SSDB Best Search Result

Entry:dca:Desca_1238 (199 a.a.)
Name:Holliday junction ATP-dependent DNA helicase ruvA
KO:K03550 holliday junction DNA helicase RuvA

Search Result : 244 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
tte:TTE1179 Holliday junction resolvasome DNA-binding s K03550     187      479     0.419      198     
dde:Dde_2323 Holliday junction DNA helicase RuvA        K03550     201      474     0.411      202     
sml:Smlt3711 putative Holliday junction DNA helicase    K03550     197      472     0.409      198     
cth:Cthe_0181 Holliday junction DNA helicase RuvA       K03550     202      467     0.405      205     
son:SO_2430 Holliday junction DNA helicase RuvA         K03550     205      459     0.398      206     
dsy:DSY2467 hypothetical protein                        K03550     201      457     0.393      201     
pfl:PFL_4764 Holliday junction DNA helicase RuvA        K03550     202      455     0.398      201     
gsu:GSU1076 Holliday junction DNA helicase RuvA         K03550     199      455     0.378      201     
tex:Teth514_1453 Holliday junction DNA helicase RuvA    K03550     187      449     0.409      198     
gme:Gmet_0745 Holliday junction DNA helicase RuvA       K03550     199      449     0.374      198     
cdn:BN940_14571 Holliday junction DNA helicase RuvA     K03550     194      448     0.429      198     
xom:XOO1545 holliday junction binding protein DNA helic K03550     194      440     0.392      199     
xcc:XCC3025 holliday junction binding protein, DNA heli K03550     194      438     0.400      200     
psb:Psyr_1409 Holliday junction DNA helicase subunit Ru K03550     202      437     0.388      201     
xac:XAC3149 holliday junction binding protein DNA helic K03550     194      436     0.400      200     
pae:PA0966 Holliday junction ATP-dependent DNA helicase K03550     201      436     0.392      204     
cte:CT0262 Holliday junction DNA helicase RuvA          K03550     201      436     0.393      196     
pfr:PFREUD_11710 Holliday junction ATP-dependent DNA he K03550     203      435     0.373      201     
dvu:DVU_2256 Holliday junction DNA helicase RuvA        K03550     202      434     0.375      200     
hel:HELO_2561 Holliday junction ATP-dependent DNA helic K03550     203      433     0.380      200     
pst:PSPTO_3978 Holliday junction DNA helicase RuvA      K03550     202      432     0.383      201     
ral:Rumal_2564 Holliday junction DNA helicase RuvA      K03550     199      431     0.410      200     
cvi:CV_4223 holliday junction DNA helicase              K03550     197      430     0.401      197     
gvi:glr2884 ORF_ID:glr2884                              K03550     206      428     0.382      204     
ttm:Tthe_1567 Holliday junction DNA helicase RuvA       K03550     188      427     0.410      200     
cdf:CD630_28060 Holliday junction ATP-dependent DNA hel K03550     200      427     0.397      194     
ppu:PP_1216 Holliday junction ATP-dependent DNA helicas K03550     205      426     0.391      202     
cpy:Cphy_1333 Holliday junction DNA helicase RuvA       K03550     203      423     0.368      182     
rru:Rru_A1088 DNA recombination protein RuvA            K03550     212      423     0.404      208     
eba:ebA3959 Holliday junction DNA helicase              K03550     199      423     0.402      204     
xfa:XF_1904 holliday junction binding protein, DNA heli K03550     194      423     0.397      199     
cbo:CBO3071 holliday junction DNA helicase              K03550     197      422     0.396      202     
sen:SACE_2022 Holliday junction DNA helicase            K03550     200      422     0.353      201     
csa:Csal_1847 Holliday junction DNA helicase subunit Ru K03550     206      422     0.391      207     
abo:ABO_0752 Holliday junction DNA helicase RuvA        K03550     201      421     0.397      204     
avn:Avin_36700 holliday junction DNA helicase RuvA      K03550     204      420     0.369      203     
kfl:Kfla_4404 Holliday junction DNA helicase RuvA       K03550     199      419     0.378      201     
sat:SYN_02972 holliday junction DNA helicase            K03550     204      413     0.358      204     
amd:AMED_5300 holliday junction DNA helicase RuvA       K03550     198      411     0.350      197     
