Musa acuminata (wild Malaysian banana): 104000691
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Entry
104000691 CDS
T03447
Name
(RefSeq) probable ubiquitin conjugation factor E4
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
mus
Musa acuminata (wild Malaysian banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
104000691
04120 Ubiquitin mediated proteolysis
104000691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
104000691
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104000691
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
U-box type E3
104000691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF1184
Motif
Other DBs
NCBI-GeneID:
104000691
NCBI-ProteinID:
XP_009421070
UniProt:
A0A804KV87
LinkDB
All DBs
Position
10:complement(21041076..21050730)
Genome browser
AA seq
1025 aa
AA seq
DB search
MATKKPQRSAAEIEDIILRKIFLVSFAEPAKNEPKVVYLELTAAEILSEGRPLVLSRDTM
ERVLIDRLSGDFPAVDPPFPYLVGCYRRACEESKKVASMKDPSVRSEIESAIKQARRLIA
SYCRIHVGNPEMFMPTGQAGASATSELLSMIFSEVSTPMDGFAGNSLGGGLSCPPGFIEE
FFRDGDEESLEPVLNDLFEKLRQSVAKVSALGNFQQPLRALLLLVSFPKCAKALVNHPRW
IPKETYLLIGEGRMIEIASILGAFLHVSALPDHKEFKSIPDVGQQCFSESSNRRPADLLS
SFTTIKTVMNILYDGMGEVSLTLLKNVDTRERVLEYLAEVIKRNSSRSGMQVDPFSCASS
GMFVNLSSVMLRLCEPFLDGTATKREKIDPKYLFYNSRLDFRQLTSMHASSEEVTAWIEN
ENHGKTDKDLESQEATSSGSNSGTSILQVKPLKSCTKKEKYSFICECFFMTARVLNLGLM
KAISDFKHLAQELARCEEDLSSFKAMREQGASPQLEADIKRLEKVIEILSQDRLCYEAQI
LRDGALLQRALSFYRLVIIWLVDLVGGFKMPLPSTCPMEFACIPEHFVDDAMDLLILTSR
IPKALEGFVLDDFLNFIIMFMASPTYIKNPYLRAKMVEVLNCWMQQRSSSSGFSASASLF
EGHQLSLDYLVRNLLKLYVDIEFTGSHTQFFDKFTIRHNIAELLEYLWDVPSHRNAWRQI
AREEEKGVYLNFLNFLINDSIYLLDESLNKILELKEIEAEMANSAEWERRPAQEREERMR
LFHSRENIVRFDMRLANEDVGMLAFTSEQIPAPFLLPEMVERVASMLNYFLLQLAGPQRR
SLSVKDPEKYEFKPKQLLKQIAKIYVHIARGDKDNIFPAAISKDGRSYNEKLFASAADIL
WKIGEDGRVIEEFIRLGLKAKAAASEAMDAENNLGEIPEEFMDPIQYELMKDPVILPSSR
VTVDRVVIQRHLLSDNTDPFNRSHLTQDMLIPDTELKQRIDEFIRSRRGGHDAVKPSNDV
TDMVE
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaagaagccccagcgatccgcggcggagatcgaggacatcatcctccgcaag
atcttcctcgtctccttcgctgaacctgccaagaacgagcctaaagtcgtctacctggag
cttacggcagccgagatccttagcgagggcagacccctcgttttgtctcgcgatacgatg
gagagggtccttatcgatcggctttccggtgacttccccgctgtcgacccccccttcccc
tacctggtcgggtgctaccgccgtgcatgcgaggaatccaagaaggtcgcctcgatgaag
gacccctctgtccgatcggagatcgagtccgctatcaagcaagctcggagattgatcgcc
tcttattgtaggatccacgtggggaatcccgagatgtttatgcccacgggacaggctggt
gcttcggctacgtcggaactgttgtcgatgatcttctcggaagtttcgacgccgatggat
gggttcgcaggcaatagcttaggtggcggattaagttgcccgcctggttttatcgaggag
ttctttagggatggtgatgaggagagcttggagcctgttctgaacgatttgtttgagaaa
ttgaggcagagtgttgccaaagtatcggcattaggcaactttcagcagccattgagagcg
