Trichomonas vaginalis: TVAG_2v0547680
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Entry
TVAG_2v0547680 CDS
T01022
Name
(RefSeq) transcription elongation factor SPT6 family
KO
K11292
transcription elongation factor SPT6
Organism
tva
Trichomonas vaginalis
Brite
KEGG Orthology (KO) [BR:
tva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tva03021
]
TVAG_2v0547680
03036 Chromosome and associated proteins [BR:
tva03036
]
TVAG_2v0547680
Transcription machinery [BR:
tva03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
TVAG_2v0547680
Chromosome and associated proteins [BR:
tva03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
TVAG_2v0547680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
SH2
HTH_44
Spt6_S1
Tex_N
Motif
Other DBs
NCBI-GeneID:
4761494
NCBI-ProteinID:
XP_001315879
UniProt:
A2EUK7
LinkDB
All DBs
Position
II:complement(15024873..15028999)
Genome browser
AA seq
1360 aa
AA seq
DB search
MSEEEKNDQPAPPPAVESELSSESSSDYDEEPRINKKEAREDFRELISNRGPRLSRQIDS
SDSSGDLESDDEELDTRAPKKERVKIRKDDFVVGDDGSEIYHKKTSYAVSANANLTLNSD
QIKFANKLFAEPTEAPHVIKPKMPEIPDVAPVNLIPKNEFERECDRIPHDVDESKIADEA
RWIMDQHFKTRGGGERDIEALVEVLKELHNEKHTPQFIINYRKNIYRDTVIGDEDIYHIQ
NAIREFKIFSEKRIRIQPLIEHLGLTSDPSDDDQKTAMLRHFIRNADDTSLDDLYNFDEL
QMNPETTPKNTTFKRNAEYFQAYIDKFIYSPMDFVHILSLNSSLNDPPEPQTDPQQALQS
WHDELSTNYPSVFPNIEVMTRQMVGFAAKQLATHPLFIDMLRTRFSPHIVINTQPTTSGA
KSSMMYPKGKYGSIKRLKNKPIISFNKTDKWLLIVEAFQSGNLTYTIDTDKGIDKEIEEI
STKYRMRYPSDWDSLRKDILQMAIKDFIWPQIVKETEDELKKNAEKFVCNEIETRLFSHL
TSPPYTQLSTSQPYILKSQKILAMHYTSDDTKRKIYAAMVNEKGNIIDSLYLHSKIIDSK
VIVNWDDPDKQIKEGSANNLAANDLEVIKSKVALVKFIETHHPPVIAITASCLKSASLVH
AIVELVHSRIQPESNRPRVLLAPVEHAILYAHSRDCCKAELHELPKDKRADGAEFLIAAS
TARRMQNPMAELCRLITPKKNHLTDWAMTPFQSVFSGNNDNTSPVAQAIERACLRAIALT
GVDMTAAISNPNLRSTVQFIPGLGPHTAEKIIDIAQKDNIKQRSKLRSALHEFDDMVVKN
ALPFIRFPMENKLNDDHSLEDNNYLDGTLIPMDEYNTAMDILKRGFFESQYIETNIIELF
SRTSKDTDITEPVKRYVAVSHSNNEPLIEFIAQQLRLGPYETLRYPAVDWDAPKPNPKSP
LEKYQSDRLAVHDDENNYYRCMSDHEVFEALTSASTETIQENVITAIRIVKIDTNRMQVI
VGEHSSGIRAFCTQDVANNVQYLRKTLDTNIDSFDGRDTSSERELINTTHDAVITRVDES
MVSIDVCYITDIIEKAKDYHRLITDEDSFDFAGEDEARAEALSAEKNMIVTYQPRSINHK
NFKQVTMAQAEAELSNQSVGSFIFRPSSKGNEHISLTILFPNNICANYDIVEQNKQSVDA
VGKDLFIRDQKFSDLEEIKWKFIYPIKTQLENIMKHEKWVEDPSQANEIITEEKAKNENM
LVYRITTSIQNKGYLELVWEGTKDHRVVEPIRLFGDKIFYRQQQYNDIRSLILFFKKIGY
KKEPEARPRLIAHQPTDTEKMLARRTNASNNSKVNLYGRH
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaagaagaaaaaaacgaccaaccagcgcctcctccagctgtagagtctgagctc
tcttcagaatcttcctcagactatgatgaggaaccacgcattaacaagaaagaagcaagg
gaagatttccgcgaattaatttcaaaccgcggcccacgtctttcccgtcaaattgattcc
tcagattctagcggtgatttagaaagtgatgatgaagaattggacacaagggctccaaag
aaagagcgcgttaaaattagaaaagatgatttcgttgtcggagatgatggatcagaaatt
taccacaagaaaacaagttacgccgtttctgcaaatgcaaacttaactttaaactcagat
caaatcaaatttgctaataaacttttcgctgaaccaacagaagcaccacacgtcatcaaa
cctaagatgccagaaattcctgatgtcgctcccgtcaatctcattccaaagaacgaattc
gaacgtgaatgtgatcgcattcctcacgatgtcgacgaatccaagattgctgatgaagcc
agatggattatggaccagcacttcaagacacgtggcggtggagaaagagatatcgaagct
ctcgttgaagttctcaaagaattacataacgaaaaacacactccacaattcattatcaac
tacagaaagaacatttacagagataccgtcattggtgatgaggatatttaccatatccag
aacgcaattcgcgaattcaagattttctcagagaaacgtatcagaatccagccactcatt
gagcatctcggtcttacatcagatccttcagatgatgaccagaagacagccatgcttcgt
cacttcattcgtaacgctgatgacacatctctcgacgatctctacaatttcgatgaatta
