SSDB Best Search Result

Entry:nit:NAL212_0223 (575 a.a.)
Name:restriction modification system DNA specificity domain
KO:K01154 type I restriction enzyme, S subunit

Search Result : 165 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
afr:AFE_0686 type I restriction-modification system, S  K01154     561     1341     0.440      579     
ecs:ECs_5306 restriction-modification system protein Hs K01154     584     1317     0.406      589     
sfl:SF4364 hypothetical protein                         K01154     553     1259     0.410      575     
vvu:VV1_2030 Restriction endonuclease S subunit         K01154     560     1229     0.396      578     
vpa:VP0387 putative HsdS polypeptide, part of CfrA fami K01154     583     1106     0.361      596     
cja:CJA_0636 type I restriction-modification system, S  K01154     795     1004     0.356      567     
ppu:PP_4742 Type I restriction-modification system, S s K01154     576      933     0.375      571     
ava:Ava_3267 Restriction modification system DNA specif K01154     557      858     0.314      551     
eca:ECA3120 subunit S of type I restriction-modificatio K01154     551      817     0.324      599     
rcp:RCAP_rcc01326 type I restriction-modification syste K01154     560      727     0.312      552     
dde:Dde_2496 restriction modification system DNA specif K01154     565      706     0.304      565     
ana:alr3625 similar to type I site-specific deoxyribonu K01154     353      676     0.339      348     
spr:spr0448 Type I site-specific deoxyribonuclease chai K01154     522      602     0.287      568     
ral:Rumal_3906 restriction modification system DNA spec K01154     536      558     0.290      580     
tde:TDE_2744 type I restriction-modification system, S  K01154     532      515     0.266      582     
bth:BT_4520 putative type I restriction enzyme S.BthVOR K01154     474      509     0.268      538     
spn:SP_0508 type I restriction-modification system, S s K01154     522      486     0.258      573     
bvu:BVU_4161 type I restriction enzyme EcoAI specificit K01154     449      469     0.290      525     
stm:STM4524 specificity determinant for hsdM and hsdR   K01154     469      388     0.290      283     
cro:ROD_33371 putative type I restriction modification  K01154     538      369     0.257      467     
gtn:GTNG_0763 Putative type I specificity subunit HsdS  K01154     509      353     0.227      506     
son:SO_4264 type I restriction-modification system rest K01154     495      313     0.245      413     
csa:Csal_0086 restriction modification system DNA speci K01154     538      303     0.246      520     
mmg:MTBMA_c14710 predicted type I restriction-modificat K01154     435      273     0.276      297     
mba:Mbar_A3272 type I restriction-modification system s K01154     492      273     0.209      506     
mja:MJ_1218 type I restriction-modification enzyme 1, S K01154     425      261     0.332      187     
npu:Npun_F4901 restriction modification system DNA spec K01154     530      251     0.219      508     
mac:MA_2120 type I site-specific deoxyribonuclease      K01154     487      251     0.260      512     
pjd:Pjdr2_4740 restriction modification system DNA spec K01154     456      242     0.299      204     
hal:VNG_0107G type I restriction modification enzyme, S K01154     475      239     0.279      204     
mma:MM_1667 type I restriction-modification system spec K01154     412      232     0.226      393     
reh:H16_A0005 Type I restriction-modification system sp K01154     422      228     0.245      453     
sty:STY4881 subunit S of type I restriction-modificatio K01154     462      214     0.241      203     
zga:ZOBELLIA_2696 Type I restriction enzyme ZgaDI, S su K01154     468      202     0.220      478     
hth:HTH_0018 restriction endonuclease S subunit         K01154     426      196     0.254      197     
tte:TTE1545 Restriction endonuclease S subunits         K01154     398      189     0.275      229     
xom:XOO3269 specificity determinant for hsdM and hsdR   K01154     450      182     0.307      153     
cje:Cj1051c restriction modification enzyme                       1339      181     0.199      528     
nmr:Nmar_0607 restriction modification system DNA speci K01154     438      174     0.218      211     
aci:ACIAD3431 putative type I restriction-modification  K01154     448      173     0.260      200     
