| Entry: | cai:Caci_7941 (268 a.a.) |
|---|---|
| Name: | RNA polymerase, sigma-24 subunit, ECF subfamily |
| KO: | K03088 RNA polymerase sigma-70 factor, ECF subfamily |
Search Result : 204 hits (reference genome only)
Entry KO len SW-score identity overlap ------------------------------------------------------------------ ------------------------------------- sma:SAVERM_3117 putative RNA polymerase ECF-subfamily s K03088 219 978 0.742 198 sgr:SGR_2378 putative RNA polymerase ECF-subfamily sigm K03088 215 969 0.798 178 sct:SCAT_4004 RNA polymerase sigma factor SigE K03088 262 966 0.661 233 ksk:KSE_48540 putative RNA polymerase ECF subfamily sig K03088 252 962 0.791 182 sco:SCO5147 putative ECF-subfamily sigma factor K03088 223 961 0.782 179 sgu:SGLAU_22055 RNA polymerase sigma-W factor K03088 218 958 0.739 199 tfu:Tfu_0504 RNA polymerase sigma-70 factor, ECF subfam K03088 191 951 0.793 179 sro:Sros_8416 RNA polymerase, sigma-24 subunit, ECF sub K03088 210 916 0.770 174 amd:AMED_1067 RNA polymerase sigma-70 factor, ECF subfa K03088 203 896 0.670 200 sen:SACE_1037 putative ECF family RNA polymerase sigma K03088 201 880 0.686 191 ccyc:SCMU_27220 RNA polymerase sigma factor SigE 209 856 0.656 192 mva:Mvan_4496 RNA polymerase, sigma 29 subunit, SigE K03088 269 835 0.652 204 msm:MSMEG_5072 extracytoplasmic function alternative si K03088 257 831 0.644 202 nca:Noca_1210 RNA polymerase, sigma 29 subunit, SigE 230 830 0.608 209 kfl:Kfla_5481 RNA polymerase, sigma-24 subunit, ECF sub 228 828 0.649 205 mab:MAB_1362 Probable alternative RNA polymerase sigma K03088 256 827 0.649 202 mtu:Rv1221 ECF RNA polymerase sigma factor SigE K03088 257 823 0.675 191 mtc:MT1259 RNA polymerase sigma-70 factor, ECF subfamil K03088 257 823 0.675 191 mle:ML1076 ECF subfamily sigma subunit K03088 263 818 0.652 201 gpo:GPOL_c17470 RNA polymerase sigma factor, sigma-70 f K03088 201 817 0.676 185 nfa:NFA_47290 putative sigma factor K03088 255 811 0.644 202 mmi:MMAR_4216 alternative RNA polymerase sigma factor S K03088 255 805 0.681 182 mul:MUL_4519 alternative RNA polymerase sigma factor Si K03088 255 805 0.681 182 rha:RHA1_ro05977 sigma factor, sigma 70 type, group 4 ( K03088 210 799 0.711 173 rer:RER_41580 putative RNA polymerase ECF-type sigma fa K03088 273 790 0.645 197 cgl:Cgl1120 DNA-directed RNA polymerase specialized sig K03088 213 774 0.584 202 cdi:DIP0994 Putative ECF family RNA polymerase sigma fa K03088 239 755 0.601 198 syf:Synpcc7942_1923 sigma-24 (FecI-like) 218 400 0.389 208 syc:syc2171_d group3 RNA polymerase ECF-type sigma fact 218 400 0.389 208 cau:Caur_0925 RNA polymerase sigma factor, sigma-70 fam K03088 200 397 0.391 179 anb:ANA_C10551 RNA polymerase sigma factor SigG 218 388 0.371 202 gtn:GTNG_0147 RNA polymerase ECF(extracytoplasmic funct K03088 162 382 0.394 160 scl:sce7897 ECF-family RNA polymerase sigma factor K03088 292 381 0.333 258 ana:alr3280 RNA polymerase sigma-E factor 218 381 0.399 178 npu:Npun_F4153 RNA polymerase, sigma-24 subunit, ECF su 218 380 0.393 178 ava:Ava_4933 RNA