SSDB Best Search Result

Entry:ppt:PPS_4001 (201 a.a.)
Name:Holliday junction DNA helicase RuvA
KO:K03550 holliday junction DNA helicase RuvA

Search Result : 227 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
ppu:PP_1216 Holliday junction ATP-dependent DNA helicas K03550     205     1241     0.975      201     
psb:Psyr_1409 Holliday junction DNA helicase subunit Ru K03550     202     1065     0.828      198     
pst:PSPTO_3978 Holliday junction DNA helicase RuvA      K03550     202     1064     0.828      198     
pfl:PFL_4764 Holliday junction DNA helicase RuvA        K03550     202     1061     0.827      202     
pae:PA0966 Holliday junction ATP-dependent DNA helicase K03550     201     1043     0.809      199     
avn:Avin_36700 holliday junction DNA helicase RuvA      K03550     204      966     0.750      200     
abo:ABO_0752 Holliday junction DNA helicase RuvA        K03550     201      742     0.545      198     
vch:VC_1846 Holliday junction DNA helicase RuvA         K03550     204      731     0.537      203     
vpa:VP1051 holliday junction DNA helicase RuvA          K03550     204      727     0.545      202     
csa:Csal_1847 Holliday junction DNA helicase subunit Ru K03550     206      719     0.579      197     
vvu:VV1_2159 Holliday junction DNA helicase RuvA        K03550     204      717     0.547      203     
cja:CJA_1030 Holliday junction DNA helicase RuvA        K03550     205      715     0.537      203     
son:SO_2430 Holliday junction DNA helicase RuvA         K03550     205      715     0.564      204     
vfi:VF_0951 component of RuvABC resolvasome, regulatory K03550     207      705     0.537      205     
smar:SM39_2251 component of RuvABC resolvasome, regulat K03550     204      696     0.547      203     
hel:HELO_2561 Holliday junction ATP-dependent DNA helic K03550     203      696     0.538      197     
yps:YPTB2040 Holliday junction DNA helicase             K03550     226      681     0.527      203     
ypk:y2253 Holliday junction helicase subunit B          K03550     226      681     0.527      203     
ype:YPO2057 Holliday junction DNA helicase              K03550     204      681     0.527      203     
esa:ESA_01380 hypothetical protein                      K03550     203      674     0.530      202     
enc:ECL_01437 Holliday junction DNA helicase RuvA       K03550     204      672     0.542      203     
yen:YE2393 Holliday junction DNA helicase               K03550     205      672     0.515      204     
cps:CPS_2116 Holliday junction DNA helicase RuvA        K03550     211      671     0.505      210     
ecs:ECs_2571 component of RuvABC resolvasome regulatory K03550     203      671     0.530      202     
eco:b1861 Holliday junction branch migration complex su K03550     203      671     0.530      202     
plu:plu2111 Holliday junction DNA helicase              K03550     205      668     0.515      204     
sfl:SF1871 Holliday junction DNA helicase RuvA          K03550     203      666     0.525      202     
eca:ECA2492 holliday junction DNA helicase              K03550     205      661     0.515      204     
pam:PANA_2201 RuvA                                      K03550     204      659     0.507      203     
ddd:Dda3937_01621 component of RuvABC resolvasome, regu K03550     205      658     0.510      204     
eam:EAMY_2064 Holliday junction ATP-dependent DNA helic K03550     204      658     0.517      203     
pmr:PMI1115 Holliday junction ATP-dependent DNA helicas K03550     207      658     0.505      206     
hin:HI_0313 Holliday junction DNA helicase (ruvA)       K03550     204      658     0.528      199     
cro:ROD_19031 holliday junction ATP-dependent DNA helic K03550     203      656     0.515      202     
kpn:KPN_02376 Holliday junction DNA helicase motor prot K03550     203      654     0.510      202     
sty:STY2103 Holliday junction DNA helicase              K03550     203      654     0.505      202     
