SSDB Best Search Result

Entry:ssu:SSU05_0684 (1032 a.a.)
Name:type III restriction-modification system, restriction endonuclease subunit
KO:K01156 type III restriction enzyme

Search Result : 178 hits (reference genome only)

                 Entry                                       KO      len   SW-score  identity  overlap  
------------------------------------------------------------------ -------------------------------------
det:DET1114 type III restriction-modification system, r K01156    1019     3092     0.480      1047    
bfr:BF1142 type III restriction-modification system res K01156    1010     2848     0.467      1041    
sat:SYN_01824 type III restriction-modification system  K01156    1025     2810     0.461      1046    
pmu:PM0699 unknown                                      K01156    1043     2778     0.440      1065    
ral:Rumal_1091 Type III site-specific deoxyribonuclease K01156    1036     2773     0.452      1062    
cte:CT0911 type III restriction system endonuclease     K01156     991     2094     0.387      1020    
fnu:FN0417 Type III restriction-modification system res K01156     997     2089     0.370      1050    
cth:Cthe_0518 Type III site-specific deoxyribonuclease  K01156     991     2074     0.384      1043    
dde:Dde_1742 Type III site-specific deoxyribonuclease   K01156     990     2072     0.391      1027    
smar:SM39_2668 type III restriction system endonuclease K01156     986     1977     0.377      1027    
bps:BPSL0043 type III restriction system endonuclease   K01156    1009     1960     0.371      1034    
bma:BMA2673 type III restriction-modification system, r K01156    1009     1951     0.369      1034    
cja:CJA_1582 type III restriction system endonuclease   K01156    1003     1703     0.349      1029    
lba:Lebu_0154 type III restriction protein res subunit  K01156    1022     1623     0.331      1048    
tex:Teth514_1827 type III restriction enzyme, res subun K01156    1032     1587     0.333      1059    
hdu:HD_1690 type III restriction enzyme                 K01156     876     1526     0.349      1064    
apl:APL_0812 type III restriction enzyme                K01156     870     1500     0.347      1044    
ftu:FTT_1579c Type III restriction enzyme               K01156     957     1110     0.286      944     
hpj:jhp_1410 TYPE III RESTRICTION ENZYME                K01156     969     1068     0.283      1039    
hpy:HP_1521 type III restriction enzyme R protein (res) K01156     967     1052     0.282      1044    
vg:2777489 Escherichia phage P1; type III restriction-m K01156     970      897     0.271      1027    
ngo:NGO_0546 restriction endonuclease EcoPI subunit R   K01156     979      895     0.260      1039    
nme:NMB1260 type III restriction-modification system Ec K01156     979      887     0.261      1039    
senr:STMDT2_03541 type III restriction-modification sys K01156     991      630     0.243      1004    
stm:STM0358 DNA restriction (DNA helicase)              K01156     990      630     0.243      1004    
pfa:PF3D7_0402300 reticulocyte binding protein homologu K13849    2971      225     0.209      781     
oas:101105752 centromere-associated protein E isoform X K11498    2692      222     0.210      961     
tva:4761772 A-type inclusion protein-related family               2010      216     0.200      875     
ecb:100062109 kinesin-like protein KIF20B isoform X2    K10402    1822      215     0.214      770     
cfa:477761 kinesin-like protein KIF20B isoform X1       K10402    1802      215     0.238      467     
hsa:9585 kinesin-like protein KIF20B isoform 1          K10402    1820      214     0.217      498     
cge:100764040 kinesin-like protein KIF20B isoform X1    K10402    1777      213     0.209      599     
nve:116620132 early endosome antigen 1-like isoform X1  K12478    1362      210     0.230      547     
mdo:100013897 centromere protein E                      K11498    3401      206     0.212      712     
mcc:696152 kinesin-like protein KIF20B isoform X1       K10402    1822      206     0.213      493     
cpoc:100729462 kinesin-like protein KIF20B isoform X1   K10402    1786      205     0.218      486     
avn:Avin_52330 Type III restriction enzyme, res subunit K01156     923      204     0.230      540     
ser:SERP1013 conserved hypothetical protein                       1145      203     0.198      967     
neu:NE2306 conserved hypothetical protein               K01156     912      201     0.207      550     
fgr:FGSG_06364 hypothetical protein                               1388      200     0.221      511     
ptex:113449514 golgin subfamily A member 4 isoform X1   K20283    1916      198     0.216      676     
