SSDB Best Search Result

Entry:bde:BDP_1176 (168 a.a.)
Name:Holliday junction DNA helicase ruvA
KO:K03550 holliday junction DNA helicase RuvA

Search Result : 240 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
blo:BL0728 probable holliday junction DNA helicase RuvA K03550     208      775     0.725      171     
tfu:Tfu_2094 Holliday junction DNA helicase subunit Ruv K03550     202      373     0.406      170     
kfl:Kfla_4404 Holliday junction DNA helicase RuvA       K03550     199      368     0.402      169     
stp:Strop_1809 Holliday junction DNA helicase subunit R K03550     200      364     0.371      170     
cau:Caur_1418 Holliday junction DNA helicase RuvA       K03550     195      359     0.451      133     
sma:SAVERM_6834 putative Holliday junction DNA helicase K03550     203      359     0.404      171     
sen:SACE_2022 Holliday junction DNA helicase            K03550     200      351     0.361      166     
pfr:PFREUD_11710 Holliday junction ATP-dependent DNA he K03550     203      346     0.395      172     
sco:SCO1519 holliday junction DNA helicase              K03550     201      345     0.392      171     
gpo:GPOL_c22060 holliday junction ATP-dependent DNA hel K03550     198      343     0.377      138     
sct:SCAT_5304 Holliday junction ATP-dependent DNA helic K03550     207      343     0.359      170     
rer:RER_29240 Holliday junction DNA helicase RuvA       K03550     199      343     0.339      168     
sgr:SGR_6016 putative Holliday junction DNA helicase su K03550     208      343     0.368      171     
cth:Cthe_0181 Holliday junction DNA helicase RuvA       K03550     202      339     0.458      153     
dsy:DSY2467 hypothetical protein                        K03550     201      339     0.423      168     
cdf:CD630_28060 Holliday junction ATP-dependent DNA hel K03550     200      338     0.381      147     
rha:RHA1_ro06893 holliday junction DNA helicase         K03550     200      336     0.353      170     
sro:Sros_6112 Holliday junction DNA helicase subunit Ru K03550     206      335     0.380      166     
nca:Noca_2386 Holliday junction DNA helicase subunit Ru K03550     200      335     0.376      170     
ngo:NGO_1730 ATP-dependent DNA helicase RuvA            K03550     194      334     0.390      141     
ccyc:SCMU_22050 Holliday junction ATP-dependent DNA hel K03550     213      333     0.343      169     
nfa:NFA_36960 putative Holliday junction DNA helicase B K03550     201      333     0.339      168     
sgu:SGLAU_06125 Holliday junction ATP-dependent DNA hel K03550     201      330     0.385      169     
amd:AMED_5300 holliday junction DNA helicase RuvA       K03550     198      330     0.357      168     
nme:NMB0265 Holliday junction DNA helicase RuvA         K03550     194      330     0.390      141     
gvi:glr2884 ORF_ID:glr2884                              K03550     206      325     0.404      136     
ase:ACPL_6534 Holliday junction ATP-dependent DNA helic K03550     200      324     0.333      168     
bma:BMA2354 Holliday junction DNA helicase RuvA         K03550     193      324     0.388      139     
bps:BPSL2898 holliday junction DNA helicase             K03550     193      324     0.388      139     
ttm:Tthe_1567 Holliday junction DNA helicase RuvA       K03550     188      323     0.386      140     
msm:MSMEG_2944 holliday junction DNA helicase RuvA      K03550     195      323     0.361      166     
tde:TDE_1863 Holliday junction DNA helicase RuvA        K03550     201      323     0.396      154     
mmi:MMAR_2110 Holliday junction DNA helicase RuvA       K03550     197      321     0.333      168     
mul:MUL_1715 Holliday junction DNA helicase RuvA        K03550     197      321     0.333      168     
mab:MAB_2883c Holliday junction DNA helicase RuvA       K03550     202      317     0.325      169     
cpy:Cphy_1333 Holliday junction DNA helicase RuvA       K03550     203      314     0.391      169     
cdi:DIP1376 holliday junction DNA-helicase              K03550     203      312     0.392      143     
abo:ABO_0752 Holliday junction DNA helicase RuvA        K03550     201      309     0.351      168     