stm:STM1895 Holliday junction helicase subunit A        K03550     203      654     0.505      202     
apl:APL_0283 holliday junction ATP-dependent DNA helica K03550     201      648     0.533      197     
mca:MCA1222 Holliday junction DNA helicase RuvA         K03550     201      642     0.502      201     
alv:Alvin_0155 Holliday junction DNA helicase RuvA      K03550     211      638     0.481      206     
pmu:PM0977 RuvA                                         K03550     204      636     0.500      202     
hdu:HD_1758 Holliday junction DNA helicase RuvA         K03550     201      626     0.505      196     
cvi:CV_4223 holliday junction DNA helicase              K03550     197      603     0.472      199     
afr:AFE_0061 Holliday junction DNA helicase RuvA        K03550     193      601     0.470      198     
bma:BMA2354 Holliday junction DNA helicase RuvA         K03550     193      590     0.515      198     
bps:BPSL2898 holliday junction DNA helicase             K03550     193      590     0.515      198     
brh:RBRH_02062 Holliday junction DNA helicase ruvA      K03550     193      587     0.492      197     
neu:NE0212 probable Holliday junction DNA helicase subu K03550     195      584     0.472      199     
reu:Reut_A0484 Holliday junction DNA helicase subunit R K03550     193      583     0.480      196     
cdn:BN940_14571 Holliday junction DNA helicase RuvA     K03550     194      582     0.475      198     
reh:H16_A0498 holliday junction resolvasome, DNA-bindin K03550     193      579     0.482      197     
bxe:Bxe_A0616 DNA recombination protein, RuvA           K03550     193      578     0.497      197     
rso:RSc0501 probable holliday junction dna helicase ruv K03550     193      574     0.474      196     
lpn:lpg1288 Holliday junction DNA helicase RuvA         K03550     199      571     0.436      202     
bpe:BP3418 holliday junction DNA helicase               K03550     190      568     0.482      199     
eba:ebA3959 Holliday junction DNA helicase              K03550     199      567     0.438      201     
sml:Smlt3711 putative Holliday junction DNA helicase    K03550     197      564     0.462      199     
aci:ACIAD2614 holliday junction helicase subunit A      K03550     204      563     0.465      198     
acb:A1S_2587 holliday junction helicase subunit A       K03550     199      562     0.488      203     
ctt:CtCNB1_4290 Holliday junction DNA helicase RuvA     K03550     191      561     0.455      198     
nme:NMB0265 Holliday junction DNA helicase RuvA         K03550     194      556     0.442      199     
ngo:NGO_1730 ATP-dependent DNA helicase RuvA            K03550     194      549     0.437      199     
xcc:XCC3025 holliday junction binding protein, DNA heli K03550     194      544     0.455      202     
xac:XAC3149 holliday junction binding protein DNA helic K03550     194      544     0.457      199     
xom:XOO1545 holliday junction binding protein DNA helic K03550     194      543     0.457      199     
ftu:FTT_0658 holliday junction DNA helicase, subunit A  K03550     217      533     0.410      210     
xfa:XF_1904 holliday junction binding protein, DNA heli K03550     194      516     0.436      202     
sat:SYN_02972 holliday junction DNA helicase            K03550     204      479     0.364      198     
cpy:Cphy_1333 Holliday junction DNA helicase RuvA       K03550     203      478     0.372      199     
gme:Gmet_0745 Holliday junction DNA helicase RuvA       K03550     199      474     0.390      200     
gsu:GSU1076 Holliday junction DNA helicase RuvA         K03550     199      474     0.382      199     
mxa:MXAN_4972 Holliday junction DNA helicase RuvA       K03550     202      459     0.430      200     
syf:Synpcc7942_2298 Holliday junction DNA helicase subu K03550     207      459     0.389      203     
syc:syc1802_c holliday junction DNA helicase RuvA       K03550     207      459     0.389      203     