ehi:EHI_145970 hypothetical protein                               1424      198     0.208      477     
ddi:DDB_G0286355 myosin II heavy chain                  K10352    2116      197     0.189      813     
eba:ebA2417 hypothetical protein                        K01156     911      196     0.212      575     
cel:CELE_F59A2.6 GRIP domain-containing protein                   1642      196     0.215      752     
cjc:100408202 kinesin-like protein KIF20B isoform X1    K10402    1820      194     0.221      516     
ocu:100339334 kinesin-like protein KIF20B isoform X1    K10402    1798      192     0.219      581     
ptr:450592 kinesin-like protein KIF20B isoform X5       K10402    1822      191     0.217      503     
mca:MCA0026 putative type III restriction-modification  K01156     882      190     0.217      576     
xla:108711140 ankyrin repeat domain-containing protein  K25138    2688      189     0.193      1004    
rfq:117036467 LOW QUALITY PROTEIN: kinesin-like protein K10402    1830      188     0.220      490     
xtr:100496014 polyamine-modulated factor 1-binding prot K23223    1838      184     0.213      849     
pmur:107293214 xin actin-binding repeat-containing prot K27381    3236      183     0.203      645     
ame:551711 kinesin-like protein KIF20B                  K10402    1503      183     0.201      795     
tru:115247252 paramyosin-like                                     1400      180     0.184      797     
tca:663533 rho-associated protein kinase 1              K04514    1365      180     0.168      648     
fps:FP2167 Probable type III restriction enzyme         K01156     897      176     0.192      573     
afn:Acfer_1214 type III restriction protein res subunit K01156     883      175     0.180      787     
dre:100329792 citron Rho-interacting kinase isoform X1  K16308    2119      175     0.207      758     
ola:101156523 girdin isoform X1                         K25392    2044      174     0.206      904     
aag:5570690 coiled-coil domain-containing protein 40    K23730     882      174     0.203      857     
nta:107793731 nuclear matrix constituent protein 1 isof K27866    1188      173     0.226      575     
amj:102574193 coiled-coil domain containing 102A        K16759     550      173     0.213      375     
apla:101800523 filamin-A-interacting protein 1 isoform  K27698    1212      173     0.214      692     
sce:YKL201C Mnn4p                                                 1178      173     0.200      550     
hth:HTH_1617 type III restriction protein res subunit              969      172     0.199      599     
cbo:CBO1211 putative exported protein                              903      172     0.199      805     
mtr:11438969 COP1-interactive protein 1                           1062      171     0.189      525     
dne:112979720 kinesin-like protein KIF20B               K10402    1843      170     0.237      482     
gga:421860 filamin-A-interacting protein 1 isoform X2   K27698    1212      169     0.208      692     
dme:Dmel_CG42390 uncharacterized protein, isoform E               1483      169     0.206      545     
rno:309523 kinesin-like protein KIF20B                  K10402    1773      169     0.202      684     
cje:Cj0139 endonuclease                                 K07452     783      168     0.223      337     
cit:102618223 auxilin-like protein 1 isoform X2                   1382      167     0.191      629     
mja:MJ_0124 type I restriction-modification enzyme 2, R           1075      167     0.210      932     
sly:101264275 nuclear matrix constituent protein 1      K27866    1086      166     0.232      504     
cin:100175102 LOW QUALITY PROTEIN: coiled-coil domain-c K28962     649      164     0.196      629     
cdf:CD630_27170 putative sporulation protein                       847      163     0.230      648     
cdi:DIP1894 Hypothetical protein                        K01156     865      163     0.290      145     
oih:OB2654 serine protein kinase                        K07180     631      162     0.261      371     
clv:102087021 centrosomal protein of 164 kDa            K16462    1899      161     0.195      600     
ppp:112289814 kinesin-like protein KIN-7C, mitochondria K11498    1374      159     0.196      817     
tcr:507831.50 hypothetical protein                                 939      158     0.179      560     
mac:MA_0551 sensory transduction histidine kinase                 1349      158     0.206      669     
fca:101098678 zinc finger protein DZIP1 isoform X1      K16470     855      157     0.206      553     
pfr:PFREUD_21400 Putative type III restriction enzyme   K01156     857      157     0.274      113     
zma:103647191 putative E3 ubiquitin-protein ligase RF4             787      156     0.201      358     
