SSDB Best Search Result

Entry:dly:Dehly_0322 (385 a.a.)
Name:restriction modification system DNA specificity domain protein
KO:K01154 type I restriction enzyme, S subunit

Search Result : 195 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
afr:AFE_1576 type I restriction-modification system, S  K01154     399      685     0.340      403     
lla:L0310 type I restriction enzyme specificity protein K01154     407      649     0.305      397     
syp:SYNPCC7002_C0004 type 1 restriction-modification sy K01154     398      530     0.295      403     
anb:ANA_C10111 type I restriction enzyme                K01154     470      480     0.436      163     
rcp:RCAP_rcc01929 type I restriction-modification syste K01154     401      429     0.268      403     
mja:MJ_ECL41 hypothetical protein                       K01154     432      412     0.277      415     
ccr:CC_0621 type I restriction-modification system, S s K01154     450      408     0.269      424     
mar:MAE_56980 restriction modification system DNA speci K01154     395      407     0.272      416     
cst:CLOST_1969 Restriction modification system DNA spec K01154     405      396     0.288      371     
ccyc:SCMU_22760 hypothetical protein                    K01154     409      391     0.379      174     
tte:TTE1545 Restriction endonuclease S subunits         K01154     398      378     0.249      402     
mth:MTH_941 type I restriction modification system, sub K01154     407      378     0.275      404     
lpl:lp_0940 type I restriction-modification system,spec K01154     380      362     0.244      393     
afu:AF_1710 type I restriction-modification enzyme, S s K01154     341      360     0.280      347     
npu:Npun_F4901 restriction modification system DNA spec K01154     530      339     0.247      478     
mac:MA_2415 type I restriction modification enzyme prot K01154     391      329     0.242      400     
mmg:MTBMA_c14710 predicted type I restriction-modificat K01154     435      324     0.319      182     
xau:Xaut_1095 restriction modification system DNA speci K01154     450      317     0.225      418     
sen:SACE_0869 putative restriction modification system  K01154     411      317     0.231      402     
mma:MM_2199 type I restriction-modification system spec K01154     384      314     0.244      393     
blo:BL1783 HsdS specificity protein of type I restricti K01154     406      313     0.244      405     
vg:9887417 Cafeteria roenbergensis virus BV-PW1; putati            913      309     0.275      182     
hpy:HP_0790 anti-codon nuclease masking agent (prrB)    K01154     431      301     0.251      403     
xcc:XCC2904 type I restriction enzyme (specificity chai K01154     415      299     0.233      408     
nmr:Nmar_0607 restriction modification system DNA speci K01154     438      297     0.347      167     
dde:Dde_3425 restriction modification system DNA specif K01154     390      294     0.287      188     
spy:SPy_1905 putative type I site-specific deoxyribonuc K01154     399      292     0.245      404     
hvo:HVO_2271 type I site-specific deoxyribonuclease sub K01154     410      291     0.230      404     
cdn:BN940_05981 Type I restriction-modification system, K01154     384      289     0.260      369     
cte:CT0679 type I restriction system specificity protei K01154     444      288     0.269      182     
xfa:XF_2726 type I restriction-modification system spec K01154     409      284     0.339      165     
zga:ZOBELLIA_1655 Type I restriction enzyme ZgaDII, S s K01154     423      283     0.306      170     
gtn:GTNG_0763 Putative type I specificity subunit HsdS  K01154     509      283     0.247      470     
cja:CJA_3638 type I restriction system specificity prot K01154     398      279     0.274      168     
pto:PTO0077 type I restriction-modification system spec K01154     441      276     0.308      185     
llm:llmg_0660 probable specificity determinant HsdS     K01154     416      271     0.227      410     
cbo:CBO0679 type I restriction enzyme S subunit         K01154     386      267     0.259      402     
alv:Alvin_3177 restriction modification system DNA spec K01154     448      263     0.262      187     
ral:Rumal_3903 restriction modification system DNA spec K01154     498      262     0.282      170     
bth:BT_4540 putative Type I restriction enzyme MjaXP sp K01154     428      261     0.224      388     
eba:ebA2610 restriction modification system specificity K01154     424      258     0.320      181     
hth:HTH_0018 restriction endonuclease S subunit         K01154     426      256     0.214      416     
hpj:jhp_0414 TYPE I RESTRICTION ENZYME (SPECIFICITY SUB K01154     409      255     0.219      415     
pmu:PM1538 HsdA                                         K01154     435      254     0.271      192     
smar:SM39_4857 putative type I restriction system speci K01154     446      251     0.275      153     
rle:RL1097 putative type I restriction enzyme specifici K01154     456      244     0.247      430     
mca:MCA1890 type I restriction-modification system, S s K01154     416      243     0.256      273     