dsy:DSY2467 hypothetical protein                        K03550     201      456     0.377      199     
sur:STAUR_5780 Holliday junction ATP-dependent DNA heli K03550     203      447     0.419      198     
elm:ELI_3657 Holliday junction DNA helicase RuvA        K03550     203      441     0.370      200     
azc:AZC_0515 DNA recombination protein                  K03550     206      440     0.432      199     
gtn:GTNG_2522 Holliday junction DNA helicase RuvA       K03550     194      439     0.368      201     
sjp:SJA_C1-00990 Holliday junction resolvasome DNA-bind K03550     202      437     0.439      198     
cth:Cthe_0181 Holliday junction DNA helicase RuvA       K03550     202      433     0.364      198     
cte:CT0262 Holliday junction DNA helicase RuvA          K03550     201      433     0.398      196     
ssy:SLG_00290 Holliday junction ATP-dependent DNA helic K03550     205      431     0.399      198     
tel:tlr0532 Holliday junction DNA helicase              K03550     210      428     0.446      184     
cau:Caur_1418 Holliday junction DNA helicase RuvA       K03550     195      424     0.383      196     
pdi:BDI_2660 Holliday junction DNA helicase RuvA        K03550     196      424     0.388      201     
npu:Npun_R3568 Holliday junction DNA helicase RuvA      K03550     228      423     0.380      187     
ana:all0375 holliday junction DNA helicase              K03550     213      421     0.380      187     
xau:Xaut_3067 Holliday junction DNA helicase RuvA       K03550     205      419     0.389      198     
anb:ANA_C12944 Holliday junction DNA helicase RuvA      K03550     213      418     0.369      187     
ava:Ava_2820 Holliday junction DNA helicase subunit Ruv K03550     213      418     0.374      187     
bja:blr1536 holliday junction DNA helicase              K03550     205      418     0.397      199     
cpe:CPE1948 holliday junction DNA helicase              K03550     201      418     0.367      199     
rpa:TX73_005655 Holliday junction branch migration prot K03550     205      416     0.397      199     
lla:L0266 DNA helicase RuvA                             K03550     197      415     0.357      199     
scl:sce0297 holliday junction DNA helicase              K03550     244      414     0.400      200     
llm:llmg_2488 holliday junction DNA helicase ruvA       K03550     197      412     0.352      199     
swi:Swit_2140 Holliday junction DNA helicase RuvA       K03550     199      411     0.389      198     
det:DET0442 Holliday junction DNA helicase RuvA         K03550     194      411     0.372      196     
mea:Mex_1p0739 Holliday junction ATP-dependent DNA heli K03550     208      410     0.412      204     
gvi:glr2884 ORF_ID:glr2884                              K03550     206      409     0.377      204     
sao:SAOUHSC_01751 Holliday junction DNA helicase RuvA   K03550     200      407     0.337      205     
tte:TTE1179 Holliday junction resolvasome DNA-binding s K03550     187      407     0.354      198     
bmf:BAB1_1715 Bacterial DNA recombination protein, RuvA K03550     205      405     0.409      198     
bms:BR1703 Holliday junction DNA helicase RuvA          K03550     205      405     0.409      198     
bme:BMEI0333 holliday junction DNA helicase ruva        K03550     205      405     0.409      198     
pjd:Pjdr2_4401 Holliday junction DNA helicase RuvA      K03550     212      404     0.338      207     
tfu:Tfu_2094 Holliday junction DNA helicase subunit Ruv K03550     202      404     0.389      198     
sct:SCAT_5304 Holliday junction ATP-dependent DNA helic K03550     207      402     0.443      183     
sme:SMc03966 Probable holliday junction DNA helicase    K03550     205      402     0.405      200     
mlo:mll3898 Holliday branch migration protein; RuvA     K03550     206      402     0.407      199     
gpo:GPOL_c22060 holliday junction ATP-dependent DNA hel K03550     198      401     0.388      196     
mar:MAE_10280 holliday junction DNA helicase            K03550     209      401     0.376      205     