nfa:NFA_36960 putative Holliday junction DNA helicase B K03550     201      411     0.358      201     
det:DET0442 Holliday junction DNA helicase RuvA         K03550     194      410     0.397      174     
sco:SCO1519 holliday junction DNA helicase              K03550     201      410     0.368      204     
cpe:CPE1948 holliday junction DNA helicase              K03550     201      410     0.366      202     
afn:Acfer_1529 Holliday junction DNA helicase RuvA      K03550     204      409     0.377      207     
tfu:Tfu_2094 Holliday junction DNA helicase subunit Ruv K03550     202      409     0.377      204     
neu:NE0212 probable Holliday junction DNA helicase subu K03550     195      408     0.388      201     
sct:SCAT_5304 Holliday junction ATP-dependent DNA helic K03550     207      407     0.360      203     
aci:ACIAD2614 holliday junction helicase subunit A      K03550     204      407     0.386      202     
vch:VC_1846 Holliday junction DNA helicase RuvA         K03550     204      407     0.341      205     
afr:AFE_0061 Holliday junction DNA helicase RuvA        K03550     193      406     0.362      199     
pmr:PMI1115 Holliday junction ATP-dependent DNA helicas K03550     207      406     0.372      207     
vpa:VP1051 holliday junction DNA helicase RuvA          K03550     204      406     0.351      205     
ksk:KSE_14440 putative Holliday junction ATP-dependent  K03550     203      405     0.350      203     
alv:Alvin_0155 Holliday junction DNA helicase RuvA      K03550     211      405     0.363      212     
mlo:mll3898 Holliday branch migration protein; RuvA     K03550     206      402     0.413      208     
bvu:BVU_1658 Holliday junction DNA helicase ruvA        K03550     197      401     0.391      197     
cps:CPS_2116 Holliday junction DNA helicase RuvA        K03550     211      401     0.335      212     
vfi:VF_0951 component of RuvABC resolvasome, regulatory K03550     207      401     0.364      209     
sfl:SF1871 Holliday junction DNA helicase RuvA          K03550     203      401     0.360      203     
mea:Mex_1p0739 Holliday junction ATP-dependent DNA heli K03550     208      400     0.398      211     
vvu:VV1_2159 Holliday junction DNA helicase RuvA        K03550     204      400     0.351      205     
mtu:Rv2593c Holliday junction ATP-dependent DNA helicas K03550     196      400     0.368      201     
mtc:MT2670 Holliday junction DNA helicase RuvA          K03550     196      400     0.368      201     
ecs:ECs_2571 component of RuvABC resolvasome regulatory K03550     203      400     0.360      203     
eco:b1861 Holliday junction branch migration complex su K03550     203      400     0.360      203     
mta:Moth_1701 Holliday junction DNA helicase subunit Ru K03550     202      399     0.365      197     
mca:MCA1222 Holliday junction DNA helicase RuvA         K03550     201      399     0.372      199     
sma:SAVERM_6834 putative Holliday junction DNA helicase K03550     203      399     0.390      205     
smar:SM39_2251 component of RuvABC resolvasome, regulat K03550     204      398     0.353      204     
apl:APL_0283 holliday junction ATP-dependent DNA helica K03550     201      398     0.350      200     
pde:Pden_0695 Holliday junction DNA helicase RuvA       K03550     223      398     0.394      221     
msm:MSMEG_2944 holliday junction DNA helicase RuvA      K03550     195      398     0.357      196     
elm:ELI_3657 Holliday junction DNA helicase RuvA        K03550     203      397     0.345      203     
brh:RBRH_02062 Holliday junction DNA helicase ruvA      K03550     193      395     0.387      204     
pjd:Pjdr2_4401 Holliday junction DNA helicase RuvA      K03550     212      395     0.362      210     
dds:Ddes_1268 Holliday junction DNA helicase RuvA       K03550     204      395     0.353      201     
acb:A1S_2587 holliday junction helicase subunit A       K03550     199      395     0.402      204     
syf:Synpcc7942_2298 Holliday junction DNA helicase subu K03550     207      395     0.392      181     
syc:syc1802_c holliday junction DNA helicase RuvA       K03550     207      395     0.392      181     
pmu:PM0977 RuvA                                         K03550     204      395     0.355      203     