tte:TTE1179 Holliday junction resolvasome DNA-binding s K03550     187      307     0.385      143     
dds:Ddes_1268 Holliday junction DNA helicase RuvA       K03550     204      305     0.359      167     
chy:CHY_1523 Holliday junction DNA helicase RuvA        K03550     195      305     0.354      147     
hin:HI_0313 Holliday junction DNA helicase (ruvA)       K03550     204      302     0.337      169     
brh:RBRH_02062 Holliday junction DNA helicase ruvA      K03550     193      301     0.378      135     
sat:SYN_02972 holliday junction DNA helicase            K03550     204      301     0.349      166     
bxe:Bxe_A0616 DNA recombination protein, RuvA           K03550     193      301     0.367      166     
mtu:Rv2593c Holliday junction ATP-dependent DNA helicas K03550     196      301     0.315      168     
mtc:MT2670 Holliday junction DNA helicase RuvA          K03550     196      301     0.315      168     
ksk:KSE_14440 putative Holliday junction ATP-dependent  K03550     203      300     0.353      170     
cst:CLOST_1317 component of RuvABC resolvasome, regulat K03550     199      300     0.329      164     
tex:Teth514_1453 Holliday junction DNA helicase RuvA    K03550     187      300     0.381      139     
mta:Moth_1701 Holliday junction DNA helicase subunit Ru K03550     202      300     0.327      165     
tel:tlr0532 Holliday junction DNA helicase              K03550     210      299     0.331      160     
sno:Snov_3048 Holliday junction DNA helicase RuvA       K03550     205      297     0.367      169     
dvu:DVU_2256 Holliday junction DNA helicase RuvA        K03550     202      297     0.337      166     
tpa:TP_0543 Holliday junction DNA helicase (ruvA)       K03550     227      297     0.356      174     
cgl:Cgl1661 Holliday junction resolvasome DNA-binding s K03550     206      296     0.355      169     
afn:Acfer_1529 Holliday junction DNA helicase RuvA      K03550     204      295     0.390      172     
lcb:LCABL_08330 Holliday junction ATP-dependent DNA hel K03550     198      294     0.411      129     
sao:SAOUHSC_01751 Holliday junction DNA helicase RuvA   K03550     200      294     0.339      165     
tth:TT_C1696 holliday junction DNA helicase ruvA        K03550     191      294     0.372      145     
bpf:BpOF4_11660 Holliday junction DNA helicase RuvA     K03550     205      292     0.343      166     
cbo:CBO3071 holliday junction DNA helicase              K03550     197      292     0.344      157     
mva:Mvan_2574 DNA recombination protein RuvA, domain I  K03550     195      292     0.349      166     
syf:Synpcc7942_2298 Holliday junction DNA helicase subu K03550     207      292     0.342      155     
syc:syc1802_c holliday junction DNA helicase RuvA       K03550     207      292     0.342      155     
ral:Rumal_2564 Holliday junction DNA helicase RuvA      K03550     199      291     0.368      171     
sau:SA1468 holliday junction DNA helicase               K03550     200      291     0.339      165     
cac:CA_C2285 Holliday junction specific DNA helicase, s K03550     201      291     0.377      146     
acb:A1S_2587 holliday junction helicase subunit A       K03550     199      289     0.366      142     
apl:APL_0283 holliday junction ATP-dependent DNA helica K03550     201      289     0.288      156     
gme:Gmet_0745 Holliday junction DNA helicase RuvA       K03550     199      289     0.358      162     
rso:RSc0501 probable holliday junction dna helicase ruv K03550     193      289     0.355      166     
det:DET0442 Holliday junction DNA helicase RuvA         K03550     194      288     0.368      163     
sml:Smlt3711 putative Holliday junction DNA helicase    K03550     197      287     0.363      146     
hdu:HD_1758 Holliday junction DNA helicase RuvA         K03550     201      287     0.314      153     
smar:SM39_2251 component of RuvABC resolvasome, regulat K03550     204      286     0.336      146     
psb:Psyr_1409 Holliday junction DNA helicase subunit Ru K03550     202      286     0.329      164     
ser:SERP1206 Holliday junction DNA helicase RuvA        K03550     200      286     0.347      144     
mca:MCA1222 Holliday junction DNA helicase RuvA         K03550     201      286     0.376      133     