dde:Dde_2323 Holliday junction DNA helicase RuvA        K03550     201      399     0.400      200     
pde:Pden_0695 Holliday junction DNA helicase RuvA       K03550     223      398     0.381      218     
nar:Saro_0422 Holliday junction DNA helicase RuvA       K03550     204      398     0.420      200     
sau:SA1468 holliday junction DNA helicase               K03550     200      397     0.332      205     
tex:Teth514_1453 Holliday junction DNA helicase RuvA    K03550     187      396     0.357      199     
sgu:SGLAU_06125 Holliday junction ATP-dependent DNA hel K03550     201      391     0.414      181     
rle:RL3989 putative Holliday junction DNA helicase      K03550     204      391     0.404      198     
sco:SCO1519 holliday junction DNA helicase              K03550     201      390     0.409      181     
bsu:BSU27740 holliday junction ATP-dependent DNA helica K03550     201      389     0.303      201     
fps:FP2122 Holliday junction DNA helicase RuvA          K03550     193      388     0.317      199     
ret:RHE_CH03481 holliday junction DNA helicase protein  K03550     204      388     0.399      198     
zga:ZOBELLIA_2376 Holliday junction DNA helicase        K03550     193      387     0.328      201     
cdf:CD630_28060 Holliday junction ATP-dependent DNA hel K03550     200      387     0.345      203     
zmo:ZMO0155 Holliday junction DNA helicase RuvA         K03550     213      386     0.368      204     
cbo:CBO3071 holliday junction DNA helicase              K03550     197      385     0.342      202     
ttm:Tthe_1567 Holliday junction DNA helicase RuvA       K03550     188      384     0.312      199     
sno:Snov_3048 Holliday junction DNA helicase RuvA       K03550     205      384     0.392      199     
dra:DR_1274 Holliday junction binding protein           K03550     201      384     0.391      197     
bfr:BF3689 Holliday junction DNA helicase RuvA          K03550     201      383     0.345      197     
cdi:DIP1376 holliday junction DNA-helicase              K03550     203      380     0.355      203     
bce:BC4415 Holliday junction DNA helicase ruvA          K03550     205      380     0.342      193     
bha:BH1224 holliday junction DNA helicase               K03550     203      380     0.324      204     
btk:BT9727_4154 holliday junction DNA helicase          K03550     205      379     0.342      193     
ban:BA_4651 Holliday junction DNA helicase RuvA         K03550     205      379     0.342      193     
atu:Atu3723 Holliday junction DNA helicase RuvA         K03550     205      379     0.387      199     
ser:SERP1206 Holliday junction DNA helicase RuvA        K03550     200      378     0.317      202     
bhe:BH14900 Holliday junction DNA helicase ruvA         K03550     205      378     0.365      200     
bth:BT_1978 Holliday junction DNA helicase ruvA         K03550     201      378     0.355      197     
cac:CA_C2285 Holliday junction specific DNA helicase, s K03550     201      378     0.332      199     
nfa:NFA_36960 putative Holliday junction DNA helicase B K03550     201      377     0.346      179     
oih:OB2037 holliday junction DNA helicase               K03550     201      377     0.327      199     
cpn:CPn_0620 Holliday Junction Helicase                 K03550     207      374     0.365      200     
phe:Phep_3832 Holliday junction DNA helicase RuvA       K03550     194      373     0.359      198     
bpf:BpOF4_11660 Holliday junction DNA helicase RuvA     K03550     205      372     0.328      204     
syp:SYNPCC7002_A1270 Holliday junction DNA helicase Ruv K03550     209      372     0.362      188     
efa:EF0066 Holliday junction DNA helicase RuvA          K03550     204      372     0.308      201     
syn:sll0876 Holliday junction DNA helicase; RuvA        K03550     211      372     0.399      178     
ccyc:SCMU_22050 Holliday junction ATP-dependent DNA hel K03550     213      371     0.383      209     