plu:plu2111 Holliday junction DNA helicase              K03550     205      394     0.366      205     
rle:RL3989 putative Holliday junction DNA helicase      K03550     204      393     0.394      208     
bce:BC4415 Holliday junction DNA helicase ruvA          K03550     205      393     0.388      206     
rha:RHA1_ro06893 holliday junction DNA helicase         K03550     200      392     0.335      200     
ngo:NGO_1730 ATP-dependent DNA helicase RuvA            K03550     194      392     0.360      197     
nme:NMB0265 Holliday junction DNA helicase RuvA         K03550     194      392     0.360      197     
ccr:CC_3237 Holliday junction DNA helicase RuvA         K03550     205      392     0.374      203     
rsp:RSP_0555 Holliday junction DNA helicase subunit Ruv K03550     224      391     0.374      222     
hdu:HD_1758 Holliday junction DNA helicase RuvA         K03550     201      391     0.355      200     
ype:YPO2057 Holliday junction DNA helicase              K03550     204      391     0.364      206     
ddd:Dda3937_01621 component of RuvABC resolvasome, regu K03550     205      390     0.362      207     
nca:Noca_2386 Holliday junction DNA helicase subunit Ru K03550     200      390     0.350      200     
btk:BT9727_4154 holliday junction DNA helicase          K03550     205      390     0.388      206     
ban:BA_4651 Holliday junction DNA helicase RuvA         K03550     205      390     0.388      206     
sme:SMc03966 Probable holliday junction DNA helicase    K03550     205      390     0.401      207     
mle:ML0482 Holliday junction DNA helicase component     K03550     203      390     0.364      206     
chy:CHY_1523 Holliday junction DNA helicase RuvA        K03550     195      389     0.433      171     
sur:STAUR_5780 Holliday junction ATP-dependent DNA heli K03550     203      388     0.365      200     
mab:MAB_2883c Holliday junction DNA helicase RuvA       K03550     202      387     0.346      205     
swi:Swit_2140 Holliday junction DNA helicase RuvA       K03550     199      386     0.390      200     
mmi:MMAR_2110 Holliday junction DNA helicase RuvA       K03550     197      385     0.368      204     
esa:ESA_01380 hypothetical protein                      K03550     203      385     0.355      203     
mul:MUL_1715 Holliday junction DNA helicase RuvA        K03550     197      385     0.368      204     
ret:RHE_CH03481 holliday junction DNA helicase protein  K03550     204      385     0.404      208     
yps:YPTB2040 Holliday junction DNA helicase             K03550     226      385     0.359      206     
bpe:BP3418 holliday junction DNA helicase               K03550     190      385     0.391      197     
ypk:y2253 Holliday junction helicase subunit B          K03550     226      385     0.359      206     
cst:CLOST_1317 component of RuvABC resolvasome, regulat K03550     199      384     0.375      200     
ljo:LJ_0467 Holliday junction DNA helicase RuvA         K03550     192      384     0.395      167     
rpa:TX73_005655 Holliday junction branch migration prot K03550     205      384     0.386      207     
rso:RSc0501 probable holliday junction dna helicase ruv K03550     193      384     0.376      202     
sgu:SGLAU_06125 Holliday junction ATP-dependent DNA hel K03550     201      383     0.348      204     
reu:Reut_A0484 Holliday junction DNA helicase subunit R K03550     193      383     0.397      204     
atu:Atu3723 Holliday junction DNA helicase RuvA         K03550     205      383     0.382      207     
sao:SAOUHSC_01751 Holliday junction DNA helicase RuvA   K03550     200      382     0.365      200     
bma:BMA2354 Holliday junction DNA helicase RuvA         K03550     193      382     0.385      205     
bps:BPSL2898 holliday junction DNA helicase             K03550     193      382     0.385      205     
ana:all0375 holliday junction DNA helicase              K03550     213      382     0.394      213     
ava:Ava_2820 Holliday junction DNA helicase subunit Ruv K03550     213      381     0.399      213     
sno:Snov_3048 Holliday junction DNA helicase RuvA       K03550     205      380     0.401      207     
bsu:BSU27740 holliday junction ATP-dependent DNA helica K03550     201      380     0.368      204     