pst:PSPTO_3978 Holliday junction DNA helicase RuvA      K03550     202      286     0.329      164     
pmu:PM0977 RuvA                                         K03550     204      286     0.333      168     
elm:ELI_3657 Holliday junction DNA helicase RuvA        K03550     203      285     0.356      163     
ppu:PP_1216 Holliday junction ATP-dependent DNA helicas K03550     205      285     0.352      162     
xcc:XCC3025 holliday junction binding protein, DNA heli K03550     194      285     0.342      146     
mle:ML0482 Holliday junction DNA helicase component     K03550     203      285     0.340      141     
azc:AZC_0515 DNA recombination protein                  K03550     206      284     0.389      144     
cro:ROD_19031 holliday junction ATP-dependent DNA helic K03550     203      283     0.342      158     
rpa:TX73_005655 Holliday junction branch migration prot K03550     205      283     0.337      169     
enc:ECL_01437 Holliday junction DNA helicase RuvA       K03550     204      282     0.323      158     
dde:Dde_2323 Holliday junction DNA helicase RuvA        K03550     201      282     0.327      165     
gsu:GSU1076 Holliday junction DNA helicase RuvA         K03550     199      282     0.340      147     
sty:STY2103 Holliday junction DNA helicase              K03550     203      282     0.331      148     
stm:STM1895 Holliday junction helicase subunit A        K03550     203      282     0.331      148     
ecs:ECs_2571 component of RuvABC resolvasome regulatory K03550     203      282     0.331      157     
eco:b1861 Holliday junction branch migration complex su K03550     203      282     0.331      157     
cdn:BN940_14571 Holliday junction DNA helicase RuvA     K03550     194      281     0.386      132     
cvi:CV_4223 holliday junction DNA helicase              K03550     197      281     0.353      136     
xac:XAC3149 holliday junction binding protein DNA helic K03550     194      281     0.336      146     
kpn:KPN_02376 Holliday junction DNA helicase motor prot K03550     203      280     0.325      157     
ctt:CtCNB1_4290 Holliday junction DNA helicase RuvA     K03550     191      279     0.356      163     
esa:ESA_01380 hypothetical protein                      K03550     203      279     0.333      156     
xom:XOO1545 holliday junction binding protein DNA helic K03550     194      279     0.336      146     
ddd:Dda3937_01621 component of RuvABC resolvasome, regu K03550     205      278     0.354      147     
pfl:PFL_4764 Holliday junction DNA helicase RuvA        K03550     202      278     0.344      163     
xfa:XF_1904 holliday junction binding protein, DNA heli K03550     194      278     0.333      147     
tma:TM0165 Holliday junction DNA helicase               K03550     191      278     0.372      148     
eam:EAMY_2064 Holliday junction ATP-dependent DNA helic K03550     204      277     0.327      147     
sfl:SF1871 Holliday junction DNA helicase RuvA          K03550     203      277     0.325      157     
phe:Phep_3832 Holliday junction DNA helicase RuvA       K03550     194      276     0.329      161     
bhe:BH14900 Holliday junction DNA helicase ruvA         K03550     205      276     0.356      135     
sme:SMc03966 Probable holliday junction DNA helicase    K03550     205      276     0.335      170     
reu:Reut_A0484 Holliday junction DNA helicase subunit R K03550     193      275     0.358      137     
syn:sll0876 Holliday junction DNA helicase; RuvA        K03550     211      275     0.362      152     
pae:PA0966 Holliday junction ATP-dependent DNA helicase K03550     201      275     0.348      141     
pam:PANA_2201 RuvA                                      K03550     204      274     0.333      147     
rle:RL3989 putative Holliday junction DNA helicase      K03550     204      274     0.329      173     
afr:AFE_0061 Holliday junction DNA helicase RuvA        K03550     193      272     0.329      164     
sur:STAUR_5780 Holliday junction ATP-dependent DNA heli K03550     203      271     0.368      136     
ljo:LJ_0467 Holliday junction DNA helicase RuvA         K03550     192      271     0.370      127     
