SSDB Best Search Result

Entry:sfd:USDA257_c52130 (205 a.a.)
Name:holliday junction ATP-dependent DNA helicase RuvA
KO:K03550 holliday junction DNA helicase RuvA

Search Result : 223 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
sme:SMc03966 Probable holliday junction DNA helicase    K03550     205     1201     0.927      205     
atu:Atu3723 Holliday junction DNA helicase RuvA         K03550     205     1135     0.863      205     
rle:RL3989 putative Holliday junction DNA helicase      K03550     204     1098     0.839      205     
ret:RHE_CH03481 holliday junction DNA helicase protein  K03550     204     1097     0.844      205     
bmf:BAB1_1715 Bacterial DNA recombination protein, RuvA K03550     205     1027     0.790      205     
bms:BR1703 Holliday junction DNA helicase RuvA          K03550     205     1027     0.790      205     
bme:BMEI0333 holliday junction DNA helicase ruva        K03550     205     1027     0.790      205     
mlo:mll3898 Holliday branch migration protein; RuvA     K03550     206      981     0.767      206     
bja:blr1536 holliday junction DNA helicase              K03550     205      858     0.668      205     
sno:Snov_3048 Holliday junction DNA helicase RuvA       K03550     205      842     0.654      205     
xau:Xaut_3067 Holliday junction DNA helicase RuvA       K03550     205      823     0.651      209     
rpa:TX73_005655 Holliday junction branch migration prot K03550     205      811     0.634      205     
azc:AZC_0515 DNA recombination protein                  K03550     206      800     0.623      207     
mea:Mex_1p0739 Holliday junction ATP-dependent DNA heli K03550     208      784     0.630      208     
rru:Rru_A1088 DNA recombination protein RuvA            K03550     212      641     0.516      213     
bhe:BH14900 Holliday junction DNA helicase ruvA         K03550     205      610     0.522      205     
sjp:SJA_C1-00990 Holliday junction resolvasome DNA-bind K03550     202      580     0.510      208     
nar:Saro_0422 Holliday junction DNA helicase RuvA       K03550     204      578     0.512      207     
swi:Swit_2140 Holliday junction DNA helicase RuvA       K03550     199      572     0.474      211     
rcp:RCAP_rcc03217 holliday junction DNA helicase RuvA   K03550     222      560     0.471      221     
sil:SPO3116 Holliday junction DNA helicase RuvA         K03550     224      559     0.468      222     
pde:Pden_0695 Holliday junction DNA helicase RuvA       K03550     223      557     0.477      222     
ccr:CC_3237 Holliday junction DNA helicase RuvA         K03550     205      555     0.466      206     
rsp:RSP_0555 Holliday junction DNA helicase subunit Ruv K03550     224      549     0.464      222     
ssy:SLG_00290 Holliday junction ATP-dependent DNA helic K03550     205      539     0.478      209     
gox:GOX1681 Holliday junction DNA helicase RuvA         K03550     200      506     0.469      211     
rco:RC0531 holliday junction DNA helicase RuvA          K03550     203      489     0.426      202     
zmo:ZMO0155 Holliday junction DNA helicase RuvA         K03550     213      476     0.443      210     
rpr:RP385 HOLLIDAY JUNCTION DNA HELICASE RUVA (ruvA)    K03550     199      464     0.426      202     
pfl:PFL_4764 Holliday junction DNA helicase RuvA        K03550     202      437     0.419      203     
tfu:Tfu_2094 Holliday junction DNA helicase subunit Ruv K03550     202      434     0.418      208     
pae:PA0966 Holliday junction ATP-dependent DNA helicase K03550     201      430     0.411      202     
psb:Psyr_1409 Holliday junction DNA helicase subunit Ru K03550     202      421     0.436      204     
nme:NMB0265 Holliday junction DNA helicase RuvA         K03550     194      416     0.395      205     
pst:PSPTO_3978 Holliday junction DNA helicase RuvA      K03550     202      415     0.426      204     