kpn:KPN_02376 Holliday junction DNA helicase motor prot K03550     203      379     0.350      203     
bmf:BAB1_1715 Bacterial DNA recombination protein, RuvA K03550     205      379     0.397      209     
mxa:MXAN_4972 Holliday junction DNA helicase RuvA       K03550     202      379     0.382      199     
ser:SERP1206 Holliday junction DNA helicase RuvA        K03550     200      379     0.381      202     
bja:blr1536 holliday junction DNA helicase              K03550     205      379     0.380      208     
bms:BR1703 Holliday junction DNA helicase RuvA          K03550     205      379     0.397      209     
sau:SA1468 holliday junction DNA helicase               K03550     200      379     0.365      200     
cpn:CPn_0620 Holliday Junction Helicase                 K03550     207      379     0.343      201     
bme:BMEI0333 holliday junction DNA helicase ruva        K03550     205      379     0.397      209     
sro:Sros_6112 Holliday junction DNA helicase subunit Ru K03550     206      378     0.371      205     
sgr:SGR_6016 putative Holliday junction DNA helicase su K03550     208      378     0.346      208     
bfr:BF3689 Holliday junction DNA helicase RuvA          K03550     201      378     0.348      201     
hin:HI_0313 Holliday junction DNA helicase (ruvA)       K03550     204      378     0.360      203     
ase:ACPL_6534 Holliday junction ATP-dependent DNA helic K03550     200      377     0.347      199     
cro:ROD_19031 holliday junction ATP-dependent DNA helic K03550     203      377     0.345      203     
reh:H16_A0498 holliday junction resolvasome, DNA-bindin K03550     193      377     0.383      201     
sil:SPO3116 Holliday junction DNA helicase RuvA         K03550     224      377     0.377      223     
cac:CA_C2285 Holliday junction specific DNA helicase, s K03550     201      377     0.351      202     
yen:YE2393 Holliday junction DNA helicase               K03550     205      376     0.362      207     
llm:llmg_2488 holliday junction DNA helicase ruvA       K03550     197      375     0.371      197     
ssy:SLG_00290 Holliday junction ATP-dependent DNA helic K03550     205      373     0.377      204     
cja:CJA_1030 Holliday junction DNA helicase RuvA        K03550     205      373     0.335      203     
npu:Npun_R3568 Holliday junction DNA helicase RuvA      K03550     228      373     0.390      210     
bhe:BH14900 Holliday junction DNA helicase ruvA         K03550     205      373     0.359      209     
tth:TT_C1696 holliday junction DNA helicase ruvA        K03550     191      373     0.367      196     
sty:STY2103 Holliday junction DNA helicase              K03550     203      373     0.340      203     
stm:STM1895 Holliday junction helicase subunit A        K03550     203      373     0.340      203     
spr:spr0165 Holliday junction DNA helicase              K03550     197      373     0.360      197     
eam:EAMY_2064 Holliday junction ATP-dependent DNA helic K03550     204      371     0.361      208     
mva:Mvan_2574 DNA recombination protein RuvA, domain I  K03550     195      371     0.350      197     
spn:SP_0179 Holliday junction DNA helicase RuvA         K03550     197      371     0.360      197     
bxe:Bxe_A0616 DNA recombination protein, RuvA           K03550     193      370     0.377      199     
ftu:FTT_0658 holliday junction DNA helicase, subunit A  K03550     217      370     0.347      213     
ooe:OEOE_0577 Holliday junction DNA helicase subunit Ru K03550     194      369     0.377      199     
ccyc:SCMU_22050 Holliday junction ATP-dependent DNA hel K03550     213      368     0.333      201     
gpo:GPOL_c22060 holliday junction ATP-dependent DNA hel K03550     198      368     0.327      196     
enc:ECL_01437 Holliday junction DNA helicase RuvA       K03550     204      368     0.343      204     
eca:ECA2492 holliday junction DNA helicase              K03550     205      368     0.332      205     
lla:L0266 DNA helicase RuvA                             K03550     197      368     0.371      197     
rer:RER_29240 Holliday junction DNA helicase RuvA       K03550     199      366     0.315      200     
spy:SPy_2119 putative Holiday junction DNA helicase     K03550     198      366     0.360      197     