mba:Mbar_A3272 type I restriction-modification system s K01154     492      238     0.219      457     
sty:STY4881 subunit S of type I restriction-modificatio K01154     462      237     0.233      424     
plu:plu4320 Type I restriction enzyme specificity prote K01154     365      236     0.255      259     
pma:Pro_0707 Restriction endonuclease S subunit         K01154     425      234     0.218      409     
ava:Ava_3267 Restriction modification system DNA specif K01154     557      232     0.267      195     
tde:TDE_0368 type I restriction-modification system, S  K01154     562      232     0.246      357     
cje:Cj1551c type I restriction enzyme S protein         K01154     380      230     0.211      398     
cro:ROD_34271 putative Type I restriction-modification  K01154     446      229     0.227      207     
lil:LA_3198 type I restriction enzyme EcoprrI specifici K01154     411      228     0.220      373     
sat:SYN_00495 type I restriction-modification system sp K01154     404      226     0.219      421     
eco:b4348 type I restriction enzyme EcoKI specificity s K01154     464      223     0.225      426     
bxe:Bxe_A0223 Putative HsdS protein                     K01154     438      222     0.252      333     
abo:ABO_1829 type I restriction-modification system, S  K01154     391      221     0.242      298     
spn:SP_0508 type I restriction-modification system, S s K01154     522      221     0.252      238     
chy:CHY_0831 putative type I restriction-modification s K01154     403      220     0.282      188     
tel:tll2229 type I site-specific deoxyribonuclease spec K01154     410      220     0.248      420     
spr:spr0448 Type I site-specific deoxyribonuclease chai K01154     522      220     0.248      238     
pjd:Pjdr2_4740 restriction modification system DNA spec K01154     456      218     0.213      404     
hin:HI_1286 type I restriction/modification specificity K01154     459      218     0.274      190     
gox:GOX2568 Type I restriction-modification enzyme S su K01154     402      217     0.227      418     
pfl:PFL_2964 putative type I restriction-modification s K01154     551      215     0.235      405     
mva:Mvan_0035 hypothetical protein                      K01154     400      214     0.294      143     
xom:XOO3269 specificity determinant for hsdM and hsdR   K01154     450      211     0.204      309     
bvu:BVU_3412 type I restriction-modification system S s K01154     430      208     0.256      180     
son:SO_0382 type I restriction-modification system rest K01154     439      208     0.231      312     
dvu:DVU_1705 type I restriction-modification enzyme, S  K01154     339      206     0.274      168     
sau:SA1625 probable specificity determinant HsdS        K01154     409      198     0.208      403     
syf:Synpcc7942_1064 type I restriction-modification     K01154     453      197     0.257      214     
syc:syc0484_c type I restriction-modification           K01154     453      197     0.257      214     
pab:PAB2150 hsdS type I restriction-modification enzyme K01154     427      197     0.243      415     
cdi:DIP2313 Putative type I restriction/modification sy K01154     414      194     0.273      139     
sro:Sros_7555 Restriction endonuclease S subunits-like  K01154     402      191     0.250      200     
mta:Moth_1671 Restriction modification system DNA speci K01154     442      187     0.209      426     
neu:NE2496 Restriction modification system, type I      K01154     547      187     0.224      393     
yps:YPTB3881 possible restriction modification enzyme   K01154     409      186     0.260      265     
ksk:KSE_67680 hypothetical protein                      K01154     465      183     0.219      425     
stm:STM4524 specificity determinant for hsdM and hsdR   K01154     469      183     0.282      206     
ftu:FTT_0523 conserved hypothetical protein             K03427     408      182     0.240      317     
lin:lin0523 similar to specificity determinant HsdS     K01154     397      182     0.267      195     
vpa:VP0387 putative HsdS polypeptide, part of CfrA fami K01154     583      179     0.305      190     
cau:Caur_1813 restriction modification system DNA speci K01154     438      178     0.249      193     
bmf:BAB2_0396 type I restriction-modification system, S K01154     407      176     0.243      189     
bme:BMEII0450 type i restriction-modification system sp K01154     407      176     0.243      189     
bps:BPSL0947 putative type I restriction enzyme specifi K01154     429      175     0.208      409     
smu:SMU_892 putative type I restriction-modification sy            603      175     0.208      341     
bms:BRA0841 type I restriction-modification system, S s K01154     407      173     0.243      189     
scl:sce5521 subunit S of type I restriction-modificatio K01154     440      170     0.258      376     
vfi:VF_A0538 type I restriction-modification system spe K01154     406      170     0.240      287     
csa:Csal_0086 restriction modification system DNA speci K01154     538      169     0.238      202     
rco:RC1348 type I restriction enzyme S subunit-like pro K01154     216      167     0.291      127     