ppu:PP_1216 Holliday junction ATP-dependent DNA helicas K03550     205      413     0.417      204     
bxe:Bxe_A0616 DNA recombination protein, RuvA           K03550     193      407     0.380      205     
dsy:DSY2467 hypothetical protein                        K03550     201      407     0.394      208     
ngo:NGO_1730 ATP-dependent DNA helicase RuvA            K03550     194      407     0.385      205     
abo:ABO_0752 Holliday junction DNA helicase RuvA        K03550     201      405     0.395      205     
bma:BMA2354 Holliday junction DNA helicase RuvA         K03550     193      405     0.376      205     
bps:BPSL2898 holliday junction DNA helicase             K03550     193      405     0.376      205     
son:SO_2430 Holliday junction DNA helicase RuvA         K03550     205      405     0.371      210     
sen:SACE_2022 Holliday junction DNA helicase            K03550     200      404     0.379      203     
avn:Avin_36700 holliday junction DNA helicase RuvA      K03550     204      402     0.395      205     
amd:AMED_5300 holliday junction DNA helicase RuvA       K03550     198      400     0.395      205     
cgl:Cgl1661 Holliday junction resolvasome DNA-binding s K03550     206      400     0.378      209     
rso:RSc0501 probable holliday junction dna helicase ruv K03550     193      400     0.376      205     
sro:Sros_6112 Holliday junction DNA helicase subunit Ru K03550     206      399     0.398      211     
reu:Reut_A0484 Holliday junction DNA helicase subunit R K03550     193      397     0.378      209     
xom:XOO1545 holliday junction binding protein DNA helic K03550     194      396     0.376      205     
cbo:CBO3071 holliday junction DNA helicase              K03550     197      393     0.366      205     
sml:Smlt3711 putative Holliday junction DNA helicase    K03550     197      392     0.383      206     
cth:Cthe_0181 Holliday junction DNA helicase RuvA       K03550     202      392     0.348      207     
bpe:BP3418 holliday junction DNA helicase               K03550     190      392     0.400      205     
xcc:XCC3025 holliday junction binding protein, DNA heli K03550     194      390     0.376      205     
reh:H16_A0498 holliday junction resolvasome, DNA-bindin K03550     193      388     0.376      205     
xac:XAC3149 holliday junction binding protein DNA helic K03550     194      385     0.371      205     
smar:SM39_2251 component of RuvABC resolvasome, regulat K03550     204      383     0.361      205     
ddd:Dda3937_01621 component of RuvABC resolvasome, regu K03550     205      382     0.351      205     
cvi:CV_4223 holliday junction DNA helicase              K03550     197      382     0.391      207     
brh:RBRH_02062 Holliday junction DNA helicase ruvA      K03550     193      381     0.366      205     
eba:ebA3959 Holliday junction DNA helicase              K03550     199      379     0.364      209     
ccyc:SCMU_22050 Holliday junction ATP-dependent DNA hel K03550     213      378     0.349      209     
yen:YE2393 Holliday junction DNA helicase               K03550     205      378     0.351      205     
enc:ECL_01437 Holliday junction DNA helicase RuvA       K03550     204      377     0.357      207     
sur:STAUR_5780 Holliday junction ATP-dependent DNA heli K03550     203      376     0.389      203     
elm:ELI_3657 Holliday junction DNA helicase RuvA        K03550     203      376     0.351      205     
dde:Dde_2323 Holliday junction DNA helicase RuvA        K03550     201      376     0.374      206     
plu:plu2111 Holliday junction DNA helicase              K03550     205      376     0.361      205     
cpe:CPE1948 holliday junction DNA helicase              K03550     201      376     0.343      210     
sct:SCAT_5304 Holliday junction ATP-dependent DNA helic K03550     207      373     0.388      214     
pam:PANA_2201 RuvA                                      K03550     204      373     0.353      204     