alv:Alvin_3177 restriction modification system DNA spec K01154     448      172     0.243      272     
eco:b4348 type I restriction enzyme EcoKI specificity s K01154     464      170     0.221      172     
sno:Snov_2663 Restriction endonuclease S subunits-like  K01154     506      163     0.208      356     
anb:ANA_C10111 type I restriction enzyme                K01154     470      158     0.243      189     
tel:tll2229 type I site-specific deoxyribonuclease spec K01154     410      155     0.227      255     
xau:Xaut_1095 restriction modification system DNA speci K01154     450      154     0.518      56      
zmo:ZMO0946 trigger factor                              K03545     492      154     0.278      284     
bja:bll5013 ORF_ID:bll5013; unknown protein             K01154     433      154     0.212      316     
bpf:BpOF4_03730 Type 1 restriction-modification system  K01154     443      151     0.196      276     
rle:RL1097 putative type I restriction enzyme specifici K01154     456      151     0.251      231     
cth:Cthe_1144 restriction modification system DNA speci K01154     473      150     0.273      150     
sau:SA1625 probable specificity determinant HsdS        K01154     409      150     0.254      193     
sao:SAOUHSC_01932 type I restriction-modification syste K01154     399      148     0.242      194     
mpn:MPN_034 DNA polymerase III (dnaE) alpha chain       K03763    1443      147     0.214      548     
mtr:11420805 probable transmembrane GTPase FZO-like, ch            914      142     0.202      499     
llm:llmg_0660 probable specificity determinant HsdS     K01154     416      142     0.263      194     
abo:ABO_1829 type I restriction-modification system, S  K01154     391      141     0.197      183     
tre:TRIREDRAFT_111681 hypothetical protein                         868      139     0.247      279     
esa:ESA_00615 hypothetical protein                      K01154     483      139     0.222      356     
hin:HI_1286 type I restriction/modification specificity K01154     459      139     0.213      381     
ccr:CC_0621 type I restriction-modification system, S s K01154     450      139     0.192      276     
vg:310609533 Yasminevirus sp. GU-2018; putative DNA N6-           1006      137     0.217      166     
gmx:100785233 probable transmembrane GTPase FZO-like, c            914      137     0.211      497     
hpj:jhp_1422 putative TYPE I RESTRICTION ENZYME (SPECIF K01154     624      137     0.255      204     
syn:sll8006 type I restriction-modification system S su K01154     464      136     0.228      324     
uma:UMAG_12250 hypothetical protein                               1119      135     0.232      327     
smm:Smp_057320 putative vesicular-fusion protein nsf    K06027     743      134     0.230      257     
dvu:DVU_1705 type I restriction-modification enzyme, S  K01154     339      134     0.222      315     
bce:BC4458 Type I restriction-modification system speci K01154     414      133     0.216      264     
scl:sce5521 subunit S of type I restriction-modificatio K01154     440      131     0.231      360     
eba:p2A50 Type I restriction-modification system (speci K01154     408      130     0.225      249     
pto:PTO0077 type I restriction-modification system spec K01154     441      130     0.236      212     
bfr:BF1024 conserved hypothetical protein                          517      129     0.235      281     
pmur:107292619 retinoic acid receptor RXR-alpha         K08524     432      128     0.235      230     
lcb:LCABL_22730 Type I R/M system specificity subunit   K01154     426      128     0.233      202     
xac:XAC2899 type I restriction-modification system spec K01154     426      128     0.217      383     
tgo:7893835 phenylalanine--tRNA ligase, beta subunit pr            675      127     0.216      245     
osa:4344549 serine/threonine protein phosphatase 2A 57  K11584     516      127     0.230      282     
dne:112979897 retinoic acid receptor RXR-alpha isoform  K08524     439      126     0.230      222     
amj:102567277 retinoid X receptor alpha                 K08524     439      126     0.230      222     
clv:102098621 retinoic acid receptor RXR-alpha          K08524     439      126     0.230      222     
apla:101794030 retinoic acid receptor RXR-alpha         K08524     467      126     0.230      222     