vch:VC_1768 conserved hypothetical protein              K01154     462      166     0.206      384     
elm:ELI_1147 hypothetical protein                       K01154     415      165     0.232      405     
ctt:CtCNB1_1527 hypothetical protein                    K01154     429      165     0.230      313     
pst:PSPTO_0006 type I restriction-modification system,  K01154     435      162     0.235      319     
syn:slr6097 type I site-specific deoxyribonuclease                 394      159     0.206      360     
sno:Snov_2650 restriction modification system DNA speci K01154     392      157     0.212      405     
mge:MG_438 type I restriction modification DNA specific            383      157     0.239      364     
bja:bll5013 ORF_ID:bll5013; unknown protein             K01154     433      156     0.231      368     
bce:BC4458 Type I restriction-modification system speci K01154     414      154     0.238      298     
ana:alr3625 similar to type I site-specific deoxyribonu K01154     353      154     0.246      199     
nfa:NFA_27620 putative restriction-modification system  K01154     394      153     0.241      278     
hal:VNG_0107G type I restriction modification enzyme, S K01154     475      151     0.212      429     
bpf:BpOF4_03730 Type 1 restriction-modification system  K01154     443      150     0.195      411     
rha:RHA1_ro11152 type I restriction-modification system K01154     391      150     0.291      175     
sao:SAOUHSC_01932 type I restriction-modification syste K01154     399      150     0.210      400     
ppu:PP_4742 Type I restriction-modification system, S s K01154     576      139     0.252      127     
aci:ACIAD3431 putative type I restriction-modification  K01154     448      134     0.220      322     
nca:Noca_1106 restriction modification system DNA speci K01154     161      133     0.302      96      
cit:102616512 uncharacterized protein LOC102616512                 665      132     0.229      271     
esa:ESA_00615 hypothetical protein                      K01154     483      132     0.236      195     
reh:H16_A2609 hypothetical membrane associated protein  K03749     258      132     0.326      135     
apl:APL_0634 putative type I restriction system specifi K01154     413      131     0.244      180     
vvi:100242500 uncharacterized protein LOC100242500                 668      130     0.221      272     
afn:Acfer_1175 restriction modification system DNA spec K01154     384      128     0.208      403     
mpn:MPN_615 hypothetical protein                                   249      128     0.251      227     
cth:Cthe_1148 hypothetical protein                                 427      127     0.239      293     
ngo:NGO_02155 restriction endonuclease EcoprrI subunit             208      127     0.306      72      
sme:SMc02295 Putative specificity protein S             K01154     424      127     0.212      198     
ocu:100359126 TRPM8 channel-associated factor 3-like               635      126     0.227      401     
mgr:MGG_10657 hypothetical protein                                 544      124     0.213      207     
tex:Teth514_1221 restriction modification system DNA sp K01154     463      122     0.228      377     
fca:101093444 nuclear export mediator factor NEMF isofo K24971    1077      120     0.230      161     
ddi:DDB_G0267898 EGF-like domain-containing protein                435      120     0.218      330     
phe:Phep_0120 TonB-dependent receptor                   K02014     833      119     0.256      211     
ame:724701 protein FAN isoform X1                       K18953     897      118     0.220      246     
sil:SPO2734 type I restriction-modification system, S s K01154     434      118     0.224      201     
fvr:FVEG_12232 hypothetical protein                                653      117     0.249      257     
aor:AO090020000536 unnamed protein product; amino acid  K28671     268      117     0.313      115     
cge:100771080 nuclear export mediator factor Nemf isofo K24971    1073      116     0.230      161     
ret:RHE_CH03638 probable rhodanese-related sulfurtransf K07146     339      116     0.224      255     
mmu:66244 ribosome quality control complex subunit NEMF K24971    1064      116     0.230      161     
sly:101248928 uncharacterized protein                              660      115     0.221      276     
gmx:100781079 serine/threonine-protein phosphatase 6 re            668      115     0.211      280     
cps:CPS_3610 transcriptional regulator, LysR family                302      115     0.250      196     
rfq:117016435 eukaryotic translation initiation factor  K16194     629      114     0.230      200     
zma:100382153 uncharacterized protein LOC100382153                 408      114     0.237      240     
smo:SELMODRAFT_96259 hypothetical protein               K28083     619      113     0.260      100     
apla:101800850 condensin-2 complex subunit G2 isoform X K11492    1159      112     0.275      211     
bsu:BSU24760 RsbT co-antagonist protein RsbRD           K17763     278      112     0.259      166     