afr:AFE_0061 Holliday junction DNA helicase RuvA        K03550     193      373     0.379      206     
acb:A1S_2587 holliday junction helicase subunit A       K03550     199      373     0.376      205     
eam:EAMY_2064 Holliday junction ATP-dependent DNA helic K03550     204      372     0.363      204     
nfa:NFA_36960 putative Holliday junction DNA helicase B K03550     201      372     0.364      209     
neu:NE0212 probable Holliday junction DNA helicase subu K03550     195      372     0.366      186     
cdn:BN940_14571 Holliday junction DNA helicase RuvA     K03550     194      370     0.382      207     
ype:YPO2057 Holliday junction DNA helicase              K03550     204      370     0.348      204     
esa:ESA_01380 hypothetical protein                      K03550     203      369     0.348      204     
alv:Alvin_0155 Holliday junction DNA helicase RuvA      K03550     211      367     0.358      212     
wol:WD_1113 Holliday junction DNA helicase RuvA         K03550     190      367     0.383      206     
pfr:PFREUD_11710 Holliday junction ATP-dependent DNA he K03550     203      366     0.361      208     
nca:Noca_2386 Holliday junction DNA helicase subunit Ru K03550     200      366     0.380      208     
sat:SYN_02972 holliday junction DNA helicase            K03550     204      366     0.317      205     
lpn:lpg1288 Holliday junction DNA helicase RuvA         K03550     199      366     0.366      205     
vch:VC_1846 Holliday junction DNA helicase RuvA         K03550     204      366     0.340      206     
csa:Csal_1847 Holliday junction DNA helicase subunit Ru K03550     206      364     0.389      203     
yps:YPTB2040 Holliday junction DNA helicase             K03550     226      364     0.343      204     
ypk:y2253 Holliday junction helicase subunit B          K03550     226      364     0.343      204     
cau:Caur_1418 Holliday junction DNA helicase RuvA       K03550     195      362     0.388      183     
kpn:KPN_02376 Holliday junction DNA helicase motor prot K03550     203      362     0.338      204     
kfl:Kfla_4404 Holliday junction DNA helicase RuvA       K03550     199      361     0.377      207     
pmu:PM0977 RuvA                                         K03550     204      361     0.382      204     
apl:APL_0283 holliday junction ATP-dependent DNA helica K03550     201      360     0.363      204     
rha:RHA1_ro06893 holliday junction DNA helicase         K03550     200      359     0.371      205     
xfa:XF_1904 holliday junction binding protein, DNA heli K03550     194      359     0.351      205     
cja:CJA_1030 Holliday junction DNA helicase RuvA        K03550     205      358     0.362      207     
syf:Synpcc7942_2298 Holliday junction DNA helicase subu K03550     207      358     0.358      215     
syc:syc1802_c holliday junction DNA helicase RuvA       K03550     207      358     0.358      215     
gsu:GSU1076 Holliday junction DNA helicase RuvA         K03550     199      358     0.369      206     
mxa:MXAN_4972 Holliday junction DNA helicase RuvA       K03550     202      357     0.369      203     
gme:Gmet_0745 Holliday junction DNA helicase RuvA       K03550     199      357     0.351      205     
cro:ROD_19031 holliday junction ATP-dependent DNA helic K03550     203      354     0.324      204     
scl:sce0297 holliday junction DNA helicase              K03550     244      354     0.384      216     
det:DET0442 Holliday junction DNA helicase RuvA         K03550     194      354     0.387      181     
gpo:GPOL_c22060 holliday junction ATP-dependent DNA hel K03550     198      353     0.340      206     
ral:Rumal_2564 Holliday junction DNA helicase RuvA      K03550     199      353     0.384      211     
aci:ACIAD2614 holliday junction helicase subunit A      K03550     204      352     0.337      205     
hel:HELO_2561 Holliday junction ATP-dependent DNA helic K03550     203      351     0.355      200     
