SSDB Motif Search Result


Organism : Aeromonas salmonicida subsp. salmonicida A449
Gene : ASA_4020
Definition : K03581 exodeoxyribonuclease V alpha subunit [EC:3.1.11.5] | (GenBank) recD; exodeoxyribonuclease V, alpha subunit
Motif idFromToDefinitionE valueScore
pf:RecD_N12117 4.2e-19-
pf:T2SSE222260Type II/IV secretion system protein 0.18-
pf:AAA_30223386AAA domain 3.3e-27-
pf:AAA_19224376AAA domain 2.7e-34-
pf:UvrD-helicase224314UvrD/REP helicase N-terminal domain 4.2e-06-
pf:AAA_11225287AAA domain 7.4e-05-
pf:AAA_16230364AAA ATPase domain 0.00024-
pf:nSTAND3232264 0.013-
pf:AAA_22234368AAA domain 4.4e-06-
pf:CbiA237263CobQ/CobB/MinD/ParA nucleotide binding domain 0.083-
pf:SLFN-g3_helicase237288 0.2-
pf:NAT10_TcmA_helicase238357 5.4e-09-
pf:AAA_28238255AAA domain 0.083-
pf:NTPase_1238265NTPase 0.15-
pf:SRP54238262SRP54-type protein, GTPase domain 0.22-
pf:MobB239266Molybdopterin guanine dinucleotide synthesis protein B 0.8-
pf:AAA_11321375AAA domain 0.11-
pf:TraI_hel_assoc_N336366 0.33-
pf:SH3_13523580 5e-07-
pf:Viral_helicase1599648Viral (Superfamily 1) RNA helicase 0.00072-
pf:UvrD_C_2601643UvrD-like helicase C-terminal domain 1.1e-12-

asa:ASA_4020 pf:RecD_N pf:T2SSE pf:AAA_30 pf:AAA_19 pf:UvrD-helicase pf:AAA_11 pf:AAA_16 pf:nSTAND3 pf:AAA_22 pf:CbiA pf:SLFN-g3_helicase pf:NAT10_TcmA_helicase pf:AAA_28 pf:NTPase_1 pf:SRP54 pf:MobB pf:AAA_11 pf:TraI_hel_assoc_N pf:SH3_13 pf:Viral_helicase1 pf:UvrD_C_2

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