cagatgaacccagagaccacacccaagaacactaccttcaagcgcaacgccgagtacttc
caagcttatatcgataagttcatctactcacccatggatttcgtccacattttgtctctc
aacagctccctgaacgatccaccagagccacagaccgatccacagcaggctctccagagc
tggcacgatgaattgtccacgaattacccatctgtctttccaaacatcgaagtcatgacc
cgtcagatggtcggattcgccgccaagcagttggccacacatcctctcttcatcgacatg
ctcaggacacgtttctcaccacacattgtcatcaacacacagccaacaacttccggagcc
aagtcatccatgatgtatccgaagggcaagtacggctcaatcaagcgcctcaagaacaag
ccgatcatctcattcaacaagaccgacaaatggctcttgattgttgaagccttccagagc
ggcaacttgacatacacgatcgacaccgacaaaggcattgacaaagagatcgaagagatt
tccacgaagtacaggatgaggtatccatccgactgggactccctccgcaaggacattctc
cagatggcaatcaaggacttcatctggccacagattgtcaaggagacagaggacgaactc
aagaagaacgctgagaaattcgtctgcaacgagattgagacaagactcttctcacacttg
acatctcctccttacacacagttgtcaacatcacagccatacatcctcaagtcccagaag
atcctcgcaatgcactacacatccgatgacacaaagcgcaagatttacgctgcaatggta
aacgagaaaggaaacatcatcgattctctttacttgcactccaagatcatcgactcgaag
gtcattgtcaactgggatgatcctgacaaacagatcaaggaaggctctgcaaacaacctc
gcagcaaatgacctcgaagtcatcaagtcaaaggttgctttggtcaagttcattgaaaca
caccatcctcctgtcatcgcaatcacagcttcatgcctcaagtctgcttctttggttcac
gcaattgtcgaactcgttcacagcagaatccagccagagtcaaatcgtccaagagttctt
ttggctcctgtcgaacacgcaattctctacgctcacagccgggactgctgcaaggccgaa
ttgcacgaacttccaaaggacaaaagagctgatggcgctgagttcttgattgctgcatca
acagccagaagaatgcagaatccaatggcagaactctgcagactcatcacaccaaagaag
aaccatctcactgactgggccatgacacctttccagtctgtcttctccggaaacaacgac
aacacatctcctgttgcacaggcaatcgaaagagcctgcttgagagccatcgcattgaca
ggtgttgacatgacagcggccatttccaatccaaatctcaggtcaacagttcagttcatc
cctggtttgggtccacacactgcagagaagatcatcgacatcgctcagaaggacaacatc
aaacagagatcgaaactcagatcagcactccacgaattcgatgacatggttgtcaagaac
gctcttcctttcatcagattcccaatggagaacaagttgaacgacgaccattcactcgaa
gacaacaattacctcgacggaacactcatcccaatggacgaatacaacacagcaatggat
atccttaagagaggtttcttcgagtcccagtacatcgagacaaacatcatcgaactcttc
tcccgcacttcaaaggacacagacatcactgagccagtaaagagatacgtcgctgtttcc
cactcaaacaacgaacctctcatcgaattcatcgctcagcagctgagattaggtccgtac
gaaacactcagatacccagcagttgattgggatgctccaaagccaaatccgaagtctcct
ctcgagaaataccagagcgacagattggccgtccacgatgatgaaaacaactactacaga
tgcatgagtgaccacgaagttttcgaagcactcacatcagcatccacagaaacaatccaa
gaaaacgtcatcacagcgatcagaatcgttaagattgacacaaacaggatgcaagtaatt
gttggtgaacactccagtggcatcagagctttctgcacacaggatgttgcaaacaatgtc
cagtacttgagaaagacattggacacaaacatcgattcatttgatggaagagacacatcg
agtgaaagagagttgatcaacacaacacacgatgctgtaatcacaagagttgatgagagc
atggtttctatcgatgtctgctacatcacagacataatcgagaaagcaaaggattaccac
agattgatcactgatgaagactcattcgatttcgcaggagaagatgaagctcgcgccgaa
gcattgagtgcagaaaagaacatgattgtcacttaccagccgagatccatcaaccacaag
aacttcaaacaagttacaatggctcaggctgaagcagaactttcaaaccaatctgttgga
tcattcatattcagaccatcttccaaaggtaatgaacatatctcattgacaatcctcttc
ccgaacaacatctgcgcaaactacgacatcgttgagcagaacaaacaaagtgtcgatgct
gtcggtaaagatttgttcatcagagaccaaaagttctcagatttggaagaaatcaagtgg
aagttcatctatccaatcaaaactcaattggagaatatcatgaaacacgagaaatgggtt
gaagatccatcccaagccaatgaaatcatcactgaagagaaggcaaagaatgagaacatg
ttggtttacagaataacaacatcaatacaaaacaagggttacttggaacttgtttgggaa
ggaactaaagaccacagagttgttgaaccaatcagattattcggtgacaagatcttctac
agacaacaacaatataatgatatcagatcattgattttgttcttcaagaagatcggttat
aagaaggaaccagaagcaagaccaaggcttatcgctcaccagccaacagatacagagaag
atgctggcaagaagaacaaatgcttcaaacaacagcaaagttaacttgtacggaagacac
taa
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