rer:RER_29240 Holliday junction DNA helicase RuvA       K03550     199      351     0.351      205     
mmi:MMAR_2110 Holliday junction DNA helicase RuvA       K03550     197      351     0.371      205     
tex:Teth514_1453 Holliday junction DNA helicase RuvA    K03550     187      351     0.372      188     
mul:MUL_1715 Holliday junction DNA helicase RuvA        K03550     197      351     0.371      205     
cdf:CD630_28060 Holliday junction ATP-dependent DNA hel K03550     200      350     0.371      186     
gvi:glr2884 ORF_ID:glr2884                              K03550     206      350     0.379      190     
ecs:ECs_2571 component of RuvABC resolvasome regulatory K03550     203      350     0.328      204     
eco:b1861 Holliday junction branch migration complex su K03550     203      350     0.328      204     
vpa:VP1051 holliday junction DNA helicase RuvA          K03550     204      349     0.325      206     
vvu:VV1_2159 Holliday junction DNA helicase RuvA        K03550     204      349     0.325      206     
cte:CT0262 Holliday junction DNA helicase RuvA          K03550     201      349     0.348      204     
msm:MSMEG_2944 holliday junction DNA helicase RuvA      K03550     195      348     0.364      206     
cdi:DIP1376 holliday junction DNA-helicase              K03550     203      348     0.350      203     
ksk:KSE_14440 putative Holliday junction ATP-dependent  K03550     203      347     0.361      208     
vfi:VF_0951 component of RuvABC resolvasome, regulatory K03550     207      347     0.330      209     
mab:MAB_2883c Holliday junction DNA helicase RuvA       K03550     202      346     0.346      208     
blo:BL0728 probable holliday junction DNA helicase RuvA K03550     208      346     0.349      212     
hdu:HD_1758 Holliday junction DNA helicase RuvA         K03550     201      346     0.353      204     
sfl:SF1871 Holliday junction DNA helicase RuvA          K03550     203      346     0.328      204     
zga:ZOBELLIA_2376 Holliday junction DNA helicase        K03550     193      345     0.356      205     
cac:CA_C2285 Holliday junction specific DNA helicase, s K03550     201      343     0.337      187     
ctt:CtCNB1_4290 Holliday junction DNA helicase RuvA     K03550     191      342     0.361      205     
stp:Strop_1809 Holliday junction DNA helicase subunit R K03550     200      342     0.351      208     
eca:ECA2492 holliday junction DNA helicase              K03550     205      342     0.322      205     
ctr:CT_501 Holliday junction DNA helicase RuvA          K03550     200      342     0.319      204     
sco:SCO1519 holliday junction DNA helicase              K03550     201      341     0.343      213     
cpy:Cphy_1333 Holliday junction DNA helicase RuvA       K03550     203      339     0.332      184     
sty:STY2103 Holliday junction DNA helicase              K03550     203      339     0.324      204     
stm:STM1895 Holliday junction helicase subunit A        K03550     203      339     0.324      204     
sgr:SGR_6016 putative Holliday junction DNA helicase su K03550     208      337     0.346      211     
sma:SAVERM_6834 putative Holliday junction DNA helicase K03550     203      337     0.337      208     
sgu:SGLAU_06125 Holliday junction ATP-dependent DNA hel K03550     201      336     0.346      214     
pmr:PMI1115 Holliday junction ATP-dependent DNA helicas K03550     207      336     0.333      207     
mca:MCA1222 Holliday junction DNA helicase RuvA         K03550     201      336     0.330      209     
dvu:DVU_2256 Holliday junction DNA helicase RuvA        K03550     202      336     0.340      206     
ctb:CTL0763 holliday junction DNA helicase              K03550     200      332     0.314      204     
bfr:BF3689 Holliday junction DNA helicase RuvA          K03550     201      332     0.333      204     