lla:L0266 DNA helicase RuvA                             K03550     197      271     0.312      157     
avn:Avin_36700 holliday junction DNA helicase RuvA      K03550     204      270     0.350      140     
llm:llmg_2488 holliday junction DNA helicase ruvA       K03550     197      270     0.306      157     
yen:YE2393 Holliday junction DNA helicase               K03550     205      270     0.340      147     
ret:RHE_CH03481 holliday junction DNA helicase protein  K03550     204      270     0.320      169     
aci:ACIAD2614 holliday junction helicase subunit A      K03550     204      270     0.354      144     
reh:H16_A0498 holliday junction resolvasome, DNA-bindin K03550     193      269     0.350      137     
plu:plu2111 Holliday junction DNA helicase              K03550     205      269     0.321      165     
vch:VC_1846 Holliday junction DNA helicase RuvA         K03550     204      269     0.317      161     
eba:ebA3959 Holliday junction DNA helicase              K03550     199      268     0.345      139     
bja:blr1536 holliday junction DNA helicase              K03550     205      267     0.368      133     
atu:Atu3723 Holliday junction DNA helicase RuvA         K03550     205      267     0.320      169     
hel:HELO_2561 Holliday junction ATP-dependent DNA helic K03550     203      266     0.338      136     
mea:Mex_1p0739 Holliday junction ATP-dependent DNA heli K03550     208      266     0.308      169     
gtn:GTNG_2522 Holliday junction DNA helicase RuvA       K03550     194      266     0.348      158     
lpn:lpg1288 Holliday junction DNA helicase RuvA         K03550     199      266     0.296      142     
cja:CJA_1030 Holliday junction DNA helicase RuvA        K03550     205      265     0.321      168     
pde:Pden_0695 Holliday junction DNA helicase RuvA       K03550     223      265     0.506      89      
mxa:MXAN_4972 Holliday junction DNA helicase RuvA       K03550     202      265     0.356      132     
bha:BH1224 holliday junction DNA helicase               K03550     203      265     0.327      162     
zga:ZOBELLIA_2376 Holliday junction DNA helicase        K03550     193      263     0.323      164     
pmr:PMI1115 Holliday junction ATP-dependent DNA helicas K03550     207      263     0.342      146     
alv:Alvin_0155 Holliday junction DNA helicase RuvA      K03550     211      261     0.301      176     
cps:CPS_2116 Holliday junction DNA helicase RuvA        K03550     211      261     0.313      150     
neu:NE0212 probable Holliday junction DNA helicase subu K03550     195      261     0.343      137     
bmf:BAB1_1715 Bacterial DNA recombination protein, RuvA K03550     205      260     0.326      175     
vfi:VF_0951 component of RuvABC resolvasome, regulatory K03550     207      260     0.306      170     
yps:YPTB2040 Holliday junction DNA helicase             K03550     226      260     0.315      146     
smu:SMU_2088 putative Holliday junction DNA helicase Ru K03550     197      260     0.352      128     
bms:BR1703 Holliday junction DNA helicase RuvA          K03550     205      260     0.326      175     
ypk:y2253 Holliday junction helicase subunit B          K03550     226      260     0.315      146     
ype:YPO2057 Holliday junction DNA helicase              K03550     204      260     0.315      146     
cpe:CPE1948 holliday junction DNA helicase              K03550     201      260     0.340      147     
bme:BMEI0333 holliday junction DNA helicase ruva        K03550     205      260     0.326      175     
pjd:Pjdr2_4401 Holliday junction DNA helicase RuvA      K03550     212      259     0.324      179     
rru:Rru_A1088 DNA recombination protein RuvA            K03550     212      259     0.341      176     
npu:Npun_R3568 Holliday junction DNA helicase RuvA      K03550     228      258     0.327      165     
bvu:BVU_1658 Holliday junction DNA helicase ruvA        K03550     197      258     0.346      159     
rco:RC0531 holliday junction DNA helicase RuvA          K03550     203      258     0.331      145     
xau:Xaut_3067 Holliday junction DNA helicase RuvA       K03550     205      256     0.354      144     
rcp:RCAP_rcc03217 holliday junction DNA helicase RuvA   K03550     222      255     0.333      183     