polymerase, sigma subunit, ECF family 218 377 0.393 178 mta:Moth_2362 RNA polymerase, sigma-24 subunit, RpoE K03088 200 374 0.376 186 syp:SYNPCC7002_A1970 RNA polymerase sigma-E factor 218 368 0.407 167 mar:MAE_02820 RNA polymerase ECF-type sigma-E factor 218 367 0.377 167 stp:Strop_3714 sigma-70 region 2 domain protein K03088 204 358 0.376 178 gvi:gll1739 ORF_ID:gll1739; RNA polymerase ECF-type (gr 214 356 0.371 175 ase:ACPL_7568 RNA polymerase sigma-E factor K03088 272 355 0.359 195 syn:slr1545 RNA polymerase sigma-E factor 223 352 0.335 197 tel:tlr2109 group3 RNA polymerase sigma factor 219 350 0.398 171 eba:ebA4517 RNA polymerase sigma factor (sigma24) K03088 189 349 0.372 156 pfr:PFREUD_10200 RNA polymerase sigma-70 factor, sigma- K03088 217 347 0.354 206 mxa:MXAN_4733 RNA polymerase sigma-70 factor, ECF subfa K03088 208 347 0.337 196 dra:DR_0180 RNA polymerase sigma-E factor K03088 229 347 0.351 194 swi:Swit_3426 RNA polymerase, sigma-24 subunit, ECF sub 229 345 0.368 204 ccr:CC_2751 RNA polymerase sigma-70 factor, ECF subfami K03088 186 344 0.353 184 sur:STAUR_4594 RNA polymerase sigma factor K03088 213 338 0.347 173 cth:Cthe_0890 RNA polymerase, sigma-24 subunit, ECF sub K03088 220 337 0.307 192 ttm:Tthe_1099 RNA polymerase, sigma-24 subunit, ECF sub 183 335 0.354 181 oih:OB0228 RNA polymerase ECF-type sigma factor (sigma- K03088 187 335 0.337 166 pjd:Pjdr2_5633 RNA polymerase, sigma-24 subunit, ECF su K03088 188 331 0.319 166 blo:BL1357 RNA polymerase sigma-E factor K03088 269 331 0.337 196 cte:CT0648 RNA polymerase sigma-70 factor, ECF subfamil K03088 198 331 0.364 162 xfa:XF_2239 RNA polymerase sigma-H factor K03088 206 328 0.356 174 bpf:BpOF4_08800 RNA polymerase sigma factor SigW K03088 187 327 0.321 165 bha:BH0263 RNA polymerase ECF-type sigma factor K03088 187 327 0.349 166 mlo:mll8140 RNA polymerase ECF-type sigma factor K03088 208 323 0.351 188 bps:BPSL1456 putative sigma factor K03088 235 322 0.357 207 cvi:CV_2058 RNA polymerase sigma-E factor K03088 199 322 0.357 182 dsy:DSY4418 hypothetical protein 189 321 0.350 157 cdn:BN940_04201 RNA polymerase ECF-type sigma factor 205 320 0.311 193 bsu:BSU01730 RNA polymerase sigma factor SigW K03088 187 319 0.350 163 xcc:XCC1306 RNA polymerase sigma factor K03088 195 318 0.358 193 nar:Saro_0546 sigma-24 (FecI-like) K03088 215 314 0.344 160 sml:Smlt3514 putative ALTERNATIVE RNA POLYMERASE SIGMA K03088 192 313 0.359 192 tte:TTE0872 DNA-directed RNA polymerase specialized sig K03088 191 313 0.301 176 bma:BMA1406 RNA polymerase sigma-70 factor, ECF subfami K03088 235 306 0.348 207 mea:Mex_1p5327 RNA polymerase sigma factor 248 305 0.338 222 cja:CJA_2213 RNA polymerase sigma-H factor (Sigma-30) K03088 196 303 0.352 159 ssy:SLG_27400 RNA polymerase ECF-type sigma factor 179 302 0.392 148 bxe:Bxe_A1078 RNA polymerase, sigma-24 subunit, RpoE K03088 199 302 0.350 163 neu:NE2331 Sigma factor, ECF subfamily K03088 200 299 0.360 161 xac:XAC1319 RNA polymerase sigma-H factor K03088 206 299 0.333 174 ban:BA_3324 RNA polymerase