bth:BT_1978 Holliday junction DNA helicase ruvA         K03550     201      332     0.325      203     
dra:DR_1274 Holliday junction binding protein           K03550     201      331     0.384      203     
cps:CPS_2116 Holliday junction DNA helicase RuvA        K03550     211      329     0.296      213     
ase:ACPL_6534 Holliday junction ATP-dependent DNA helic K03550     200      328     0.348      207     
ttm:Tthe_1567 Holliday junction DNA helicase RuvA       K03550     188      327     0.332      205     
tte:TTE1179 Holliday junction resolvasome DNA-binding s K03550     187      326     0.322      205     
bvu:BVU_1658 Holliday junction DNA helicase ruvA        K03550     197      324     0.353      204     
pjd:Pjdr2_4401 Holliday junction DNA helicase RuvA      K03550     212      323     0.341      214     
pdi:BDI_2660 Holliday junction DNA helicase RuvA        K03550     196      319     0.325      203     
mle:ML0482 Holliday junction DNA helicase component     K03550     203      317     0.345      194     
dds:Ddes_1268 Holliday junction DNA helicase RuvA       K03550     204      316     0.340      206     
hin:HI_0313 Holliday junction DNA helicase (ruvA)       K03550     204      316     0.350      206     
tel:tlr0532 Holliday junction DNA helicase              K03550     210      313     0.376      181     
bha:BH1224 holliday junction DNA helicase               K03550     203      313     0.349      172     
lcb:LCABL_08330 Holliday junction ATP-dependent DNA hel K03550     198      310     0.319      204     
bpf:BpOF4_11660 Holliday junction DNA helicase RuvA     K03550     205      306     0.362      174     
wsu:WS0440 PUTATIVE HOLLIDAY JUNCTION DNA HELICASE      K03550     189      305     0.348      204     
ftu:FTT_0658 holliday junction DNA helicase, subunit A  K03550     217      304     0.297      212     
mva:Mvan_2574 DNA recombination protein RuvA, domain I  K03550     195      303     0.341      205     
tde:TDE_1863 Holliday junction DNA helicase RuvA        K03550     201      302     0.316      190     
tpa:TP_0543 Holliday junction DNA helicase (ruvA)       K03550     227      302     0.321      196     
mtu:Rv2593c Holliday junction ATP-dependent DNA helicas K03550     196      302     0.333      207     
mtc:MT2670 Holliday junction DNA helicase RuvA          K03550     196      302     0.333      207     
lba:Lebu_1880 Holliday junction DNA helicase RuvA       K03550     207      301     0.349      175     
lmo:lmo1533 Holliday junction DNA helicase RuvA         K03550     201      301     0.309      207     
bsu:BSU27740 holliday junction ATP-dependent DNA helica K03550     201      301     0.301      206     
phe:Phep_3832 Holliday junction DNA helicase RuvA       K03550     194      300     0.321      193     
syp:SYNPCC7002_A1270 Holliday junction DNA helicase Ruv K03550     209      299     0.339      186     
gtn:GTNG_2522 Holliday junction DNA helicase RuvA       K03550     194      298     0.326      181     
ljo:LJ_0467 Holliday junction DNA helicase RuvA         K03550     192      297     0.328      192     
chy:CHY_1523 Holliday junction DNA helicase RuvA        K03550     195      295     0.405      131     
lpl:lp_2287 holliday junction DNA helicase RuvA         K03550     203      295     0.308      201     
lin:ruvA highly similar to Holliday junction DNA helica K03550     201      295     0.309      207     
cpn:CPn_0620 Holliday Junction Helicase                 K03550     207      295     0.281      203     
npu:Npun_R3568 Holliday junction DNA helicase RuvA      K03550     228      294     0.345      197     
mar:MAE_10280 holliday junction DNA helicase            K03550     209      294     0.349      186     
ooe:OEOE_0577 Holliday junction DNA helicase subunit Ru K03550     194      292     0.327      205     
cst:CLOST_1317 component of RuvABC resolvasome, regulat K03550     199      290     0.295      207     