rru:Rru_A1088 DNA recombination protein RuvA            K03550     212      371     0.389      193     
cst:CLOST_1317 component of RuvABC resolvasome, regulat K03550     199      368     0.337      190     
mmi:MMAR_2110 Holliday junction DNA helicase RuvA       K03550     197      368     0.360      200     
mul:MUL_1715 Holliday junction DNA helicase RuvA        K03550     197      368     0.360      200     
amd:AMED_5300 holliday junction DNA helicase RuvA       K03550     198      367     0.354      192     
kfl:Kfla_4404 Holliday junction DNA helicase RuvA       K03550     199      367     0.385      200     
rha:RHA1_ro06893 holliday junction DNA helicase         K03550     200      367     0.343      201     
rsp:RSP_0555 Holliday junction DNA helicase subunit Ruv K03550     224      367     0.346      217     
rcp:RCAP_rcc03217 holliday junction DNA helicase RuvA   K03550     222      366     0.352      216     
sma:SAVERM_6834 putative Holliday junction DNA helicase K03550     203      366     0.385      182     
wsu:WS0440 PUTATIVE HOLLIDAY JUNCTION DNA HELICASE      K03550     189      365     0.373      201     
stp:Strop_1809 Holliday junction DNA helicase subunit R K03550     200      362     0.381      189     
pgi:PG_0811 Holliday junction DNA helicase RuvA         K03550     202      362     0.350      200     
ctr:CT_501 Holliday junction DNA helicase RuvA          K03550     200      362     0.321      184     
ctb:CTL0763 holliday junction DNA helicase              K03550     200      361     0.321      184     
nca:Noca_2386 Holliday junction DNA helicase subunit Ru K03550     200      361     0.353      201     
sro:Sros_6112 Holliday junction DNA helicase subunit Ru K03550     206      360     0.379      190     
sil:SPO3116 Holliday junction DNA helicase RuvA         K03550     224      360     0.347      219     
pfr:PFREUD_11710 Holliday junction ATP-dependent DNA he K03550     203      359     0.373      201     
dds:Ddes_1268 Holliday junction DNA helicase RuvA       K03550     204      358     0.360      200     
cgl:Cgl1661 Holliday junction resolvasome DNA-binding s K03550     206      356     0.395      185     
rer:RER_29240 Holliday junction DNA helicase RuvA       K03550     199      353     0.323      201     
afn:Acfer_1529 Holliday junction DNA helicase RuvA      K03550     204      350     0.355      183     
mab:MAB_2883c Holliday junction DNA helicase RuvA       K03550     202      350     0.330      194     
dvu:DVU_2256 Holliday junction DNA helicase RuvA        K03550     202      350     0.400      180     
chy:CHY_1523 Holliday junction DNA helicase RuvA        K03550     195      347     0.327      196     
ksk:KSE_14440 putative Holliday junction ATP-dependent  K03550     203      346     0.393      191     
lba:Lebu_1880 Holliday junction DNA helicase RuvA       K03550     207      346     0.322      177     
sgr:SGR_6016 putative Holliday junction DNA helicase su K03550     208      346     0.392      181     
ral:Rumal_2564 Holliday junction DNA helicase RuvA      K03550     199      344     0.370      200     
spy:SPy_2119 putative Holiday junction DNA helicase     K03550     198      343     0.302      199     
spr:spr0165 Holliday junction DNA helicase              K03550     197      342     0.309      204     
sen:SACE_2022 Holliday junction DNA helicase            K03550     200      339     0.330      203     
spn:SP_0179 Holliday junction DNA helicase RuvA         K03550     197      338     0.305      203     
ccr:CC_3237 Holliday junction DNA helicase RuvA         K03550     205      338     0.365      200     
ljo:LJ_0467 Holliday junction DNA helicase RuvA         K03550     192      337     0.297      202     
mle:ML0482 Holliday junction DNA helicase component     K03550     203      337     0.326      181     
lmo:lmo1533 Holliday junction DNA helicase RuvA         K03550     201      337     0.310      203     