sigma-70 factor, ECF family K03088 166 298 0.321 159 btk:BT9727_3026 RNA polymerase sigma-70 factor K03088 166 297 0.314 159 brh:RBRH_02621 RNA polymerase sigma-E factor K03088 239 295 0.344 163 ctt:CtCNB1_0976 RNA polymerase, sigma-24 subunit, ECF s K03088 209 295 0.322 199 pfl:PFL_1448 RNA polymerase sigma factor AlgU K03088 193 291 0.327 168 rpa:TX73_023085 RNA polymerase sigma factor K03088 208 291 0.322 208 bpe:BP2234 putative RNA polymerase sigma factor 200 291 0.292 192 psb:Psyr_3958 RNA polymerase, sigma-24 subunit, RpoE K03088 193 290 0.323 167 pst:PSPTO_4224 RNA polymerase sigma-24 factor K03088 193 290 0.323 167 pae:PA0762 RNA polymerase sigma factor AlgU K03088 193 290 0.333 168 sjp:SJA_C1-15720 ECF-type sigma factor 162 289 0.363 146 ppu:PP_1427 RNA polymerase sigma E factor K03088 193 289 0.327 168 afr:AFE_1394 RNA polymerase sigma-E factor K03088 208 288 0.343 169 reh:H16_A2563 DNA-directed RNA polymerase sigma subunit K03088 199 286 0.331 163 abo:ABO_1639 DNA-directed RNA polymerase specialized si K03088 194 285 0.333 162 bja:blr3694 ORF_ID:blr3694; putative RNA polymerase sig K03088 206 285 0.321 196 reu:Reut_A2259 RNA polymerase, sigma-24 subunit, RpoE K03088 199 284 0.331 163 rso:RSc1055 probable rna polymerase sigma-e factor (sig K03088 199 284 0.331 163 ret:RHE_PF00422 putative RNA polymerase sigma factor pr K03088 236 283 0.317 221 alv:Alvin_1726 RNA polymerase, sigma-24 subunit, ECF su K03088 192 278 0.331 172 son:SO_1342 RNA polymerase sigma factor 24 RpoE K03088 192 275 0.345 165 sno:Snov_0053 RNA polymerase, sigma-24 subunit, ECF sub K03088 183 273 0.352 162 mca:MCA1471 RNA polymerase sigma-30 factor K03088 192 272 0.311 177 lpn:lpg1577 RNA polymerase sigma E factor RpoE K03088 187 270 0.321 156 bce:BC1114 RNA polymerase sigma factor sigM K03088 161 270 0.331 160 cac:CA_C3267 Specialized sigma subunit of RNA polymeras K03088 190 269 0.294 170 rru:Rru_A2537 RNA polymerase, sigma-24 subunit, ECF sub K03088 193 268 0.344 163 sme:SM_b21484 putative RNA polymerase sigma-E factor (s K03088 173 268 0.351 151 apl:APL_0394 RNA polymerase sigma-70 factor K03088 192 267 0.330 182 hdu:HD_1172 RNA polymerase sigma-E factor K03088 192 265 0.356 163 rcp:RCAP_rcc00699 RNA polymerase sigma-24 factor K03088 181 263 0.308 185 pmu:PM1789 RpoE K03088 191 263 0.319 163 rsp:RSP_3095 RNA polymerase sigma-70 factor K03088 176 262 0.411 146 vvu:VV1_1559 RNA polymerase sigma factor RpoE K03088 192 262 0.317 164 sil:SPO2756 RNA polymerase sigma-70 factor, ECF family K03088 200 261 0.340 203 vpa:VP2578 RNA polymerase sigma-E factor K03088 192 261 0.329 155 azc:AZC_2427 RNA polymerase K03088 181 260 0.342 158 cps:CPS_4129 RNA polymerase sigma-24 factor K03088 208 259 0.335 158 gox:GOX2407 Putative RNA polymerase sigma-E factor (sig K03088 191 259 0.342 149 vch:VC_2467 RNA polymerase sigma-E factor K03088 190 257 0.329 155 hin:HI_0628 RNA polymerase sigma-E factor (rpoE) K03088 189 257 0.307 163 smar:SM39_3274 RNA polymerase sigma factor RpoE K03088 191 256 0.344 160 tma:TM1598 RNA