dra:DR_1274 Holliday junction binding protein           K03550     201      366     0.355      200     
cgl:Cgl1661 Holliday junction resolvasome DNA-binding s K03550     206      364     0.343      204     
anb:ANA_C12944 Holliday junction DNA helicase RuvA      K03550     213      363     0.371      213     
azc:AZC_0515 DNA recombination protein                  K03550     206      363     0.359      206     
cau:Caur_1418 Holliday junction DNA helicase RuvA       K03550     195      363     0.349      195     
xau:Xaut_3067 Holliday junction DNA helicase RuvA       K03550     205      363     0.348      204     
smu:SMU_2088 putative Holliday junction DNA helicase Ru K03550     197      363     0.369      198     
ctt:CtCNB1_4290 Holliday junction DNA helicase RuvA     K03550     191      362     0.355      197     
scl:sce0297 holliday junction DNA helicase              K03550     244      362     0.337      208     
bth:BT_1978 Holliday junction DNA helicase ruvA         K03550     201      362     0.333      201     
pam:PANA_2201 RuvA                                      K03550     204      361     0.333      204     
sjp:SJA_C1-00990 Holliday junction resolvasome DNA-bind K03550     202      360     0.369      203     
efa:EF0066 Holliday junction DNA helicase RuvA          K03550     204      359     0.351      202     
pdi:BDI_2660 Holliday junction DNA helicase RuvA        K03550     196      358     0.330      197     
gtn:GTNG_2522 Holliday junction DNA helicase RuvA       K03550     194      358     0.392      176     
phe:Phep_3832 Holliday junction DNA helicase RuvA       K03550     194      357     0.335      200     
fps:FP2122 Holliday junction DNA helicase RuvA          K03550     193      356     0.340      197     
tel:tlr0532 Holliday junction DNA helicase              K03550     210      355     0.348      210     
nar:Saro_0422 Holliday junction DNA helicase RuvA       K03550     204      352     0.374      203     
blo:BL0728 probable holliday junction DNA helicase RuvA K03550     208      351     0.341      182     
lpl:lp_2287 holliday junction DNA helicase RuvA         K03550     203      351     0.333      204     
lba:Lebu_1880 Holliday junction DNA helicase RuvA       K03550     207      350     0.340      206     
rcp:RCAP_rcc03217 holliday junction DNA helicase RuvA   K03550     222      348     0.357      221     
syn:sll0876 Holliday junction DNA helicase; RuvA        K03550     211      348     0.333      210     
zga:ZOBELLIA_2376 Holliday junction DNA helicase        K03550     193      347     0.310      197     
bha:BH1224 holliday junction DNA helicase               K03550     203      347     0.375      200     
tma:TM0165 Holliday junction DNA helicase               K03550     191      346     0.359      198     
ctb:CTL0763 holliday junction DNA helicase              K03550     200      342     0.335      200     
ctr:CT_501 Holliday junction DNA helicase RuvA          K03550     200      342     0.335      200     
bpf:BpOF4_11660 Holliday junction DNA helicase RuvA     K03550     205      340     0.356      202     
lpn:lpg1288 Holliday junction DNA helicase RuvA         K03550     199      339     0.338      201     
lcb:LCABL_08330 Holliday junction ATP-dependent DNA hel K03550     198      335     0.357      171     
mar:MAE_10280 holliday junction DNA helicase            K03550     209      335     0.389      185     
rco:RC0531 holliday junction DNA helicase RuvA          K03550     203      333     0.343      201     
oih:OB2037 holliday junction DNA helicase               K03550     201      332     0.330      200     
stp:Strop_1809 Holliday junction DNA helicase subunit R K03550     200      331     0.318      198     
cdi:DIP1376 holliday junction DNA-helicase              K03550     203      330     0.327      202     
rpr:RP385 HOLLIDAY JUNCTION DNA HELICASE RUVA (ruvA)    K03550     199      325     0.338      198     
gox:GOX1681 Holliday junction DNA helicase RuvA         K03550     200      324     0.332      205     
lmo:lmo1533 Holliday junction DNA helicase RuvA         K03550     201      319     0.368      201     
fnu:FN1104 Holliday junction DNA helicase ruvA          K03550     194      319     0.310      197     