dra:DR_1274 Holliday junction binding protein           K03550     201      255     0.336      143     
sjp:SJA_C1-00990 Holliday junction resolvasome DNA-bind K03550     202      254     0.378      135     
mlo:mll3898 Holliday branch migration protein; RuvA     K03550     206      254     0.320      175     
ana:all0375 holliday junction DNA helicase              K03550     213      254     0.329      164     
ava:Ava_2820 Holliday junction DNA helicase subunit Ruv K03550     213      253     0.335      164     
efa:EF0066 Holliday junction DNA helicase RuvA          K03550     204      253     0.379      132     
vpa:VP1051 holliday junction DNA helicase RuvA          K03550     204      253     0.311      148     
syp:SYNPCC7002_A1270 Holliday junction DNA helicase Ruv K03550     209      252     0.307      166     
pdi:BDI_2660 Holliday junction DNA helicase RuvA        K03550     196      252     0.315      162     
swi:Swit_2140 Holliday junction DNA helicase RuvA       K03550     199      252     0.358      134     
lpl:lp_2287 holliday junction DNA helicase RuvA         K03550     203      252     0.327      162     
vvu:VV1_2159 Holliday junction DNA helicase RuvA        K03550     204      252     0.306      157     
rpr:RP385 HOLLIDAY JUNCTION DNA HELICASE RUVA (ruvA)    K03550     199      252     0.340      141     
anb:ANA_C12944 Holliday junction DNA helicase RuvA      K03550     213      251     0.301      163     
eca:ECA2492 holliday junction DNA helicase              K03550     205      250     0.336      149     
ccr:CC_3237 Holliday junction DNA helicase RuvA         K03550     205      249     0.337      172     
bpe:BP3418 holliday junction DNA helicase               K03550     190      248     0.303      165     
fps:FP2122 Holliday junction DNA helicase RuvA          K03550     193      247     0.296      162     
bce:BC4415 Holliday junction DNA helicase ruvA          K03550     205      247     0.333      144     
spy:SPy_2119 putative Holiday junction DNA helicase     K03550     198      246     0.349      129     
bsu:BSU27740 holliday junction ATP-dependent DNA helica K03550     201      246     0.346      133     
btk:BT9727_4154 holliday junction DNA helicase          K03550     205      245     0.333      144     
ban:BA_4651 Holliday junction DNA helicase RuvA         K03550     205      245     0.333      144     
oih:OB2037 holliday junction DNA helicase               K03550     201      245     0.335      161     
spn:SP_0179 Holliday junction DNA helicase RuvA         K03550     197      245     0.320      128     
lin:ruvA highly similar to Holliday junction DNA helica K03550     201      245     0.324      148     
csa:Csal_1847 Holliday junction DNA helicase subunit Ru K03550     206      244     0.314      137     
wsu:WS0440 PUTATIVE HOLLIDAY JUNCTION DNA HELICASE      K03550     189      244     0.351      134     
lmo:lmo1533 Holliday junction DNA helicase RuvA         K03550     201      244     0.327      150     
son:SO_2430 Holliday junction DNA helicase RuvA         K03550     205      243     0.340      144     
spr:spr0165 Holliday junction DNA helicase              K03550     197      243     0.320      128     
ssy:SLG_00290 Holliday junction ATP-dependent DNA helic K03550     205      242     0.339      165     
pgi:PG_0811 Holliday junction DNA helicase RuvA         K03550     202      241     0.325      163     
scl:sce0297 holliday junction DNA helicase              K03550     244      240     0.318      151     
cte:CT0262 Holliday junction DNA helicase RuvA          K03550     201      238     0.306      160     
ftu:FTT_0658 holliday junction DNA helicase, subunit A  K03550     217      233     0.301      143     
lba:Lebu_1880 Holliday junction DNA helicase RuvA       K03550     207      232     0.280      150     
mar:MAE_10280 holliday junction DNA helicase            K03550     209      232     0.304      148     
ooe:OEOE_0577 Holliday junction DNA helicase subunit Ru K03550     194      232     0.339      127     
sil:SPO3116 Holliday junction DNA helicase RuvA         K03550     224      232     0.420      88      