enc:ECL_00870 3-isopropylmalate dehydratase, large subu K01703     466      126     0.205      297     
rcu:8282540 serine/threonine protein phosphatase 2A 59  K11584     544      126     0.236      314     
ame:551261 plasma membrane calcium-transporting ATPase  K05850    1253      126     0.234      316     
mar:MAE_55980 Type I restriction enzyme EcoEI M protein K03427     677      126     0.206      378     
gga:417143 retinoic acid receptor RXR-alpha isoform X1  K08524     467      126     0.230      222     
pma:Pro_0707 Restriction endonuclease S subunit         K01154     425      126     0.259      166     
ptex:113448479 retinoic acid receptor RXR-alpha isoform K08524     480      125     0.225      222     
vvi:100258598 serine/threonine protein phosphatase 2A 5 K11584     548      125     0.237      228     
xla:108704767 vomeronasal type-2 receptor 116           K04613     820      125     0.230      326     
cne:CNK00980 expressed protein                          K10882     539      125     0.226      305     
ssy:SLG_30810 putative M13 family peptidase             K07386     699      124     0.213      409     
mcc:717956 serine/threonine-protein kinase ULK4 isoform K17545    1274      124     0.225      355     
cfa:491278 retinoic acid receptor RXR-alpha isoform X1  K08524     439      124     0.234      222     
xtr:100487877 retinoic acid receptor RXR-alpha isoform  K08524     479      124     0.230      222     
cpoc:100728437 retinoic acid receptor RXR-alpha isoform K08524     439      123     0.225      222     
rfq:117036745 thioredoxin domain-containing protein 6 i K19869     334      123     0.258      155     
cge:100768377 retinoic acid receptor RXR-alpha isoform  K08524     467      123     0.230      222     
hsa:6256 retinoic acid receptor RXR-alpha isoform a     K08524     462      123     0.230      222     
tgu:100231066 retinoic acid receptor RXR-alpha          K08524     467      123     0.230      222     
mdo:100019466 retinoid X receptor alpha                 K08524     467      123     0.230      222     
sen:SACE_0869 putative restriction modification system  K01154     411      123     0.196      194     
ptr:464834 retinoic acid receptor RXR-alpha isoform X1  K08524     462      123     0.230      222     
mmu:20181 retinoic acid receptor RXR-alpha isoform 1    K08524     467      123     0.230      222     
rno:25271 retinoic acid receptor RXR-alpha              K08524     467      123     0.230      222     
rco:RC1348 type I restriction enzyme S subunit-like pro K01154     216      123     0.235      149     
bmor:101746508 gastrula zinc finger protein xFG20-1     K09228     906      122     0.223      265     
cst:CLOST_1969 Restriction modification system DNA spec K01154     405      122     0.213      287     
tva:5466876 armadillo (ARM) repeat-containing protein f           1504      122     0.210      248     
ssc:100738818 thioredoxin domain-containing protein 6 i K19869     410      122     0.240      175     
sme:SMc02295 Putative specificity protein S             K01154     424      122     0.221      199     
fca:101085757 retinoic acid receptor RXR-alpha isoform  K08524     476      121     0.230      222     
smo:SELMODRAFT_77626 hypothetical protein               K20306    1091      121     0.257      171     
kfl:Kfla_4155 hypothetical protein                                 770      121     0.242      120     
cdi:DIP2313 Putative type I restriction/modification sy K01154     414      121     0.243      189     
ppa:PAS_chr4_0956 hypothetical protein                  K02895     310      120     0.255      137     
tca:658988 aryl hydrocarbon receptor nuclear translocat K09097     689      120     0.237      194     
nve:5515515 ankyrin repeat and LEM domain-containing pr K21412     776      120     0.259      166     
mdm:103425528 geraniol 8-hydroxylase-like                          500      119     0.249      177     
cit:102620041 serine/threonine protein phosphatase 2A 5 K11584     534      119     0.240      267     
dre:558865 WD repeat-containing protein 11              K24260    1239      119     0.210      353     
sso:SSO2373 Conserved hypothetical protein              K06961     189      119     0.278      169     