gme:Gmet_0675 hypothetical protein                      K01156     898      156     0.245      188     
ljo:LJ_0616 hypothetical protein                        K03657     764      156     0.199      443     
ath:AT5G46070 Guanylate-binding family protein          K20899    1082      155     0.191      718     
vvi:100248115 uncharacterized protein LOC100248115 isof K23343     545      154     0.216      315     
spu:576882 interaptin isoform X1                        K07532    1874      154     0.219      524     
aor:AO090120000157 unnamed protein product; structural  K22803    1185      153     0.203      849     
csv:101207165 uncharacterized protein LOC101207165 isof            960      152     0.223      560     
btk:BT9727_4770 possible wall-associated protein                  1273      152     0.188      867     
lma:LMJF_28_0610 putative dynein heavy chain            K10408    4241      148     0.212      603     
gmx:102662136 uncharacterized protein DDB_G0290685                 697      145     0.206      378     
pif:PITG_12267 hypothetical protein                                749      145     0.238      383     
tgu:100217534 WD repeat-containing protein 60           K22869    1024      145     0.215      475     
pma:Pro_0996 Predicted inactivated Zn-dependent proteas K03592     459      145     0.198      334     
sshi:J5U23_00508 ISC1476 family transposase             K07496     461      144     0.197      401     
bmor:101745890 uncharacterized protein LOC101745890 iso            437      144     0.207      368     
cac:CA_C1134 Phage related protein, YonF B.subtilis hom            589      144     0.214      555     
bpf:BpOF4_11045 serine protein kinase                   K07180     631      143     0.236      369     
aga:1281206 microfibrillar-associated protein 1         K13110     472      143     0.207      463     
kla:KLLA0_D01958g uncharacterized protein               K17887    1128      143     0.215      508     
cst:CLOST_1046 putative helicase                                  1034      142     0.223      624     
tde:TDE_0890 conserved hypothetical protein                        544      142     0.207      468     
bce:BC3535 IG hypothetical 17116                                   363      142     0.191      362     
tma:TM1346 processing protease, putative                           412      142     0.214      379     
nca:Noca_1086 type III restriction enzyme, res subunit  K01156     840      140     0.272      103     
ban:BA_3590 conserved hypothetical protein                         363      140     0.188      357     
vvu:VV1_1652 hypothetical protein                       K07001     779      140     0.213      507     
xcc:XCC1067 type III restriction-modification enzyme, h K01156    1040      140     0.200      631     
ppa:PAS_chr2-2_0420 Vacuolar membrane protein involved  K27692     704      139     0.219      416     
lmo:lmo2056 hypothetical protein                                   351      138     0.240      342     
mdm:103429351 protein SUPPRESSOR OF GENE SILENCING 3-li            617      137     0.205      458     
eam:EAMY_0850 type III restriction enzyme, res subunit  K01156     901      137     0.312      64      
cpy:Cphy_3484 GTP-binding protein TypA                  K06207     608      137     0.259      170     
gla:GL50803_006007 Ankyrin repeat protein 1                       1015      136     0.198      514     
bta:508902 ubiquitin carboxyl-terminal hydrolase 28     K21122    1081      136     0.200      554     
sil:SPO1443 ATP-dependent RNA helicase RhlE                        471      136     0.240      200     
tgo:29769402 hypothetical protein                                  594      135     0.206      452     
syp:SYNPCC7002_E0035 type III restriction-modification  K01156    1039      135     0.212      538     
xau:Xaut_0549 type III restriction protein res subunit  K01156     890      135     0.256      227     
osa:4344410 ENHANCER OF AG-4 protein 2                            1428      135     0.235      439     
ssc:396799 inter-alpha-trypsin inhibitor heavy chain H4 K24514     921      134     0.223      638     
cal:CAALFM_C107880CA glutamate--cysteine ligase         K11204     772      134     0.210      315     
bpe:BP3117 putative restriction endonuclease            K01156    1039      134     0.191      633     
sot:102580936 putative rRNA methyltransferase           K14857     801      133     0.201      369     
rcp:RCAP_rcc01261 type III restriction-modification sys K01156     869      133     0.339      59      
syf:Synpcc7942_2460 DNA-cytosine methyltransferase      K00558     424      133     0.261      142     
syc:syc1644_d hypothetical protein                      K00558     424      133     0.261      142     