ase:ACPL_6534 Holliday junction ATP-dependent DNA helic K03550     200      336     0.346      179     
bvu:BVU_1658 Holliday junction DNA helicase ruvA        K03550     197      336     0.320      197     
lcb:LCABL_08330 Holliday junction ATP-dependent DNA hel K03550     198      333     0.306      196     
blo:BL0728 probable holliday junction DNA helicase RuvA K03550     208      333     0.328      177     
msm:MSMEG_2944 holliday junction DNA helicase RuvA      K03550     195      332     0.330      203     
gox:GOX1681 Holliday junction DNA helicase RuvA         K03550     200      332     0.347      199     
mtu:Rv2593c Holliday junction ATP-dependent DNA helicas K03550     196      330     0.332      190     
mtc:MT2670 Holliday junction DNA helicase RuvA          K03550     196      330     0.332      190     
ooe:OEOE_0577 Holliday junction DNA helicase subunit Ru K03550     194      328     0.302      202     
mta:Moth_1701 Holliday junction DNA helicase subunit Ru K03550     202      328     0.326      184     
smu:SMU_2088 putative Holliday junction DNA helicase Ru K03550     197      327     0.294      201     
tpa:TP_0543 Holliday junction DNA helicase (ruvA)       K03550     227      326     0.340      200     
tde:TDE_1863 Holliday junction DNA helicase RuvA        K03550     201      325     0.337      202     
lin:ruvA highly similar to Holliday junction DNA helica K03550     201      320     0.296      203     
tth:TT_C1696 holliday junction DNA helicase ruvA        K03550     191      319     0.342      199     
fnu:FN1104 Holliday junction DNA helicase ruvA          K03550     194      316     0.307      199     
tma:TM0165 Holliday junction DNA helicase               K03550     191      311     0.320      197     
lpl:lp_2287 holliday junction DNA helicase RuvA         K03550     203      306     0.289      204     
pma:Pro_0754 Holliday junction resolvasome DNA-binding  K03550     222      304     0.328      198     
hpy:HP_0883 Holliday junction DNA helicase (ruvA)       K03550     183      303     0.332      184     
hpj:jhp_0815 HOLLIDAY JUNCTION DNA HELICASE             K03550     183      303     0.332      184     
mva:Mvan_2574 DNA recombination protein RuvA, domain I  K03550     195      302     0.344      192     
rpr:RP385 HOLLIDAY JUNCTION DNA HELICASE RUVA (ruvA)    K03550     199      299     0.327      199     
rco:RC0531 holliday junction DNA helicase RuvA          K03550     203      296     0.333      201     
cje:Cj0799c Holliday junction DNA helicase RuvA         K03550     183      294     0.291      199     
wol:WD_1113 Holliday junction DNA helicase RuvA         K03550     190      263     0.288      198     
lil:LA_2903 holliday junction DNA helicase RuvA         K03550     212      251     0.271      210     
bbu:BB_0023 holliday junction DNA helicase RuvA         K03550     197      235     0.297      128     
mpn:MPN_535 Holliday junction DNA helicase RuvA         K03550     206      191     0.273      194     
mge:MG_358 Holliday junction DNA helicase               K03550     205      165     0.303      145     
afm:AFUA_2G14790 hypothetical protein                             1193      125     0.268      179     
nta:107809939 ribulose-phosphate 3-epimerase, cytoplasm K01783     225      119     0.247      146     
vg:54999134 Microbacterium phage Neferthena; hypothetic            157      118     0.305      118     
cin:100184523 uncharacterized protein LOC100184523                 505      114     0.271      129     
dme:Dmel_CG30499 Ribulose-5-phosphate-3-epimerase, isof K01783     221      111     0.273      132     
ppa:PAS_chr1-3_0257 3-methyl-adenine DNA glycosylase in K01247     278      110     0.318      88      
bmor:101741017 N-glycosylase/DNA lyase isoform X2       K03660     329      107     0.318      85      
ani:ANIA_00845 hypothetical protein                                301      105     0.294      187     

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