgggctgtatttgaaaatgaactgaagtggtactggaca
gaggctgaacaagggagactaaattataaagattctgatgagttgcttgaattttgccgg
aaacataacattcaagttcgtggtcactgcttattctgggaagtagaagattcagtccag
ccatggattcgatcattacatggtcaccacctgatggctgctatacagaatcgtttgcaa
agtctgttgtcaaggtacaaaggtcagtttaaacatcatgatgtaaacaacgagatgctt
catgggtctttctaccaagatagactgggaaatgatattagagctcacatgtttagggaa
gcacataaacttgacccttcagcagtactctttgtgaacgactacaatgttgaagatcga
tgcgactcaaaatctacaccagaaaaattaattgaacagattgttgatctccaagaaagg
ggtgctccagttggtgggattggcttgcaaggtcatatcacgcatccagtgggtgacatc
atctgcgattccctggacaagctctccatactgggtctccctatctggatcaccgaattg
gatgtcacggctgagaatgaacacatccgagccgatgatctggaggtgtaccttcgcgaa
gcctttgcgcatccttccgtggaggggattatcctttggggattctgggagctgttcatg
ttccgagaacacgctcacctggttgatgttgatggaacgatcaatgaggctggcaaaagg
tacattgcactgaagcaagagtggctaaccagcattactggcaacgtggatcaccatgga
gagttgaagttcagaggctaccatgggtcatacacggtagaagtagcaacgccttcagga
aaggtaaccagatcgtttgttgttgacaaggataacgctgttcaggtggttaccctgaac
atttag
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integrated database retrieval system