cin:100179812 probable tRNA(His) guanylyltransferase is K10761     348      111     0.239      159     
aag:5564879 RAB6A-GEF complex partner protein 2         K20477     406      111     0.303      76      
ppp:112280008 uncharacterized protein                              516      111     0.254      252     
fgr:FGSG_04786 hypothetical protein                                630      111     0.237      274     
ath:AT1G64720 Polyketide cyclase/dehydrase and lipid tr            385      111     0.252      123     
eca:ECA3120 subunit S of type I restriction-modificatio K01154     551      111     0.212      260     
sfl:SF4364 hypothetical protein                         K01154     553      111     0.225      293     
sot:102605420 3-ketoacyl-CoA synthase 2-like            K15397     445      110     0.246      289     
aga:1272908 RAB6A-GEF complex partner protein 2         K20477     429      110     0.282      110     
gga:416749 cyclin-F isoform X1                          K10289     782      110     0.244      131     
tva:4775346 protein ubiquitination                                 518      108     0.276      170     
xla:446653 arrestin domain containing 1 S homeolog      K26228     425      108     0.242      149     
mtr:25493224 PAP-specific phosphatase HAL2-like         K01082     450      106     0.223      211     
pam:PANA_3286 Hypothetical Protein                                 255      106     0.232      164     
tca:662062 lysophospholipid acyltransferase 7           K13516     472      106     0.227      229     
lcb:LCABL_22710 HsdS                                    K01154     190      105     0.225      191     
pdi:BDI_1047 conserved hypothetical protein             K03744     195      105     0.271      96      
osa:4342587 uncharacterized protein                                442      105     0.308      78      
ptr:750255 LOW QUALITY PROTEIN: uncharacterized protein            168      105     0.311      90      
rcu:8288867 uncharacterized protein LOC8288867                     428      104     0.276      105     
nta:107779222 uncharacterized protein LOC107779222                 425      103     0.269      108     
cre:CHLRE_11g467736v5 uncharacterized protein                      274      103     0.258      194     
cjc:118148932 LOW QUALITY PROTEIN: uncharacterized prot            168      102     0.302      86      
mdm:103446577 uncharacterized protein                              369      102     0.243      185     
mcc:106997155 LOW QUALITY PROTEIN: uncharacterized prot            167      101     0.300      90      
cac:CA_C3069 Predicted glycosyltransferase                         299      101     0.285      137     
dne:112980640 carbohydrate sulfotransferase 8-like                 314      100     0.232      164     
tru:101066253 protein FAM3A isoform X1                             230      100     0.229      223     
dre:333974 glutamate--cysteine ligase regulatory subuni K11205     273      100     0.279      86      
pti:PHATR_37030 hypothetical protein                               290       99     0.306      72      
yli:2905888 Hypothetical protein                                   251       99     0.244      193     
ehi:EHI_129730 protein kinase rad3                                 255       99     0.245      110     
lpn:lpg1326 hypothetical protein                                   361       98     0.217      120     
pfr:PFREUD_01250 Methylase_S, type I restriction enzyme             92       97     0.364      66      
ptex:113448769 magnesium-dependent phosphatase 1 isofor K17619     169       96     0.292      96      
xtr:100124883 tRNA-splicing endonuclease subunit Sen15  K15324     168       96     0.216      116     
tps:THAPSDRAFT_264177 prolyl 4-hydroxylase alpha subuni K00472     206       95     0.394      71      
nve:5510638 LOW QUALITY PROTEIN: lysine-specific demeth            239       95     0.265      102     
dsy:DSY1687 hypothetical protein                                   194       95     0.256      133     
ser:SERP2473 hypothetical protein                                  228       95     0.228      149     
tgo:7897802 hypothetical protein                                   133       94     0.230      100     
mdo:103102545 CD70 molecule                             K05470     208       92     0.288      66      
pfa:PF3D7_0526900 transmembrane emp24 domain-containing K20346     214       91     0.268      112     
pai:PAE0927 hypothetical protein                                   168       91     0.252      123     
ssc:100523569 transmembrane protein 89                             156       90     0.220      127     
wol:WD_1053 conserved hypothetical protein              K07323     196       89     0.243      74      
cel:CELE_T19E7.6 SCP2_2 domain-containing protein                  124       85     0.283      92      
clv:102096828 vacuolar protein-sorting-associated prote             77       83     0.358      53      
bma:BMA1127 hypothetical protein                                    40       75     0.667      15      

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