polymerase sigma-E factor K03088 189 256 0.291 165 yps:YPTB2897 RNA polymerase sigma E factor K03088 191 255 0.344 160 ypk:y1290 RNA polymerase, sigma-E factor K03088 191 255 0.344 160 ype:YPO2711 RNA polymerase sigma E factor K03088 191 255 0.344 160 cpy:Cphy_3594 RNA polymerase, sigma-24 subunit, ECF sub 169 254 0.315 162 pde:Pden_1137 RNA polymerase, sigma-24 subunit, ECF sub K03088 157 252 0.335 161 xom:XOO2225 ECF sigma factor K03088 166 252 0.373 158 xau:Xaut_1595 RNA polymerase, sigma-24 subunit, ECF sub K03088 181 251 0.356 160 vg:65129154 uncultured phage cr10_1; RNA polymerase sig 187 250 0.276 170 yen:YE1010 RNA polymerase sigma E factor K03088 191 250 0.338 160 eca:ECA3284 RNA polymerase sigma-E factor K03088 191 250 0.338 160 rle:RL3235 putative RNA polymerase ECF sigma factor K03088 171 249 0.331 163 hel:HELO_3029 RNA polymerase sigma factor RpoE K03088 202 248 0.289 173 vfi:VF_2093 RNA polymerase, sigma-24 (sigma-E) factor K03088 192 247 0.306 160 enc:ECL_03911 RNA polymerase sigma factor RpoE K03088 191 246 0.338 157 pdi:BDI_2638 putative RNA polymerase ECF-type sigma fac 176 243 0.309 152 sfl:SF2635 RNA polymerase sigma factor RpoE K03088 191 243 0.329 155 ecs:ECs_3439 RNA polymerase sigma E factor K03088 191 243 0.329 155 eco:b2573 RNA polymerase sigma factor RpoE K03088 191 243 0.329 155 ddd:Dda3937_00607 RNA polymerase sigma-54 factor rpoN 184 242 0.290 162 pam:PANA_2899 RpoE K03088 192 242 0.323 155 cro:ROD_25201 RNA polymerase sigma-E factor (sigma-24) K03088 191 242 0.329 155 pmr:PMI1894 RNA polymerase sigma-E factor K03088 192 242 0.325 157 plu:plu3346 RNA polymerase sigma-E factor (sigma-24) K03088 189 242 0.333 156 sty:STY2833 RNA polymerase sigma-E factor (sigma-24) K03088 191 241 0.329 155 stm:STM2640 sigma E (sigma 24) factor of RNA polymerase K03088 191 241 0.329 155 bth:BT_3457 RNA polymerase ECF-type sigma factor 167 240 0.304 161 eam:EAMY_2631 RNA polymerase sigma-E factor (Sigma-24) K03088 191 239 0.308 159 ral:Rumal_2916 RNA polymerase, sigma-24 subunit, ECF su 167 238 0.311 164 csa:Csal_1626 RNA polymerase, sigma-24 subunit, RpoE K03088 201 237 0.269 167 sat:SYN_02037 sigma factor K03088 217 236 0.269 175 kpn:KPN_02898 RNA polymerase sigma-70 factor K03088 191 235 0.323 155 phe:Phep_3701 RNA polymerase sigma factor, sigma-70 fam 176 234 0.309 162 esa:ESA_00686 hypothetical protein K03088 191 233 0.310 155 bfr:BF1891 RNA polymerase ECF-type sigma factor 167 233 0.299 154 atu:Atu3084 ECF family sigma factor K03088 180 231 0.287 157 hth:HTH_0652 RNA polymerase ECF-type sigma factor K03088 193 229 0.321 159 bvu:BVU_3347 RNA polymerase ECF-type sigma factor K03088 155 227 0.318 154 zmo:ZMO1404 RNA polymerase, sigma-24 subunit, ECF subfa K03088 232 226 0.347 147 lil:LA_4098 RNA polymerase ECF-type sigma factor K03088 192 226 0.287 167 cdf:CD630_06770 Extracytoplasmic function (ECF) sigma f K03088 159 223 0.301 153 bhe:BH13830 RNA polymerase sigma factor, ecr subfamily K03088 184 223 0.320 147 rme:Rmet_6207 CnrH, sigma factor, involved in Co(II), N