ctgctgctgctggttagctttcctaaatgcgcaaaggctttggtgaatcaccccaggtgg
atcccgaaagagacttacctgttgatcggggagggtaggatgattgagattgcaagtatt
ttgggtgcttttcttcatgttagtgcattgccagatcataaggagtttaagagcatacct
gatgttggacagcaatgcttttcagaatcatcaaatcggcgccccgctgatctgttgtct
tcttttacaacaatcaaaacagtaatgaacattttgtatgatggtatgggagaggtttcc
cttaccttacttaaaaatgtggatacacgagaaagggttctagagtatcttgccgaggtg
atcaagagaaactcatcaagatctggcatgcaggttgatccattttcttgtgcaagctct
ggcatgtttgtgaaccttagttcagtaatgcttcgcctttgtgaaccttttttggatgga
acagcaacaaagagagagaaaattgatccaaaatatttattttataatagtcgattggac
ttcagacaattgacgtctatgcatgcatcatccgaagaagtcacagcatggatagagaat
gaaaatcatgggaagactgacaaagatttggagtctcaagaagccacaagctctggttct
aatagtgggacttccatccttcaggttaaaccattaaaaagttgtacaaaaaaggagaag
tattcatttatttgtgagtgcttctttatgactgcaagagtacttaaccttgggctcatg
aaagcaatatctgacttcaaacatcttgctcaggagttggcaagatgtgaagaagatttg
tcttcatttaaagccatgagggaacaaggagcttctccacaacttgaggctgatataaaa
cgtttggagaaagtaattgagatattatcacaggacaggctttgctatgaagctcagatt
ctacgagatggtgcactacttcaacgtgcattatctttctacagactggttattatctgg
ttggtggatcttgttggtggatttaaaatgcctttgccatcaacttgccctatggaattt
gcatgcattccagagcattttgtggatgatgccatggacttgcttattttaacttctcga
atcccaaaggctttggaagggtttgtgttggatgatttcttgaacttcattataatgttc
atggcgagtcctacttacatcaaaaacccttatttgagagcaaaaatggttgaagttctg
aattgttggatgcaacaaagaagttcttccagtggattttctgctagtgcttctctcttt
gagggtcaccaattatctcttgactatctagtcagaaatcttctgaaactttatgtggat
attgaattcactggttcacatacacagttttttgataaattcacaattcgccacaatatt
gctgaacttctagagtatctctgggatgttcctagccatcgcaatgcatggagacagatt
gctagggaagaggagaagggagtgtatttgaactttttgaatttccttatcaatgatagc
atctatcttcttgatgagagtttaaataaaattcttgaactcaaagaaatagaagcagaa
atggcgaattctgcagaatgggagcggagaccagcacaggagagggaagagaggatgcgg
ctatttcattcacgagaaaatattgttcgttttgatatgaggttggcaaatgaagatgtt
gggatgcttgcgttcacatctgaacagatacctgcaccattcctgcttccagaaatggtt
gaaagggtggctagcatgctaaattactttctcttgcaacttgctggccctcaacggaga
tctcttagtgtaaaagatccagaaaagtatgaatttaaaccgaaacaattgctaaagcaa
atcgccaagatttatgttcatattgcaagaggtgacaaagacaatatattccctgctgca
atctcaaaggatggacgatcatataatgagaagctgtttgcttctgcggctgatattttg
tggaaaattggtgaagatggaagggtaattgaggaattcattcgacttggtcttaaagcc
aaagcagcagcttctgaagcaatggatgcggagaataatcttggggaaatacccgaggaa
tttatggaccctattcagtacgaattgatgaaagatccagtgattctaccttcatcaagg
gtaacagtggatcgggttgttatccaaagacacctactaagtgacaatacggacccattc
aatcgttcacatctcactcaagacatgttgatacccgacacagagctgaaacaaagaatt
gatgagttcatcagatcccgccgcggagggcatgatgctgtcaagccatctaatgacgtt
acggatatggtcgagtaa
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integrated database retrieval system