lin:ruvA highly similar to Holliday junction DNA helica K03550     201      314     0.360      200     
syp:SYNPCC7002_A1270 Holliday junction DNA helicase Ruv K03550     209      310     0.332      184     
wsu:WS0440 PUTATIVE HOLLIDAY JUNCTION DNA HELICASE      K03550     189      300     0.332      196     
zmo:ZMO0155 Holliday junction DNA helicase RuvA         K03550     213      298     0.341      211     
pgi:PG_0811 Holliday junction DNA helicase RuvA         K03550     202      294     0.311      206     
tde:TDE_1863 Holliday junction DNA helicase RuvA        K03550     201      289     0.345      165     
pma:Pro_0754 Holliday junction resolvasome DNA-binding  K03550     222      282     0.307      179     
tpa:TP_0543 Holliday junction DNA helicase (ruvA)       K03550     227      281     0.309      217     
hpy:HP_0883 Holliday junction DNA helicase (ruvA)       K03550     183      281     0.327      196     
wol:WD_1113 Holliday junction DNA helicase RuvA         K03550     190      280     0.305      200     
hpj:jhp_0815 HOLLIDAY JUNCTION DNA HELICASE             K03550     183      280     0.332      196     
cje:Cj0799c Holliday junction DNA helicase RuvA         K03550     183      279     0.315      197     
lil:LA_2903 holliday junction DNA helicase RuvA         K03550     212      248     0.263      213     
bbu:BB_0023 holliday junction DNA helicase RuvA         K03550     197      222     0.305      131     
mge:MG_358 Holliday junction DNA helicase               K03550     205      173     0.257      202     
mpn:MPN_535 Holliday junction DNA helicase RuvA         K03550     206      167     0.251      203     
cpoc:100731730 LOW QUALITY PROTEIN: ATP-dependent DNA h K11273     862      119     0.262      164     
tac:Ta0758 DNA-dependent DNA polymerase X related prote K02347     532      118     0.216      176     
fvr:FVEG_17153 hypothetical protein                     K20221    1098      116     0.320      97      
ani:ANIA_01680 hypothetical protein                               1237      114     0.240      121     
tru:101063567 L-threo-3-hydroxyaspartate ammonia-lyase- K01754     551      111     0.303      109     
tgo:29769818 hypothetical protein                                  337      110     0.373      51      
nta:107785068 uncharacterized protein LOC107785068                 687      108     0.283      159     
tre:TRIREDRAFT_37921 hypothetical protein                          461      108     0.285      123     
vg:40078597 Arthrobacter phage Joann; dCTP deaminase               309      107     0.314      169     
rno:296169 proteasome subunit beta type-3-like          K02735     205      105     0.263      167     
amj:106737365 neural retina leucine zipper              K09038     239      104     0.324      74      
cin:100175965 39S ribosomal protein L3, mitochondrial-l K02906     392      103     0.385      65      
afm:AFUA_4G06390 mitochondrial carrier protein                     333      103     0.245      184     
smo:SELMODRAFT_25372 hypothetical protein               K02206     190      101     0.340      50      
bta:132343359 homeobox protein cut-like 1                          195      100     0.354      48      
ecb:100068477 proteasome subunit beta type-3            K02735     205       99     0.285      158     
oas:101116399 amyloid beta precursor protein binding fa            259       96     0.244      156     
cfa:488831 amyloid-beta A4 precursor protein-binding fa            210       96     0.237      156     
tva:4736960 hypothetical protein                                    86       95     0.257      70      
ptr:461184 amyloid beta precursor protein binding famil            210       95     0.231      156     
bmor:733042 Erg28-domain containing protein                        174       92     0.229      166     
osa:107276861 uncharacterized protein                              118       90     0.303      89      
pmur:107287171 potassium voltage-gated channel subfamil K04895     115       89     0.365      52      
cre:CHLRE_09g386745v5 uncharacterized protein                       89       89     0.400      55      
ppp:141045640 uncharacterized protein                              147       87     0.311      106     

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