afn:Acfer_1529 Holliday junction DNA helicase RuvA      K03550     204      289     0.303      208     
bce:BC4415 Holliday junction DNA helicase ruvA          K03550     205      289     0.328      189     
fnu:FN1104 Holliday junction DNA helicase ruvA          K03550     194      289     0.322      174     
ava:Ava_2820 Holliday junction DNA helicase subunit Ruv K03550     213      288     0.335      197     
ana:all0375 holliday junction DNA helicase              K03550     213      288     0.330      197     
mta:Moth_1701 Holliday junction DNA helicase subunit Ru K03550     202      287     0.306      206     
btk:BT9727_4154 holliday junction DNA helicase          K03550     205      286     0.328      189     
ban:BA_4651 Holliday junction DNA helicase RuvA         K03550     205      286     0.328      189     
anb:ANA_C12944 Holliday junction DNA helicase RuvA      K03550     213      281     0.339      192     
sao:SAOUHSC_01751 Holliday junction DNA helicase RuvA   K03550     200      280     0.335      203     
sau:SA1468 holliday junction DNA helicase               K03550     200      278     0.335      203     
ser:SERP1206 Holliday junction DNA helicase RuvA        K03550     200      277     0.299      204     
fps:FP2122 Holliday junction DNA helicase RuvA          K03550     193      275     0.296      203     
oih:OB2037 holliday junction DNA helicase               K03550     201      274     0.316      209     
efa:EF0066 Holliday junction DNA helicase RuvA          K03550     204      273     0.299      184     
spn:SP_0179 Holliday junction DNA helicase RuvA         K03550     197      271     0.290      207     
pma:Pro_0754 Holliday junction resolvasome DNA-binding  K03550     222      267     0.350      183     
spr:spr0165 Holliday junction DNA helicase              K03550     197      266     0.290      207     
tth:TT_C1696 holliday junction DNA helicase ruvA        K03550     191      265     0.355      203     
cje:Cj0799c Holliday junction DNA helicase RuvA         K03550     183      261     0.284      204     
hpy:HP_0883 Holliday junction DNA helicase (ruvA)       K03550     183      258     0.375      128     
hpj:jhp_0815 HOLLIDAY JUNCTION DNA HELICASE             K03550     183      256     0.367      128     
pgi:PG_0811 Holliday junction DNA helicase RuvA         K03550     202      251     0.323      186     
syn:sll0876 Holliday junction DNA helicase; RuvA        K03550     211      242     0.309      191     
bbu:BB_0023 holliday junction DNA helicase RuvA         K03550     197      240     0.333      156     
llm:llmg_2488 holliday junction DNA helicase ruvA       K03550     197      238     0.295      207     
lla:L0266 DNA helicase RuvA                             K03550     197      236     0.295      207     
spy:SPy_2119 putative Holiday junction DNA helicase     K03550     198      232     0.263      205     
tma:TM0165 Holliday junction DNA helicase               K03550     191      228     0.295      207     
smu:SMU_2088 putative Holliday junction DNA helicase Ru K03550     197      216     0.293      174     
lil:LA_2903 holliday junction DNA helicase RuvA         K03550     212      204     0.258      213     
vg:13405584 Burkholderia phage vB_BceS_KL1; head scaffo            235      135     0.263      213     
mpn:MPN_535 Holliday junction DNA helicase RuvA         K03550     206      118     0.223      184     
mge:MG_358 Holliday junction DNA helicase               K03550     205      110     0.228      184     
pti:PHATRDRAFT_51024 mitotic checkpoint protein with ho K02537     215       98     0.253      154     
dne:112984415 centromere protein M isoform X1           K11505     193       94     0.379      66      
smo:SELMODRAFT_404011 hypothetical protein                         236       94     0.304      112     

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