| Motif id | From | To | Definition | E value | Score |
| pf:zf-UBP_var | 11 | 73 | | 9.7e-22 | - |
| pf:DUF3970 | 47 | 73 | Protein of unknown function (DUF3970)
| 0.49 | - |
| pf:zf-UBP | 180 | 253 | Zn-finger in ubiquitin-hydrolases and other protein
| 1.2e-18 | - |
| pf:UCH | 308 | 793 | Ubiquitin carboxyl-terminal hydrolase
| 1.6e-43 | - |
| pf:UCH_1 | 404 | 776 | Ubiquitin carboxyl-terminal hydrolase
| 0.00021 | - |
| pf:UBA_7 | 615 | 662 | | 2.3e-21 | - |
| pf:UBA | 615 | 651 | UBA/TS-N domain
| 1e-08 | - |
| pf:UBA | 671 | 706 | UBA/TS-N domain
| 2.5e-09 | - |
| pf:UBA_7 | 672 | 714 | | 1.1e-10 | - |
| pf:UBA_DHX29 | 677 | 707 | | 0.49 | - |
| pf:UBA_8 | 685 | 710 | | 0.058 | - |
| pf:UBA_4 | 686 | 713 | UBA-like domain
| 0.062 | - |