ana:all4518 serine/threonine kinase                     K12132     520      133     0.208      554     
azc:AZC_3259 conserved hypothetical protein             K01156     863      132     0.236      174     
pst:PSPTO_5438 Rhs family protein                                 1572      132     0.194      541     
rpa:TX73_011425 DEAD/DEAH box helicase family protein             1113      131     0.233      210     
mma:MM_0310 hypothetical protein                                   269      131     0.226      257     
lin:lin2162 similar to unknown proteins                            351      130     0.225      342     
pjd:Pjdr2_1334 two component transcriptional regulator, K07720     444      129     0.227      445     
sao:SAOUHSC_01957 hypothetical protein                             262      129     0.213      254     
sai:Saci_1141 conserved Archaeal protein                           257      129     0.228      219     
mmu:381591 LINE-1 type transposase domain-containing pr            782      129     0.200      694     
bha:BH3186 argininosuccinate lyase                      K01755     458      129     0.226      460     
zga:ZOBELLIA_4645 Di-heme cytochrome c peroxidase       K00428     615      128     0.226      235     
sno:Snov_3308 primosomal protein N'                     K04066     729      128     0.183      251     
ava:Ava_3384 serine/threonine protein kinase            K12132     520      128     0.215      558     
spo:2541098 inositol-1,4,5-trisphosphate 5-phosphatase  K20279     889      127     0.219      311     
fvr:FVEG_05822 eukaryotic translation initiation factor K03253     747      126     0.214      364     
smm:Smp_199120 hypothetical protein                                621      126     0.211      540     
smu:SMU_184 putative ABC transporter, metal binding lip K19971     306      126     0.197      233     
sso:SSO3207 Ser/thr protein kinase, putative                       669      126     0.216      416     
mar:MAE_62800 transposase                               K07496     428      125     0.238      324     
rru:Rru_A0242 Type III restriction enzyme, res subunit  K01156    1014      125     0.239      142     
spy:SPy_0669 putative DEAD box family helicase, phage a            527      125     0.272      147     
reh:PHG240 anaerobic class III ribonucleotide reductase K21636     676      123     0.259      143     
csa:Csal_2362 lysine N6-hydroxylase/L-ornithine N5-oxyg K10531     421      123     0.243      309     
ape:APE_1402.1 ABC transporter, ATP binding protein     K02032     344      123     0.237      198     
uma:UMAG_10751 hypothetical protein                     K03141     679      122     0.304      158     
phe:Phep_2777 Xylose isomerase domain protein TIM barre            295      121     0.239      285     
ncr:NCU16896 hypothetical protein                                  839      121     0.238      122     
rpr:RP059 STAGE 0 SPORULATION PROTEIN J (spo0J)         K03497     286      121     0.192      250     
pfl:PFL_4119 putative quinohemoprotein amine dehydrogen K06871     477      120     0.253      166     
pgi:PG_1793 1,4-alpha-glucan branching enzyme           K00700     668      120     0.195      297     
maj:MAA_00410 Protein kinase-like protein                          834      119     0.259      162     
tbr:Tb927.4.4250 UDP-Gal or UDP-GlcNAc-dependent glycos            384      114     0.240      200     
rcu:8270742 transcription factor HEC1                              278      113     0.220      277     
sur:STAUR_2128 Peptide deformylase                      K01462     200      112     0.234      137     
cro:ROD_16801 putative membrane protein                 K08990     353      112     0.234      188     
rle:RL3321 putative dnaJ-like chaperone                 K05801     235      112     0.311      61      
afm:AFUA_5G06905 hypothetical protein                              312      112     0.202      258     
bvu:BVU_3457 hypothetical protein                                  138      111     0.246      122     
vfi:VF_A0764 hypothetical transcriptional regulatory pr            155      107     0.254      122     
amd:AMED_7881 conserved hypothetical protein                       123      103     0.309      97      
pdi:BDI_0935 putative RNA-binding protein rbpA                     123      102     0.328      61      
sml:Smlt1616 putative superoxide dismutase [Fe]         K04564     192      101     0.252      119     
afr:AFE_0765 hypothetical protein                                   37       99     0.485      33      
mgr:MGG_14116 hypothetical protein                                 106       92     0.292      89      

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