fnu:FN1104 Holliday junction DNA helicase ruvA          K03550     194      229     0.294      160     
zmo:ZMO0155 Holliday junction DNA helicase RuvA         K03550     213      224     0.340      144     
rsp:RSP_0555 Holliday junction DNA helicase subunit Ruv K03550     224      223     0.321      168     
cpn:CPn_0620 Holliday Junction Helicase                 K03550     207      223     0.307      166     
nar:Saro_0422 Holliday junction DNA helicase RuvA       K03550     204      222     0.325      163     
hpy:HP_0883 Holliday junction DNA helicase (ruvA)       K03550     183      221     0.348      92      
gox:GOX1681 Holliday junction DNA helicase RuvA         K03550     200      220     0.312      157     
hpj:jhp_0815 HOLLIDAY JUNCTION DNA HELICASE             K03550     183      220     0.337      92      
bfr:BF3689 Holliday junction DNA helicase RuvA          K03550     201      213     0.301      163     
ctb:CTL0763 holliday junction DNA helicase              K03550     200      210     0.314      153     
ctr:CT_501 Holliday junction DNA helicase RuvA          K03550     200      210     0.314      153     
cje:Cj0799c Holliday junction DNA helicase RuvA         K03550     183      207     0.330      115     
bth:BT_1978 Holliday junction DNA helicase ruvA         K03550     201      205     0.294      170     
bbu:BB_0023 holliday junction DNA helicase RuvA         K03550     197      204     0.263      156     
pma:Pro_0754 Holliday junction resolvasome DNA-binding  K03550     222      201     0.274      146     
wol:WD_1113 Holliday junction DNA helicase RuvA         K03550     190      197     0.301      163     
lil:LA_2903 holliday junction DNA helicase RuvA         K03550     212      197     0.308      156     
mge:MG_358 Holliday junction DNA helicase               K03550     205      130     0.261      138     
mpn:MPN_535 Holliday junction DNA helicase RuvA         K03550     206      118     0.265      117     
vvi:100254744 3-hydroxyisobutyryl-CoA hydrolase-like pr K05605     405      115     0.304      171     
osa:4324027 transcription initiation factor TFIID subun K03131     541      114     0.244      127     
mdm:103446484 transcription termination factor MTERF15, K15031     395      112     0.271      155     
afm:AFUA_4G09200 hypothetical protein                              261      111     0.244      127     
tcr:507715.70 hypothetical protein                                3602      111     0.316      79      
maj:MAA_05405 SET domain protein                                   467      108     0.253      186     
xla:108698645 CAP-Gly domain-containing linker protein  K10423     534      108     0.278      126     
sly:101257014 diacylglycerol kinase 5 isoform X2        K00901     493      106     0.310      129     
vg:26131703 Aeropyrum pernix spindle-shaped virus 1; hy            479      105     0.288      118     
sot:102588461 uncharacterized LOC102588461                         518      105     0.296      142     
ape:APE_0879.1 hypothetical protein                                477      105     0.288      118     
ppp:112286681 armadillo repeat-containing protein LFR              466      104     0.307      114     
ptex:113453441 T-box transcription factor TBX3-like                142      102     0.370      81      
dme:Dmel_CG44341 uncharacterized protein                           214      102     0.235      115     
mdo:100014471 adaptor related protein complex 1 mu 1 su K12393     554      100     0.272      92      
amj:102559020 potassium channel tetramerization domain  K26581     928       99     0.270      115     
pai:PAE3092 DNA-(apurinic or apyrimidinic site) lyase,             220       99     0.373      59      
csv:105436285 uncharacterized protein LOC105436285                 155       95     0.285      130     
tgu:115497920 uncharacterized protein LOC115497920                 249       93     0.309      97      
pab:PAB0619 Putative transcriptional regulator                     100       86     0.324      74      
cne:CNC04490 hypothetical protein                       K03963      82       80     0.372      43      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]