Schizosaccharomyces pombe (fission yeast): SPAC823.08c
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Entry
SPAC823.08c CDS
T00076
Name
(RefSeq) putative ATP-dependent RNA helicase Rrp3
KO
K14777
ATP-dependent RNA helicase DDX47/RRP3 [EC:
5.6.2.7
]
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spo03009
]
SPAC823.08c
Enzymes [BR:
spo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SPAC823.08c
Ribosome biogenesis [BR:
spo03009
]
Eukaryotic type
90S particles
Helicases
SPAC823.08c
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
AAA_19
Motif
Other DBs
NCBI-GeneID:
2543571
NCBI-ProteinID:
NP_593835
PomBase:
SPAC823.08c
Ensembl:
SPAC823.08c
UniProt:
Q9P6N8
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Position
I:complement(2592453..2594218)
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AA seq
465 aa
AA seq
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MAPSEKKLTEDKKNSSLNKKIETSNSSSEKSSENNNGDSQNNEAPKTFKELGVIDELCEA
CEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQELWNNPSPFFAVVL
APTRELAYQISEQFEAIGGSIGVRSVVIVGGMDMVTQAVALSKKPHVLVCTPGRLMDHLE
NTKGFSLKNLKYLIMDEADRLLDMDFGPIIDKILKIIPHERRTLLFSATMTSKVEKLQRA
SLHQPVRVAVSSKFSTVDTLIQRYLFFPFKHKDTYLVYLVNELAGNSIIIFARTVNDTQR
LAILLRTLGFSAIPLHGQLSQSNRLGALNKFKSGARSTLVATDVAARGLDIPLVDVVINY
DIPTDSKAYIHRVGRTARAGRAGKSIALVTQYDLEPFLRIEATIGKKMQEYEIDKEGVFL
LSERVGEAQREAIIQMKEIHDRRKSKGKLHTKRKRDDLDREEQIY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcaccttctgagaaaaaacttactgaggataaaaaaaattcctcattgaataaaaag
attgaaacatctaattcaagctctgaaaaatcttcggaaaataataatggtgactcacaa
aacaacgaagcccctaaaacttttaaggaattaggagtaattgacgaattatgcgaagct
tgtgaaaaactgggatttaaaactccaactccgattcaacaagaagccattccagttgta
ttgaataaacgagatgttataggtctagctcaaactggtagtggtaaaactgcagcattt
gcgctgcctgtcattcaagaattgtggaacaatccgagcccattttttgcagtcgtgctt
gctccaactcgagaacttgcctatcaaatatctgaacaattcgaggctataggaggtagt
atcggcgttcgcagtgttgtaattgttggtggtatggatatggtaactcaagcagtcgct
ttatcaaaaaagcctcatgtcctagtttgtacacccggacgtctgatggatcatttggag
aacacgaaaggttttagtttaaagaatttgaaatatttaatcatggatgaagccgatcgt
cttcttgatatggattttggtccaattattgataaaattcttaaaattattcctcatgaa
agacgtactttgttattttctgctactatgactagcaaggttgaaaagcttcagcgtgca
tcccttcaccaacccgtgcgtgttgctgtatcttccaagtttagtaccgtcgatacccta
atacaacggtatttgttttttccatttaaacacaaggacacgtatctcgtttacttggta
aatgaacttgccggcaattcaattatcatattcgctcgtacagtaaacgatactcaacgg
ttggccatattattacgtaccttaggattttctgctattcctttacatggacagttgtct
caaagtaatcgtcttggggctttaaataaatttaagtcaggtgcgagatctactcttgtt
gcaactgatgtcgctgccagaggtctagatatacctcttgttgatgtagtaattaattac
gacattcctaccgactcaaaggcatatattcatagagttggtcgtaccgctcgagcaggt
cgggcaggtaaatctattgcattggttactcagtatgatttagaaccttttcttcgaatt
gaagctacaattggcaaaaaaatgcaggaatatgaaattgacaaggagggtgtatttctt
ttatctgaacgtgttggagaagctcaacgtgaagctattattcaaatgaaggagattcac
gataggagaaaatcaaagggaaaattgcacacgaagcgcaaacgtgatgatcttgatcgt
gaagaacaaatctattaa
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