cte:CT0679 type I restriction system specificity protei K01154     444      119     0.249      221     
aga:1280702 glutamate receptor ionotropic, delta-1      K05313     658      118     0.234      214     
sshi:J5U23_01221 Putative RNA-binding protein           K06961     189      117     0.275      193     
cjc:100407498 retinoic acid receptor RXR-alpha isoform  K08524     468      117     0.225      222     
ksk:KSE_67680 hypothetical protein                      K01154     465      117     0.169      236     
bta:507554 retinoic acid receptor RXR-alpha             K08524     439      117     0.225      222     
dme:Dmel_CG10833 cytochrome P450 28d1                   K15005     502      117     0.241      274     
oas:101111845 retinoic acid receptor RXR-gamma isoform  K08526     463      116     0.222      198     
ola:100125533 retinoic acid receptor RXR-gamma-B        K08526     455      116     0.207      241     
aor:AO090138000147 unnamed protein product; predicted p            729      116     0.241      344     
syf:Synpcc7942_1064 type I restriction-modification     K01154     453      116     0.211      246     
yps:YPTB0536 putative type I restriction enzyme, S subu K01154     427      116     0.249      213     
syc:syc0484_c type I restriction-modification           K01154     453      116     0.211      246     
ppp:112281009 uncharacterized protein                              340      115     0.255      137     
rer:RER_24580 probable signal peptidase I               K03100     258      114     0.255      165     
cal:CAALFM_C201490CA TFIIH/NER complex subunit          K03142     472      114     0.227      401     
pst:PSPTO_1087 type I restriction-modification system,  K01154     422      114     0.222      279     
fvr:FVEG_01477 alternative oxidase, mitochondrial                  353      113     0.202      248     
aag:5565854 serine--tRNA ligase, cytoplasmic            K01875     500      113     0.276      163     
psb:Psyr_4293 Acyl-CoA thioesterase                     K10805     289      113     0.282      181     
ath:AT1G75430 BEL1-like homeodomain 11                             290      113     0.250      96      
fgr:FGSG_01342 alternative oxidase                                 353      111     0.206      243     
mgr:MGG_03208 glycolipid-anchored surface protein 5     K22832     437      111     0.235      115     
rha:RHA1_ro11013 conserved hypothetical protein                    417      111     0.221      272     
fps:FP0366 Probable glycosyl transferase                           348      110     0.239      230     
spo:2539730 U2 snRNP-associated protein Lea1            K11092     237      110     0.284      95      
ctt:CtCNB1_2611 DNA polymerase V                        K03503     136      109     0.259      81      
azc:AZC_3113 putative glycosyltransferase                          336      109     0.254      142     
pif:PITG_14006 N-acetyltransferase, putative                       166      108     0.237      131     
ehi:EHI_096540 hypothetical protein                                332      108     0.235      132     
spy:SPy_1254 hypothetical protein                                  198      108     0.279      122     
sot:107058479 uncharacterized LOC107058479                         158      107     0.234      171     
nta:142177251 uncharacterized protein LOC142177251                 169      106     0.255      106     
nca:Noca_1106 restriction modification system DNA speci K01154     161      106     0.242      99      
afm:AFUA_7G02220 hypothetical protein                              276      104     0.225      236     
tbr:Tb927.8.2500 ribosomal RNA methyltransferase, putat K02427     255      102     0.267      180     
cre:CHLRE_05g234637v5 ribosomal protein S15a            K02957     130      101     0.278      97      
afn:Acfer_1174 restriction modification system DNA spec            168      100     0.237      177     
zma:103638773 40S ribosomal protein S15a-1              K02957     130      100     0.295      105     
sly:101247608 small ribosomal subunit protein uS8z/uS8w K02957     130       97     0.279      104     
gvi:gsl1825 ORF_ID:gsl1825; hypothetical protein                    91       93     0.311      90      
hpy:HP_0849 predicted coding region HP0849                          96       93     0.272      81      

[ SSDB | GENES | KEGG2 | KEGG | GenomeNet ]