K24073 191 220 0.292 178 zga:ZOBELLIA_2567 RNA polymerase ECF-type sigma factor 170 218 0.244 164 avn:Avin_45020 RNA polymerase sigma factor, ECF subfami 172 217 0.309 152 cbo:CBO0836 RNA polymerase sigma factor K03088 170 215 0.234 175 efa:EF3180 RNA polymerase sigma-70 factor, ECF subfamil K03088 165 215 0.249 169 cst:CLOST_2374 SigV K03088 160 214 0.297 148 pgi:PG_1660 RNA polymerase sigma-70 factor, ECF subfami K03088 174 214 0.288 170 tex:Teth514_0644 RNA polymerase, sigma-24 subunit, ECF K03088 176 213 0.283 145 bmf:BAB1_1672 Sigma factor, ECF subfamily:Sigma-70 regi K03088 190 213 0.309 165 bms:BR1658 RNA polymerase sigma-70 factor, ECF subfamil K03088 190 213 0.309 165 bme:BMEI0371 regulatory factor virf homolog K03088 190 213 0.309 165 elm:ELI_1776 RNA polymerase sigma factor K03088 164 210 0.301 156 fnu:FN0479 RNA polymerase sigma-E factor 149 208 0.307 150 gsu:GSU0721 RNA polymerase sigma-24 factor, putative K03088 181 207 0.293 164 fps:FP1466 RNA polymerase ECF-type sigma factor K03088 182 205 0.238 172 tde:TDE_2320 RNA polymerase sigma-24 factor, putative K03088 213 201 0.245 159 cpe:CPE0716 RNA polymerase ECF-type sigma factor K03088 172 200 0.276 145 gme:Gmet_2792 RNA polymerase sigma factor K03088 206 198 0.269 134 det:DET1348 RNA polymerase sigma-70 factor, ECF subfami K03088 179 194 0.305 151 tth:TT_P0164 RNA polymerase sigma factor K03088 187 193 0.288 191 chy:CHY_1709 RNA polymerase sigma-Z factor K03088 186 191 0.205 161 lin:lin0443 similar to RNA polymerase ECF-type sigma fa K03088 182 185 0.242 157 aci:ACIAD1778 alternative RNAP sigma factor required fo K23514 161 180 0.286 147 lmo:lmo0423 RNA polymerase factor sigma C K03088 182 180 0.236 157 acb:A1S_2598 putative RNA polymerase sigma factor K03088 204 159 0.261 161 tpa:TP_0092 RNA polymerase sigma-24 factor (rpoE) K03088 162 158 0.269 145 ngo:NGO_1944 RNA polymerase sigma factor 195 145 0.257 183 nme:NMB2144 putative sigma factor K03088 195 144 0.251 183 cfa:486944 peroxidasin-like protein isoform X24 K19511 1372 133 0.229 210 wsu:WS1423 PUTATIVE RNA POLYMERASE SIGMA FACTOR 157 132 0.271 140 lpl:lp_0614 DNA-directed RNA polymerase, sigma-H factor K27000 200 131 0.254 189 afn:Acfer_0252 RNA polymerase, sigma-24 subunit, ECF su K27000 244 119 0.220 209 nta:107795934 endoglucanase 17-like isoform X1 K01179 508 118 0.262 126 mmu:57431 dnaJ homolog subfamily C member 4 isoform c K09524 244 116 0.251 175 ath:AT4G40050 signal transducer, putative (DUF3550/UPF0 K28475 458 116 0.212 184 sao:SAOUHSC_00515 hypothetical protein K27000 189 114 0.236 144 rno:361717 dnaJ homolog subfamily C member 4 K09524 238 114 0.246 175 sau:SA0492 hypothetical protein K27000 189 114 0.236 144 ser:SERP0174 RNA polymerase sigma factor sigW, putative K27000 191 109 0.193 166 ddi:DDB_G0271880 UPF0183 family protein K27411 519 103 0.245 147 tcr:511755.28 hypothetical protein 114 100 0.300 110 pto:PTO0303 lipopolysaccharide N-acetylglucosaminyltran 410 99 0.304 112 wol:WD_0591 conserved hypothetical protein K03088 164 95 0.178 157